Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CCDC61

Gene Name Gene ID Reads Annotation
CCDC61 ENSDARG00000062307 582 coiled-coil domain containing 61 [Source:ZFIN;Acc:ZDB-GENE-060929-348]










Genes with expression patterns similar to CCDC61

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CCDC61 ENSDARG00000062307 582 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 61 [Source:ZFIN;Acc:ZDB-GENE-060929-348]
2. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 2.268 0.724 - - 0.803 - 0.741 - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
3. memo1 ENSDARG00000010823 1681 1.723 - - - 0.827 - 0.896 - - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
4. ENSDARG00000092971 ENSDARG00000092971 563 1.668 - - - 0.802 - - 0.866 - -
5. C24H8orf33 C24H8orf33 406 1.634 - - - 0.779 - - 0.855 - -
6. si:ch211-133l11.10 ENSDARG00000005626 381 1.604 - - - 0.828 - 0.776 - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
7. si:ch211-282k23.2 ENSDARG00000093591 447 1.604 - - - - - 0.803 - 0.801 - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
8. bmp4 ENSDARG00000019995 2038 1.604 - - - 0.764 - 0.840 - - - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
9. spop ENSDARG00000100519 177 1.603 - - - 0.809 - - - 0.794 - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
10. CU179656.1 ENSDARG00000107086 270 1.596 0.758 - - - - - 0.838 - -
11. gpsm1b ENSDARG00000054874 1308 1.594 - - - - - 0.881 - 0.713 - G protein signaling modulator 1b [Source:ZFIN;Acc:ZDB-GENE-110203-5]
12. zgc:171459 ENSDARG00000077248 224 1.585 - - - 0.770 - - - 0.815 - zgc:171459 [Source:ZFIN;Acc:ZDB-GENE-030131-2059]
13. entpd3 ENSDARG00000035309 263 1.585 0.771 - - - - 0.814 - - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
14. nol10 ENSDARG00000020077 984 1.584 - - - 0.774 - - 0.810 - - nucleolar protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-764]
15. ercc2 ENSDARG00000021985 678 1.582 - - - - - 0.763 - 0.819 - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
16. erbb2ip 403 1.571 - - - 0.812 - 0.759 - - - erbb2 interacting protein, transcript variant X3
17. PTGIR ENSDARG00000038278 254 1.564 - 0.823 - - - - - 0.741 - prostaglandin I2 receptor [Source:ZFIN;Acc:ZDB-GENE-120511-1]
18. HELZ2_1 ENSDARG00000012600 53 1.554 - - - 0.801 - 0.753 - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
19. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.553 - 0.704 - 0.849 - - - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
20. NECAB3 ENSDARG00000074794 379 1.551 - - - 0.739 - 0.812 - - - N-terminal EF-hand calcium binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-74]
21. SERTAD4 ENSDARG00000089795 791 1.551 - - - 0.714 - - 0.837 - - SERTA domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-090313-199]
22. CU570681.1 CU570681.1 512 1.551 - - - 0.700 - 0.851 - - -
23. FP102071.1 ENSDARG00000097994 170 1.547 - - - - - 0.788 0.759 - - si:ch211-87j1.7 [Source:NCBI gene;Acc:103909886]
24. krit1 ENSDARG00000098916 431 1.542 - - - - - 0.752 0.790 - - KRIT1, ankyrin repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-555]
25. chst13 chst13 669 1.535 0.715 - - - - 0.820 - - -
26. BX088524.2 ENSDARG00000103268 564 1.526 - - - - - 0.767 - 0.759 -
27. C11H1orf106 C11H1orf106 263 1.526 - 0.769 - - - - 0.757 - -
28. nr2c1 ENSDARG00000045527, ENSDARG00000111803 741 1.524 - 0.786 - - - - 0.738 - - nuclear receptor subfamily 2, group C, member 1 [Source:ZFIN;Acc:ZDB-GENE-041210-198]
29. efr3a_1 ENSDARG00000005163, ENSDARG00000115083 571 1.519 - - - 0.708 - 0.811 - - - EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
30. kcnc1a ENSDARG00000051852 317 1.518 0.715 - - - - - - 0.803 - potassium voltage-gated channel, Shaw-related subfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-061220-10]
31. syt9a ENSDARG00000003994 298 1.518 0.710 - - - - 0.808 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
32. sacs ENSDARG00000091042 314 1.517 - 0.758 - - - 0.759 - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
33. BACH1 BACH1 1021 1.517 - 0.742 - - - 0.775 - - -
34. CU463790.1 CU463790.1 60 1.511 - - - - - 0.759 0.752 - -
35. ankfy1 ENSDARG00000061013, ENSDARG00000111387 952 1.511 - - - - - 0.798 0.713 - - ankyrin repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041222-1]
36. gpr146 ENSDARG00000059610 810 1.51 0.734 - - 0.776 - - - - - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
37. polr2j ENSDARG00000035146 1493 1.508 - - - - - 0.751 - 0.757 - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
38. wnt11r ENSDARG00000014796 2860 1.504 0.722 - - - - 0.782 - - - wingless-type MMTV integration site family, member 11, related [Source:ZFIN;Acc:ZDB-GENE-980526-249]
39. tmem201 ENSDARG00000077307 453 1.503 - - - - - 0.742 - 0.761 - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
40. tnika ENSDARG00000056218 728 1.501 0.733 - - - - 0.768 - - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
41. nelfcd ENSDARG00000021097 676 1.497 - - - - - - 0.780 0.717 - negative elongation factor complex member C/D [Source:ZFIN;Acc:ZDB-GENE-040426-720]
42. b4galt7 ENSDARG00000021899 546 1.49 - 0.770 - - - 0.720 - - - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
43. ppp2r5d ENSDARG00000014428 771 1.488 - - - 0.730 - 0.758 - - - protein phosphatase 2, regulatory subunit B', delta [Source:ZFIN;Acc:ZDB-GENE-040426-2568]
44. IRS2 IRS2 485 1.488 - - - - - - 0.723 0.765 -
45. PAXBP1 ENSDARG00000062361 626 1.488 - - - 0.716 - 0.772 - - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
46. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1.484 0.700 - - - - 0.784 - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
47. tcea2 ENSDARG00000012927 440 1.483 - - - - - - 0.715 0.768 - transcription elongation factor A (SII), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-985]
48. znf592 ENSDARG00000060885 776 1.482 - 0.752 - - - 0.730 - - - zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
49. lysmd3 ENSDARG00000024693 754 1.48 - 0.719 - - - - 0.761 - - LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
50. cyp26a1 ENSDARG00000033999 1136 1.478 - - - - - 0.768 0.710 - - cytochrome P450, family 26, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-990415-44]
51. uros ENSDARG00000027491 1147 1.472 - 0.709 - - - 0.763 - - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
52. ppp3ca ENSDARG00000004988 615 1.468 0.719 - - - - 0.749 - - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
53. tmem178 ENSDARG00000020758 77 1.468 0.756 - - - - 0.712 - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
54. aplp1 ENSDARG00000098368 2317 1.456 - - - 0.726 - 0.730 - - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
55. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.452 - 0.715 - - - 0.737 - - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
56. clgn ENSDARG00000009315 993 1.451 - - - - - 0.701 - 0.750 - calmegin [Source:ZFIN;Acc:ZDB-GENE-060929-708]
57. map2k2b ENSDARG00000068918 676 1.447 - - - - - 0.727 0.720 - - mitogen-activated protein kinase kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080219-34]
58. cd276 ENSDARG00000003061 2798 1.442 - 0.715 - - - - - - 0.727 CD276 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-452]
59. SLC29A4 ENSDARG00000059690 470 1.439 0.701 - - - - 0.738 - - - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
60. PCYOX1L ENSDARG00000069003 420 0.93 - - - 0.930 - - - - - prenylcysteine oxidase 1 like [Source:ZFIN;Acc:ZDB-GENE-141212-302]
61. pdrg1 ENSDARG00000045017 628 0.929 - - - 0.929 - - - - - p53 and DNA-damage regulated 1 [Source:ZFIN;Acc:ZDB-GENE-050417-276]
62. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 0.925 - - - - - 0.925 - - - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
63. lmx1ba ENSDARG00000104815 376 0.924 - - - 0.924 - - - - - LIM homeobox transcription factor 1, beta a [Source:ZFIN;Acc:ZDB-GENE-050114-3]
64. TULP3 TULP3 433 0.92 - - - - - 0.920 - - -
65. sppl2 ENSDARG00000030448 1040 0.918 - - - - - 0.918 - - - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
66. prr14 ENSDARG00000089232 495 0.912 - - - 0.912 - - - - - proline rich 14 [Source:ZFIN;Acc:ZDB-GENE-030131-3785]
67. C3H17orf75 C3H17orf75 432 0.908 - - - 0.908 - - - - -
68. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 0.906 - - - - - 0.906 - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
69. EHBP1 ENSDARG00000043643 966 0.905 - - - - - 0.905 - - - EH domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091006-4]
70. SPAG17 SPAG17 31 0.902 - - - - - - 0.902 - -
71. CNGB1 CNGB1 40 0.902 - - - - - - 0.902 - -
72. tceb3 40 0.902 - - - - - - 0.902 - - transcription elongation factor B (SIII), polypeptide 3
73. si:dkey-3d18.4 si:dkey-3d18.4 43 0.902 - - - - - - 0.902 - -
74. zfpl1 ENSDARG00000103453 860 0.899 - - - - - 0.899 - - - zinc finger protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1255]
75. rhbdl1 ENSDARG00000087040 23 0.898 - - - - - - 0.898 - - rhomboid, veinlet-like 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120529-2]
76. cox4i2 ENSDARG00000022509 362 0.897 - - - - - - 0.897 - - cytochrome c oxidase subunit 4I2 [Source:ZFIN;Acc:ZDB-GENE-040426-1775]
77. cmah ENSDARG00000057714 852 0.897 - - - - - - 0.897 - - cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:ZFIN;Acc:ZDB-GENE-040704-33]
78. mcf2la ENSDARG00000075859 882 0.894 0.894 - - - - - - - - mcf.2 cell line derived transforming sequence-like a [Source:ZFIN;Acc:ZDB-GENE-090312-122]
79. rpl37_1 ENSDARG00000034291, ENSDARG00000076360 365 0.894 - - - - - - 0.894 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
80. si:dkey-5n7.2 ENSDARG00000102339 42 0.893 - - - - - - 0.893 - - si:dkey-5n7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-254]
81. snap25b ENSDARG00000058117 469 0.893 - - - 0.893 - - - - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
82. si:ch211-76l23.4 ENSDARG00000096242 202 0.892 - - - - - - 0.892 - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
83. upk3l upk3l 61 0.892 - - - - - - 0.892 - -
84. zgc:174224_1 ENSDARG00000093875 7 0.892 - - - - - - 0.892 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
85. AL844186.1 ENSDARG00000114351 41 0.892 - - - - - - 0.892 - -
86. apnl ENSDARG00000090900 21 0.892 - - - - - - 0.892 - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
87. si:dkey-153n9.5 si:dkey-153n9.5 20 0.892 - - - - - - 0.892 - -
88. LIX1 ENSDARG00000052154 9 0.892 - - - - - - 0.892 - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
89. chmp2ba ENSDARG00000068683, ENSDARG00000113182, ENSDARG00000114167 20 0.892 - - - - - - 0.892 - - charged multivesicular body protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070628-3]
90. zgc:110782 ENSDARG00000044544 48 0.892 - - - - - - 0.892 - - zgc:110782 [Source:ZFIN;Acc:ZDB-GENE-050320-51]
91. zgc:172065 ENSDARG00000078093 2 0.892 - - - - - - 0.892 - - zgc:172065 [Source:ZFIN;Acc:ZDB-GENE-080214-2]
92. trim35-37 trim35-37 2 0.892 - - - - - - 0.892 - -
93. cryba2a ENSDARG00000030349 1342 0.892 - - - - - - 0.892 - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
94. GOLT1A ENSDARG00000088933 14 0.892 - - - - - - 0.892 - - golgi transport 1A [Source:ZFIN;Acc:ZDB-GENE-141212-320]
95. BX927369.7 BX927369.7 12 0.892 - - - - - - 0.892 - -
96. btr09 ENSDARG00000054805, ENSDARG00000115798 20 0.892 - - - - - - 0.892 - - bloodthirsty-related gene family, member 9 [Source:ZFIN;Acc:ZDB-GENE-080722-46]
97. slc22a5 ENSDARG00000101021 20 0.892 - - - - - - 0.892 - - solute carrier family 22 (organic cation/carnitine transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-091012-1]
98. hbl3 11 0.892 - - - - - - 0.892 - - hexose-binding lectin 3, transcript variant X1
99. inhbab ENSDARG00000024759 29 0.892 - - - - - - 0.892 - - inhibin subunit beta Ab [Source:ZFIN;Acc:ZDB-GENE-050525-2]
100. myo10l1 ENSDARG00000074723 21 0.892 - - - - - - 0.892 - - myosin X-like 1 [Source:ZFIN;Acc:ZDB-GENE-080425-1]

There are 1531 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA