Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC6

Gene Name Gene ID Reads Annotation
CCDC6 ENSGALG00000003165 93 coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]











Genes with expression patterns similar to CCDC6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCDC6 ENSGALG00000003165 93 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
2. TRIM2 ENSGALG00000009207 44 1.6 - - - 0.825 - - - - - 0.775 tripartite motif containing 2 [Source:NCBI gene;Acc:100857562]
3. DSL1 DSL1 113 1.591 - - - - 0.887 - - 0.704 - -
4. CFTR ENSGALG00000032986 424 1.525 - - - - 0.773 0.752 - - - - cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
5. SLC7A11 ENSGALG00000009758 104 1.519 - - - - - 0.796 - 0.723 - - solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]
6. STON2 ENSGALG00000010579 76 0.995 - - - - 0.995 - - - - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
7. PAQR8 ENSGALG00000016675 85 0.994 - - - - 0.994 - - - - - progestin and adipoQ receptor family member 8 [Source:NCBI gene;Acc:422042]
8. CECR1 336 0.99 - - - - 0.990 - - - - - cat eye syndrome chromosome region, candidate 1, transcript variant X2
9. ASTE1 ENSGALG00000036171 155 0.989 - - - - 0.989 - - - - - asteroid homolog 1 (Drosophila), transcript variant X3
10. KCNC4 ENSGALG00000000400 129 0.985 - - - - 0.985 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
11. CLIC3 ENSGALG00000038789 233 0.982 - - - - 0.982 - - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
12. CSPP1 1756 0.98 - - - - 0.980 - - - - - centrosome and spindle pole associated protein 1
13. SRSF4 1200 0.979 - - - - 0.979 - - - - - serine and arginine rich splicing factor 4, transcript variant X2
14. FAM171B ENSGALG00000002646 837 0.976 - - - - 0.976 - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
15. SPSB3 ENSGALG00000002285 1329 0.975 - - - - 0.975 - - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
16. PPTC7 ENSGALG00000004550 154 0.972 - - - - 0.972 - - - - - PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
17. MOCS3 ENSGALG00000007986 308 0.967 - - - - 0.967 - - - - - molybdenum cofactor synthesis 3 [Source:HGNC Symbol;Acc:HGNC:15765]
18. BBX ENSGALG00000015353 1281 0.967 - - - - 0.967 - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
19. CANT1 ENSGALG00000011822 2218 0.966 - - - - 0.966 - - - - - calcium activated nucleotidase 1 [Source:NCBI gene;Acc:430103]
20. TAC1 ENSGALG00000009737 2211 0.965 - - - - 0.965 - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
21. DUS2 856 0.963 - - - - 0.963 - - - - - dihydrouridine synthase 2, transcript variant X2
22. CMTM3 ENSGALG00000000424 393 0.96 - - - - 0.960 - - - - - CKLF like MARVEL transmembrane domain containing 3 [Source:NCBI gene;Acc:414829]
23. ENSGALG00000022967 ENSGALG00000022967 240 0.958 - - - - 0.958 - - - - -
24. TEF ENSGALG00000011958 375 0.956 - - - - 0.956 - - - - - TEF, PAR bZIP transcription factor [Source:NCBI gene;Acc:396342]
25. PLEKHB1 ENSGALG00000017321 443 0.955 - - - - 0.955 - - - - - pleckstrin homology domain containing B1 [Source:NCBI gene;Acc:419064]
26. B3GAT2 ENSGALG00000031590 615 0.953 - - - - 0.953 - - - - - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
27. KCNB1 ENSGALG00000004758 620 0.952 - - - - 0.952 - - - - - potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
28. GGA.10540 GGA.10540 3324 0.952 - - - - 0.952 - - - - -
29. Sep-03 Sep-03 109 0.952 - - - - - 0.952 - - - -
30. BCMO1 BCMO1 35 0.951 - - - - - 0.951 - - - -
31. TMEM201 ENSGALG00000002527 2 0.951 - - - - - 0.951 - - - - transmembrane protein 201
32. PEX26 ENSGALG00000019286 1 0.951 - - - - - 0.951 - - - - peroxisomal biogenesis factor 26 [Source:HGNC Symbol;Acc:HGNC:22965]
33. ABI3BP ENSGALG00000015307 4 0.951 - - - - - 0.951 - - - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
34. ENSGALG00000020320 ENSGALG00000020320 1 0.951 - - - - - 0.951 - - - -
35. GPR158 ENSGALG00000007667 111 0.951 - - - - 0.951 - - - - - G protein-coupled receptor 158 [Source:NCBI gene;Acc:100859400]
36. KCNQ3 ENSGALG00000037626 6 0.951 - - - - - 0.951 - - - - potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
37. OLIG3 ENSGALG00000013862 51 0.951 - - - - - 0.951 - - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
38. ENSGALG00000006495 ENSGALG00000006495 4 0.951 - - - - - 0.951 - - - -
39. ITGAV ENSGALG00000002655 26 0.951 - - - - - 0.951 - - - - integrin subunit alpha V [Source:NCBI gene;Acc:396420]
40. ENSGALG00000025912 ENSGALG00000025912 4 0.951 - - - - - 0.951 - - - -
41. RAB4A ENSGALG00000036218 20 0.951 - - - - - 0.951 - - - - RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
42. ANKFN1 ENSGALG00000003105 15 0.951 - - - - - 0.951 - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
43. DPP7 ENSGALG00000038145 4888 0.951 - - - - 0.951 - - - - - dipeptidyl peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
44. DPF3 ENSGALG00000009352 7 0.951 - - - - - 0.951 - - - - double PHD fingers 3 [Source:NCBI gene;Acc:395351]
45. SLC38A7 ENSGALG00000002313 25 0.951 - - - - - 0.951 - - - - solute carrier family 38 member 7, transcript variant X5
46. BAP1 ENSGALG00000004366 12 0.951 - - - - - 0.951 - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
47. VTG1 ENSGALG00000039354 17 0.951 - - - - - 0.951 - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
48. CREB3 ENSGALG00000002523 23 0.951 - - - - - 0.951 - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
49. CADM3 ENSGALG00000036925 1753 0.951 - - - - 0.951 - - - - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
50. SRPX2 ENSGALG00000006796 32 0.951 - - - - - 0.951 - - - - sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
51. SHANK2 ENSGALG00000035916 9 0.951 - - - - - 0.951 - - - - SH3 and multiple ankyrin repeat domains 2, transcript variant X10
52. TRAF1 ENSGALG00000001583 3 0.951 - - - - - 0.951 - - - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
53. VWA3B ENSGALG00000040709 5 0.951 - - - - - 0.951 - - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
54. WNT3 ENSGALG00000001079 8 0.951 - - - - - 0.951 - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
55. CLDN19 ENSGALG00000023580 1 0.951 - - - - - 0.951 - - - - claudin 19 [Source:HGNC Symbol;Acc:HGNC:2040]
56. INHBB ENSGALG00000028770 2 0.951 - - - - - 0.951 - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
57. TMEM181 ENSGALG00000013737 19 0.951 - - - - - 0.951 - - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
58. ACPP ENSGALG00000043415 4 0.951 - - - - - 0.951 - - - - acid phosphatase, prostate, transcript variant X2
59. ENSGALG00000024369 ENSGALG00000024369 4 0.951 - - - - - 0.951 - - - -
60. SMIM10 SMIM10 2 0.951 - - - - - 0.951 - - - -
61. ENSGALG00000006865 ENSGALG00000006865 307 0.949 - - - - 0.949 - - - - -
62. MAPK10 ENSGALG00000011109 16 0.949 - - - - - 0.949 - - - - Gallus gallus mitogen-activated protein kinase 10 (MAPK10), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318224]
63. GLT8D1 ENSGALG00000001642 4232 0.948 - - - - 0.948 - - - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
64. ABCD2 ENSGALG00000042554 1607 0.948 - - - - 0.948 - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
65. CAMLG ENSGALG00000006411 662 0.944 - - - - 0.944 - - - - - calcium modulating ligand [Source:NCBI gene;Acc:395808]
66. GKAP1 ENSGALG00000012586 2908 0.94 - - - - 0.940 - - - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
67. CCDC102A ENSGALG00000029999 324 0.939 - - - - 0.939 - - - - - coiled-coil domain containing 102A [Source:HGNC Symbol;Acc:HGNC:28097]
68. NAT9 ENSGALG00000007723 2098 0.939 - - - - 0.939 - - - - - N-acetyltransferase 9 (putative), transcript variant X7
69. CNN2 ENSGALG00000027777 512 0.939 - - - - 0.939 - - - - - calponin 2 [Source:NCBI gene;Acc:100216000]
70. FAM183A 242 0.937 - - - - 0.937 - - - - - family with sequence similarity 183 member A, transcript variant 2
71. SCAF4 ENSGALG00000033965 2027 0.937 - - - - 0.937 - - - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
72. KIAA1407 KIAA1407 252 0.936 - - - - 0.936 - - - - -
73. OFD1 ENSGALG00000016576 1916 0.936 - - - - 0.936 - - - - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
74. ENSGALG00000020497 ENSGALG00000020497 446 0.936 - - - - 0.936 - - - - -
75. UNCX ENSGALG00000039292 165 0.936 - - - - - 0.936 - - - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
76. ENSGALG00000001346 ENSGALG00000001346 233 0.934 - - - - 0.934 - - - - -
77. PPM1M ENSGALG00000033277 556 0.93 - - - - 0.930 - - - - - protein phosphatase, Mg2+/Mn2+ dependent 1M [Source:NCBI gene;Acc:415941]
78. SCG5 ENSGALG00000009725 10 0.929 - - - - - 0.929 - - - - secretogranin V [Source:NCBI gene;Acc:769742]
79. LRRC6 ENSGALG00000042548 227 0.928 - - - - 0.928 - - - - - leucine rich repeat containing 6 [Source:NCBI gene;Acc:420324]
80. SCARB2 ENSGALG00000011499 2763 0.928 - - - - 0.928 - - - - - scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]
81. APTX ENSGALG00000001954 692 0.927 - - - - 0.927 - - - - - aprataxin [Source:NCBI gene;Acc:395173]
82. NKX2-1 ENSGALG00000037632 7 0.922 - - - - - 0.922 - - - - NK2 homeobox 1 [Source:NCBI gene;Acc:395322]
83. PCDH8 ENSGALG00000036258 1945 0.921 - - - - - 0.921 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
84. SNORA74 SNORA74 8 0.92 - - - - - 0.920 - - - -
85. STYK1 ENSGALG00000014759 3 0.92 - - - - - 0.920 - - - - serine/threonine/tyrosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:18889]
86. ENSGALG00000001591 ENSGALG00000001591 784 0.92 - - - - 0.920 - - - - -
87. FHAD1 ENSGALG00000034761 3 0.918 - - - - - 0.918 - - - - forkhead associated phosphopeptide binding domain 1 [Source:HGNC Symbol;Acc:HGNC:29408]
88. CCDC88A ENSGALG00000043587 2208 0.917 - - - - 0.917 - - - - - coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
89. NEK3 ENSGALG00000017024 696 0.916 - - - - 0.916 - - - - - NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
90. ENSGALG00000028772 ENSGALG00000028772 1636 0.916 - - - - 0.916 - - - - -
91. NMB ENSGALG00000043506 1387 0.915 - - - - 0.915 - - - - - neuromedin B [Source:NCBI gene;Acc:415333]
92. TCTE1 ENSGALG00000010165 65 0.915 - - - - - 0.915 - - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
93. PRMT10 PRMT10 1169 0.915 - - - - 0.915 - - - - -
94. RIOK3 ENSGALG00000015004 4249 0.915 - - - - 0.915 - - - - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
95. SNRNP35 ENSGALG00000003318 1253 0.915 - - - - 0.915 - - - - - small nuclear ribonucleoprotein U11/U12 subunit 35 [Source:NCBI gene;Acc:416823]
96. KIFC3 ENSGALG00000043034 802 0.915 - - - - 0.915 - - - - - kinesin family member C3 [Source:HGNC Symbol;Acc:HGNC:6326]
97. PPWD1 ENSGALG00000014756 1118 0.914 - - - - 0.914 - - - - - peptidylprolyl isomerase domain and WD repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:28954]
98. MED7 ENSGALG00000003870 4244 0.914 - - - - 0.914 - - - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
99. ACP6 ENSGALG00000015485 3147 0.911 - - - - 0.911 - - - - - acid phosphatase 6, lysophosphatidic [Source:NCBI gene;Acc:418458]
100. C1orf50 ENSGALG00000004800 4894 0.911 - - - - 0.911 - - - - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]

There are 325 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA