Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CCDC53

Gene Name Gene ID Reads Annotation
CCDC53 CCDC53 3732











Genes with expression patterns similar to CCDC53

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCDC53 CCDC53 3732 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. C1GALT1 ENSGALG00000009752 7148 1.603 - - - - - - 0.875 - 0.728 - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
3. MYEF2 ENSGALG00000032546 7436 1.592 - - - - - - 0.785 0.807 - - myelin expression factor 2 [Source:NCBI gene;Acc:415432]
4. TERF1 ENSGALG00000037453 4497 1.587 - - - - - - 0.811 0.776 - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
5. ITFG1 ENSGALG00000004049 2934 1.586 - - - - - - 0.871 0.715 - - integrin alpha FG-GAP repeat containing 1 [Source:NCBI gene;Acc:415742]
6. CREPT CREPT 17142 1.577 - - - - - - - 0.869 - 0.708
7. REXO4 ENSGALG00000030609 2926 1.577 - - - - - - 0.822 - 0.755 - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
8. EML1 1941 1.571 - - - - - - 0.837 0.734 - - echinoderm microtubule associated protein like 1, transcript variant X11
9. DECR1 ENSGALG00000036990 6360 1.566 - - - - - - 0.835 0.731 - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
10. TAF5 ENSGALG00000008241 5227 1.565 - - - - - - 0.800 0.765 - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
11. BUD13_1 ENSGALG00000025882 1118 1.555 - - - - - - 0.812 0.743 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
12. ABHD13 ENSGALG00000016853 4975 1.549 - - - - - - 0.822 - 0.727 - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
13. BSDC1 ENSGALG00000003405 3701 1.548 - - - - - - 0.790 - 0.758 - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
14. RER1 ENSGALG00000021683 9074 1.53 - - - - - - 0.779 0.751 - - retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
15. ZNF384 ENSGALG00000032599 2369 1.529 - - - - - - - 0.794 0.735 - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
16. PPID ENSGALG00000009451 7529 1.524 - - - - - - 0.737 0.787 - - peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:HGNC:9257]
17. SPATA2 ENSGALG00000008026 2040 1.497 - - - - - - 0.769 0.728 - - spermatogenesis associated 2 [Source:NCBI gene;Acc:419355]
18. PLEKHH2 ENSGALG00000009947 6384 1.495 - - - - - - - 0.755 0.740 - pleckstrin homology, MyTH4 and FERM domain containing H2 [Source:HGNC Symbol;Acc:HGNC:30506]
19. ADARB1 ENSGALG00000007527 2480 1.478 - - - - - - - - 0.755 0.723 adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
20. HYAL1 ENSGALG00000000785 1778 1.477 - - - - - - 0.743 0.734 - - hyaluronoglucosaminidase 1, transcript variant X3
21. NUDT6 ENSGALG00000011834 1309 1.446 - - - - - - - 0.702 0.744 - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
22. USP5 ENSGALG00000014525 21883 0.917 - - - - - - 0.917 - - - ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
23. LOC112529965 ENSGALG00000010758 5395 0.91 - - - - - - - 0.910 - - NADH-cytochrome b5 reductase-like
24. TMEM14A ENSGALG00000019894 5279 0.893 - - - - - - 0.893 - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
25. COX20 ENSGALG00000027440 5881 0.889 - - - - - - 0.889 - - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
26. PITPNB ENSGALG00000005654 21578 0.887 - - - - - - 0.887 - - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
27. PWP1 ENSGALG00000012631 10536 0.887 - - - - - - 0.887 - - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
28. ENSGALG00000000514 ENSGALG00000000514 9906 0.885 - - - - - - 0.885 - - -
29. GTPBP4 ENSGALG00000006703 16183 0.884 - - - - - - - 0.884 - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
30. WWC3 ENSGALG00000034834 9392 0.882 - - - - - - 0.882 - - - WWC family member 3 [Source:HGNC Symbol;Acc:HGNC:29237]
31. PLEKHA5 ENSGALG00000013134 3656 0.882 - - - - - - 0.882 - - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
32. ENSGALG00000007035 ENSGALG00000007035 8473 0.881 - - - - - - 0.881 - - -
33. CAMSAP1 ENSGALG00000001692 2617 0.878 - - - - - - - 0.878 - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
34. MLLT10 ENSGALG00000007928 4022 0.876 - - - - - - 0.876 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]
35. INTS6L ENSGALG00000006157 2303 0.876 - - - - - - 0.876 - - - integrator complex subunit 6 like, transcript variant X6
36. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.873 - - - - - - 0.873 - - -
37. COMMD5 ENSGALG00000008867 12173 0.872 - - - - - - 0.872 - - - COMM domain containing 5 [Source:NCBI gene;Acc:422376]
38. GHITM ENSGALG00000021262 7159 0.871 - - - - - - 0.871 - - - growth hormone inducible transmembrane protein [Source:NCBI gene;Acc:423621]
39. FOXK2 ENSGALG00000001577 6346 0.871 - - - - - - 0.871 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
40. RNH1 ENSGALG00000006904 14542 0.869 - - - - - - - 0.869 - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
41. PDP1 ENSGALG00000034876 2965 0.869 - - - - - - 0.869 - - - pyruvate dehyrogenase phosphatase catalytic subunit 1 [Source:NCBI gene;Acc:428372]
42. ZCCHC8 ENSGALG00000004486 3201 0.867 - - - - - - 0.867 - - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
43. MRPS35 ENSGALG00000036730 6327 0.867 - - - - - - 0.867 - - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
44. DLAT ENSGALG00000007904 3297 0.865 - - - - - - 0.865 - - - dihydrolipoamide S-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2896]
45. PGRMC1 ENSGALG00000020260 19059 0.865 - - - - - - 0.865 - - - progesterone receptor membrane component 1 [Source:NCBI gene;Acc:772196]
46. XRN1 ENSGALG00000002706 4014 0.865 - - - - - - - 0.865 - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
47. DDX42 ENSGALG00000000581 8780 0.865 - - - - - - 0.865 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
48. ATXN7 ENSGALG00000007302 2596 0.864 - - - - - - 0.864 - - - ataxin 7, transcript variant X3
49. TRNT1 ENSGALG00000017368 11932 0.863 - - - - - - 0.863 - - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
50. WRB ENSGALG00000016070 5199 0.862 - - - - - - - 0.862 - - tryptophan rich basic protein [Source:NCBI gene;Acc:770415]
51. IFT52 ENSGALG00000003523 1858 0.862 - - - - - - 0.862 - - - intraflagellar transport 52 [Source:NCBI gene;Acc:419165]
52. NNT ENSGALG00000014869 8496 0.862 - - - - - - 0.862 - - - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
53. RPL22 ENSGALG00000000719 74238 0.861 - - - - - - 0.861 - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
54. ZC3H7A ENSGALG00000003143 7114 0.861 - - - - - - 0.861 - - - zinc finger CCCH-type containing 7A [Source:HGNC Symbol;Acc:HGNC:30959]
55. B4GALNT4 ENSGALG00000004250 2150 0.861 - - - - - - 0.861 - - - beta-1,4-N-acetyl-galactosaminyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:26315]
56. PANK1 ENSGALG00000006431 2910 0.861 - - - - - - 0.861 - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
57. ZNHIT6 ENSGALG00000008658 4383 0.86 - - - - - - 0.860 - - - zinc finger HIT-type containing 6 [Source:HGNC Symbol;Acc:HGNC:26089]
58. ASAP2 ENSGALG00000016419 1393 0.858 - - - - - - 0.858 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
59. TBC1D12 ENSGALG00000034044 5588 0.858 - - - - - - 0.858 - - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
60. PDDC1 5179 0.857 - - - - - - - 0.857 - - Parkinson disease 7 domain containing 1, transcript variant X6
61. BAG4 ENSGALG00000003254 5751 0.857 - - - - - - 0.857 - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
62. MRPL23 ENSGALG00000006561 13737 0.856 - - - - - - 0.856 - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
63. DNTTIP2 4528 0.855 - - - - - - 0.855 - - - deoxynucleotidyltransferase, terminal, interacting protein 2, transcript variant X3
64. SALL1 ENSGALG00000039238 3740 0.854 - - - - - - 0.854 - - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
65. VAPB ENSGALG00000007549 15511 0.854 - - - - - - 0.854 - - - VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
66. USP47 ENSGALG00000005569 4813 0.853 - - - - - - 0.853 - - - ubiquitin specific peptidase 47 [Source:NCBI gene;Acc:423032]
67. UXS1 ENSGALG00000016801 3724 0.853 - - - - - - 0.853 - - - UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
68. GTF3C4 ENSGALG00000031016 1221 0.853 - - - - - - - - 0.853 - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
69. C9orf64 ENSGALG00000012589 6097 0.853 - - - - - - - 0.853 - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
70. TSPAN13 ENSGALG00000027240 8999 0.852 - - - - - - 0.852 - - - tetraspanin 13 [Source:NCBI gene;Acc:420595]
71. C9orf85 ENSGALG00000026001 4110 0.852 - - - - - - 0.852 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
72. YIPF1 5945 0.85 - - - - - - 0.850 - - - Yip1 domain family member 1, transcript variant 4
73. EP3 EP3 741 0.85 - - - - - - - - 0.850 -
74. AP1AR ENSGALG00000028807 2398 0.849 - - - - - - 0.849 - - - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
75. NEK7 ENSGALG00000002216 4532 0.849 - - - - - - 0.849 - - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
76. AARS2 ENSGALG00000035337 1761 0.848 - - - - - - - - 0.848 - alanyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421436]
77. CYB5R2 ENSGALG00000032372 7967 0.848 - - - - - - - 0.848 - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
78. NDUFS8 ENSGALG00000040173 24745 0.848 - - - - - - 0.848 - - - NADH:ubiquinone oxidoreductase core subunit S8 [Source:HGNC Symbol;Acc:HGNC:7715]
79. SLC33A1 ENSGALG00000010302 4735 0.848 - - - - - - 0.848 - - - solute carrier family 33 member 1, transcript variant X1
80. TBC1D7 ENSGALG00000012731 4891 0.847 - - - - - - - 0.847 - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
81. PDLIM5 ENSGALG00000012211 3064 0.847 - - - - - - - 0.847 - - PDZ and LIM domain 5 [Source:NCBI gene;Acc:422699]
82. NSMCE2 ENSGALG00000043439 5658 0.846 - - - - - - - 0.846 - - NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase [Source:NCBI gene;Acc:420333]
83. ENSGALG00000001483 ENSGALG00000001483 215 0.846 - - - - - - - - 0.846 -
84. TJP1 ENSGALG00000042552 3081 0.845 - - - - - - 0.845 - - - tight junction protein 1 [Source:HGNC Symbol;Acc:HGNC:11827]
85. MCM4 ENSGALG00000012915 13151 0.845 - - - - - - - 0.845 - - minichromosome maintenance complex component 4
86. CALCOCO2 ENSGALG00000001525 3121 0.845 - - - - - - 0.845 - - - calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
87. GSKIP ENSGALG00000011088 3421 0.844 - - - - - - 0.844 - - - GSK3B interacting protein [Source:NCBI gene;Acc:423442]
88. ARL5A ENSGALG00000041099 4592 0.843 - - - - - - 0.843 - - - ADP ribosylation factor like GTPase 5A [Source:HGNC Symbol;Acc:HGNC:696]
89. WDR12 ENSGALG00000008470 7654 0.843 - - - - - - 0.843 - - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
90. MTMR8 ENSGALG00000007590 6022 0.842 - - - - - - - 0.842 - - myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
91. BIVM ENSGALG00000016861 3987 0.842 - - - - - - - 0.842 - - basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]
92. WWC1 ENSGALG00000001826 4666 0.841 - - - - - - 0.841 - - - WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
93. FREM3 ENSGALG00000020561 1824 0.841 - - - - - - 0.841 - - - FRAS1 related extracellular matrix 3
94. BEND5 ENSGALG00000010505 3298 0.841 - - - - - - 0.841 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
95. LIG3 ENSGALG00000002288 7198 0.84 - - - - - - 0.840 - - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
96. ARID2 ENSGALG00000033074 3461 0.84 - - - - - - - 0.840 - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
97. PYCR1 ENSGALG00000007300 7987 0.84 - - - - - - 0.840 - - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
98. RDM1 ENSGALG00000000243 3388 0.84 - - - - - - 0.840 - - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
99. CAT ENSGALG00000030187 7534 0.839 - - - - - - 0.839 - - - catalase [Source:NCBI gene;Acc:423600]
100. FBXO33 ENSGALG00000010192 2917 0.839 - - - - - - 0.839 - - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]

There are 493 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA