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Results for CCDC71

Gene Name Gene ID Reads Annotation
CCDC71 CCDC71 2442










Genes with expression patterns similar to CCDC71

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CCDC71 CCDC71 2442 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. snrpe ENSDARG00000033175 7462 2.584 - - - - 0.979 - - 0.719 0.886 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
3. ppp4r2b ENSDARG00000053447 2506 2.451 - 0.735 - - 0.951 0.765 - - - protein phosphatase 4, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3008]
4. acbd6 ENSDARG00000039456 2355 2.445 - - - - 0.980 0.726 0.739 - - acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
5. BX511086.1 BX511086.1 8308 2.279 - 0.723 - - - 0.730 0.826 - -
6. ilf3b ENSDARG00000105177 9473 2.232 - - - - - - 0.803 0.704 0.725 interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
7. ANKRD11 ENSDARG00000051886 10024 2.219 - 0.727 - - - 0.773 0.719 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
8. git2b ENSDARG00000042791, ENSDARG00000111846 1332 1.961 - - - - 0.982 - - - 0.979 G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
9. maf1 ENSDARG00000013122 3365 1.946 - - - - 0.976 - - - 0.970 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
10. commd4 ENSDARG00000061946 3281 1.944 - - - - 0.977 - - - 0.967 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
11. arl14ep ENSDARG00000001210 3029 1.862 - - - - 0.977 - - - 0.885 ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
12. timm10 ENSDARG00000069116 4459 1.856 - - - - 0.948 - - - 0.908 translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
13. si:ch211-10d23.5 ENSDARG00000095510 2632 1.853 - - - - - 0.880 - - 0.973 si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
14. cwc22 ENSDARG00000014008 2385 1.833 - 0.857 - - 0.976 - - - - CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
15. cpsf3 ENSDARG00000027649 6897 1.821 - - - - 0.915 - - - 0.906 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
16. lman2 ENSDARG00000061854 6251 1.806 - - - - 0.844 - - - 0.962 lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
17. col16a1 ENSDARG00000009194 5600 1.795 - - - - 0.975 - - - 0.820 collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
18. gstm3 gstm3 1164 1.794 - 0.819 - - - - - - 0.975
19. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.783 - - - - 0.961 - 0.822 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
20. ppa1b ENSDARG00000030441 9027 1.772 - - - - 0.903 - - - 0.869 pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
21. pbx1a ENSDARG00000100494 854 1.754 - - - - 0.983 - 0.771 - - pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]
22. utp11l ENSDARG00000039958, ENSDARG00000109895 1509 1.738 - - - - - - 0.758 - 0.980 UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-8093]
23. ppig ENSDARG00000044431 3427 1.732 - - 0.749 - - - - - 0.983 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
24. cbl ENSDARG00000009958 1321 1.73 - - - - - 0.748 - - 0.982 Cbl proto-oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041114-207]
25. mri1 ENSDARG00000075754 2567 1.729 - - - - - - 0.757 - 0.972 methylthioribose-1-phosphate isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-080204-109]
26. rnd3a ENSDARG00000076799 4705 1.728 - - - - 0.979 0.749 - - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
27. KIF4A KIF4A 3322 1.713 - - - - 0.984 - 0.729 - -
28. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.71 - - - - 0.974 - 0.736 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
29. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.702 - - - - 0.965 - 0.737 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
30. CCNA2 ENSDARG00000011094 3996 1.701 - 0.769 - - 0.932 - - - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
31. TRMT10A ENSDARG00000036678 621 1.7 - - - - - - 0.730 - 0.970 tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]
32. ifrd2 ENSDARG00000036811, ENSDARG00000115385 3697 1.698 - 0.723 - - 0.975 - - - - interferon-related developmental regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-140]
33. tfdp1b ENSDARG00000016304 3071 1.697 - 0.720 - - - - - - 0.977 transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
34. tpt1 ENSDARG00000092693 1110 1.693 - 0.716 - - 0.977 - - - - tumor protein, translationally-controlled 1 [Source:ZFIN;Acc:ZDB-GENE-990603-10]
35. wasf3 wasf3 3287 1.687 - - - - - - 0.733 - 0.954
36. srcap ENSDARG00000005236 1740 1.683 - - - - 0.980 - 0.703 - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
37. phrf1 ENSDARG00000075252 1982 1.677 - 0.762 - - - - - - 0.915 PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-624]
38. stxbp1a ENSDARG00000001994 5154 1.676 - - - - 0.951 - 0.725 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
39. nudt3a ENSDARG00000016256 2713 1.673 - - - - 0.969 - 0.704 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
40. arhgdia ENSDARG00000043795 14642 1.671 - - - - 0.942 - - - 0.729 Rho GDP dissociation inhibitor (GDI) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2816]
41. nfyba ENSDARG00000039185 1804 1.67 - - - - 0.952 - 0.718 - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
42. snrpa ENSDARG00000018890 4593 1.665 - - - - 0.916 0.749 - - - small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
43. pvrl3l pvrl3l 943 1.662 - - - - - - 0.700 - 0.962
44. aip ENSDARG00000104437 3574 1.646 - 0.713 - - 0.933 - - - - aryl hydrocarbon receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-6735]
45. kpna3 ENSDARG00000052641 5347 1.641 - - - - - 0.714 - - 0.927 karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
46. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.639 - - - - - - 0.709 - 0.930 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
47. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.623 - 0.772 - - - - 0.851 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
48. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 1.62 - - - - - - 0.771 - 0.849 patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
49. ubr5 ENSDARG00000018192 9267 1.595 - - 0.712 - - - 0.883 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
50. snrpc ENSDARG00000009871 9567 1.592 - - - - 0.874 - 0.718 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
51. ssbp4 ENSDARG00000056483 10196 1.59 - - - - 0.810 - 0.780 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
52. tm2d3 ENSDARG00000076618 2310 1.576 - - - - - - 0.811 - 0.765 TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
53. camsap2 camsap2 1448 1.572 - 0.840 - - - - 0.732 - -
54. trip13 ENSDARG00000025043 796 1.562 - 0.789 - - - 0.773 - - - thyroid hormone receptor interactor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1488]
55. asb7 ENSDARG00000006494 1387 1.556 - - - - - - 0.834 0.722 - ankyrin repeat and SOCS box containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2429]
56. DTX4 ENSDARG00000076302 2642 1.556 - - - - - - 0.759 - 0.797 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
57. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.552 - - - - - - 0.834 0.718 - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
58. gap43 ENSDARG00000099744 4114 1.538 - - - - - - 0.814 0.724 - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
59. prmt1 ENSDARG00000010246 11311 1.536 0.748 - - - - - - - 0.788 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
60. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.532 - - - - - - 0.765 0.767 - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
61. CABZ01038493.1 ENSDARG00000117625 983 1.522 - 0.785 - - - 0.737 - - -
62. si:ch211-209j10.6 ENSDARG00000093317 126 1.514 - 0.782 - - - 0.732 - - - si:ch211-209j10.6 [Source:ZFIN;Acc:ZDB-GENE-090311-44]
63. chd7 ENSDARG00000075211 12085 1.51 - - - - - 0.721 0.789 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
64. negr1 ENSDARG00000021607 1051 1.504 - 0.732 - - - - 0.772 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
65. ncana 1537 1.503 0.738 - - - - - 0.765 - - neurocan a
66. ABR_1 ABR_1 926 1.501 0.702 0.799 - - - - - - -
67. arid2 ENSDARG00000007413 4413 1.492 - - - - - 0.766 0.726 - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
68. map2 ENSDARG00000055052 6062 1.49 0.714 - - - - - 0.776 - - microtubule-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-041010-118]
69. ybx1 ENSDARG00000004757 916 1.488 - 0.733 - - - 0.755 - - - Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]
70. gapdhs ENSDARG00000039914 8760 1.488 - 0.729 - - - - - - 0.759 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
71. prpf8 ENSDARG00000026180 7026 1.487 - - 0.728 - - - - - 0.759 pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
72. FP016176.1 FP016176.1 7030 1.485 0.712 - - - - - 0.773 - -
73. h3f3a 66671 1.484 - - - - - - 0.762 0.722 - H3 histone, family 3A, transcript variant X1
74. pou3f3a ENSDARG00000042032 2835 1.483 0.758 - - - - - 0.725 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
75. fam131bb ENSDARG00000070575 1054 1.483 - - - - - - 0.734 0.749 - family with sequence similarity 131, member Bb [Source:ZFIN;Acc:ZDB-GENE-100922-12]
76. cdkn1c cdkn1c 17427 1.481 0.738 - - - - - 0.743 - -
77. prr18 ENSDARG00000093768 409 1.48 - 0.735 - - - - 0.745 - - proline rich 18 [Source:ZFIN;Acc:ZDB-GENE-081107-6]
78. ppme1 ENSDARG00000009771 1697 1.474 0.740 - - - - - 0.734 - - protein phosphatase methylesterase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7064]
79. CABZ01051991.1 CABZ01051991.1 346 1.473 0.755 - - - - - 0.718 - -
80. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 1.472 0.732 - - - - - 0.740 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
81. hoxa3a ENSDARG00000103862 2239 1.47 0.739 - - - - - 0.731 - - homeobox A3a [Source:ZFIN;Acc:ZDB-GENE-000823-3]
82. DUSP8 DUSP8 442 1.468 - 0.763 - - - - 0.705 - -
83. pfn2l ENSDARG00000012682 21690 1.466 - - - - 0.744 - 0.722 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
84. zgc:77086 ENSDARG00000014015 4908 1.462 0.756 0.706 - - - - - - - zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
85. napg napg 645 1.46 - 0.738 - - - - 0.722 - -
86. sox19b ENSDARG00000040266 532 1.459 0.755 - - - - - 0.704 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
87. PPP1R9B PPP1R9B 855 1.459 0.733 - - - - - 0.726 - -
88. FBXO38 ENSDARG00000006924 307 1.453 - - - - - 0.750 0.703 - - F-box protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-2797]
89. anp32e ENSDARG00000054804 11017 1.453 0.722 - - - - - 0.731 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
90. usp5 ENSDARG00000014517, ENSDARG00000114598 1969 1.443 - - 0.709 - - - 0.734 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
91. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.44 - - - - - - 0.712 0.728 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
92. wu:fb30e12 wu:fb30e12 1254 1.437 - 0.735 - - - - 0.702 - -
93. TNRC6C_2 TNRC6C_2 2444 1.435 - - 0.705 - - - 0.730 - -
94. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.432 0.706 - - - - - 0.726 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
95. med20 ENSDARG00000046006 614 1.431 - - - - - 0.727 0.704 - - mediator complex subunit 20 [Source:ZFIN;Acc:ZDB-GENE-040801-104]
96. C24H17orf96 C24H17orf96 1538 1.425 - - - - - 0.704 0.721 - -
97. vps4a ENSDARG00000030114 933 1.425 - 0.704 - - - - 0.721 - - vacuolar protein sorting 4a homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-388]
98. psma5 ENSDARG00000003526, ENSDARG00000116794 5106 1.425 0.711 - - - - - - 0.714 - proteasome subunit alpha 5 [Source:ZFIN;Acc:ZDB-GENE-040625-96]
99. cnn3b ENSDARG00000029856 4807 1.416 - - - - - 0.711 0.705 - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
100. ppip5k2 ENSDARG00000078441 1074 0.987 - - - - 0.987 - - - - diphosphoinositol pentakisphosphate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-091204-125]

There are 1377 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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