Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC50

Gene Name Gene ID Reads Annotation
CCDC50 ENSGALG00000020813 739 coiled-coil domain containing 50 [Source:NCBI gene;Acc:424906]











Genes with expression patterns similar to CCDC50

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCDC50 ENSGALG00000020813 739 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 50 [Source:NCBI gene;Acc:424906]
2. ZNFX1 ENSGALG00000004859 33 1.517 - - - - 0.758 - - 0.759 - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
3. IL22RA1 ENSGALG00000004221 71 1.498 - - - - 0.755 - - 0.743 - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
4. SLC24A2 ENSGALG00000015080 54 1.455 - - - 0.745 0.710 - - - - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]
5. CYP2H1 CYP2H1 363 1.425 - - - - 0.707 - - 0.718 - -
6. PRSS35 ENSGALG00000015847 52 0.879 - - - - - - - 0.879 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
7. RIPK4 ENSGALG00000040189 102 0.86 - - - - - - - 0.860 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
8. ARRDC1 ENSGALG00000008475 80 0.841 - - - - - - - 0.841 - - arrestin domain containing 1 [Source:NCBI gene;Acc:427772]
9. BMP-10 BMP-10 22 0.838 - - - 0.838 - - - - - -
10. TMCO4 ENSGALG00000004081 31 0.834 - - - - - - - 0.834 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
11. GFAP ENSGALG00000000909 21 0.832 - - - - - - - 0.832 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
12. EPB41L4A ENSGALG00000000234 113 0.831 - - - - - - - 0.831 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
13. SDR42E2 ENSGALG00000006964 57 0.83 - - - - - - - 0.830 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
14. USP53 ENSGALG00000011990 12 0.83 - - - - - - - 0.830 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
15. ENPP3 ENSGALG00000037587 25 0.83 - - - - - - - 0.830 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
16. CCDC96 9 0.829 - - - - - - - 0.829 - - coiled-coil domain containing 96
17. GINS3 ENSGALG00000031209 32 0.829 - - - - - - - 0.829 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
18. APOAIV APOAIV 5 0.829 - - - - - - - 0.829 - -
19. FOXP4 ENSGALG00000033497 13 0.829 - - - - - - - 0.829 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
20. PLB1 PLB1 101 0.829 - - - - - - - 0.829 - -
21. ENSGALG00000019053 ENSGALG00000019053 8 0.829 - - - - - - - 0.829 - -
22. STAB1 21 0.829 - - - - - - - 0.829 - - stabilin 1, transcript variant X2
23. ICOS ENSGALG00000008656 27 0.828 - - - - - - - 0.828 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
24. KRT20 ENSGALG00000019716 11 0.827 - - - - - - - 0.827 - - keratin 20 [Source:NCBI gene;Acc:420045]
25. INA ENSGALG00000028238 208 0.825 - - - - - - - 0.825 - - internexin neuronal intermediate filament protein alpha
26. CCDC86 ENSGALG00000036935 5280 0.824 - - - - - - - 0.824 - - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
27. ENSGALG00000019522 ENSGALG00000019522 122 0.824 - - - - - - - 0.824 - -
28. CD4 ENSGALG00000014477 19 0.823 - - - - - - - 0.823 - - CD4 molecule [Source:NCBI gene;Acc:395362]
29. PAK2 ENSGALG00000006426 283 0.823 - - - - - - - 0.823 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
30. ENSGALG00000019430 ENSGALG00000019430 32 0.823 - - - - - - - 0.823 - -
31. PEX12 ENSGALG00000002151 953 0.822 - - - - - - - 0.822 - - peroxisomal biogenesis factor 12 [Source:HGNC Symbol;Acc:HGNC:8854]
32. ABCA8 ENSGALG00000021399 11 0.82 - - - - - - - 0.820 - - ATP binding cassette subfamily A member 8
33. MAPT ENSGALG00000000625 659 0.82 - - - - - - - 0.820 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
34. ENSGALG00000028778 ENSGALG00000028778 47 0.82 - - - 0.820 - - - - - -
35. ANKRD44 ENSGALG00000007996 17 0.817 - - - - - - - 0.817 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
36. HM13 ENSGALG00000006207 8354 0.817 - - - 0.817 - - - - - - histocompatibility minor 13 [Source:HGNC Symbol;Acc:HGNC:16435]
37. DNAI2 ENSGALG00000004495 45 0.817 - - - - - - - 0.817 - - dynein axonemal intermediate chain 2
38. DCAF10 ENSGALG00000005390 214 0.816 - - - - - - - 0.816 - - DDB1 and CUL4 associated factor 10 [Source:HGNC Symbol;Acc:HGNC:23686]
39. FAM219A ENSGALG00000005821 52 0.815 - - - - - - - 0.815 - - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
40. KIAA0513 ENSGALG00000025938 46 0.814 - - - - - - - 0.814 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
41. KLRD1 ENSGALG00000014722 27 0.814 - - - - - - - 0.814 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
42. AQP12 AQP12 11 0.813 - - - - - - - 0.813 - -
43. GNPTAB ENSGALG00000012763 435 0.813 - - - - - - - - 0.813 - N-acetylglucosamine-1-phosphate transferase subunits alpha and beta [Source:HGNC Symbol;Acc:HGNC:29670]
44. ZIC3 ENSGALG00000031144 863 0.812 - - - - - - - 0.812 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
45. LRRK1 LRRK1 35 0.807 - - - 0.807 - - - - - -
46. LOC417973 ENSGALG00000019325 9 0.807 - - - - - - - 0.807 - - uncharacterized LOC417973, transcript variant X1
47. ENSGALG00000021882 ENSGALG00000021882 63 0.807 - - - - - - - 0.807 - -
48. DZANK1 ENSGALG00000008731 120 0.806 - - - - - - - 0.806 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
49. SCD ENSGALG00000005739 161 0.806 - - - - - - - 0.806 - - stearoyl-CoA desaturase [Source:NCBI gene;Acc:395706]
50. ENSGALG00000023485 ENSGALG00000023485 46 0.805 - - - 0.805 - - - - - -
51. MGAT4D ENSGALG00000009830 23 0.805 - - - 0.805 - - - - - - MGAT4 family member D [Source:HGNC Symbol;Acc:HGNC:43619]
52. HAVCR1 ENSGALG00000017362 25 0.804 - - - - - - - 0.804 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
53. CX3CR1 ENSGALG00000038000 48 0.803 - - - - - - - 0.803 - - C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]
54. ENSGALG00000023731 ENSGALG00000023731 149 0.801 - - - - - - - 0.801 - -
55. ENSGALG00000004050 ENSGALG00000004050 9 0.801 - - - 0.801 - - - - - -
56. MTHFD2L ENSGALG00000010855 14 0.799 - - - 0.799 - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:HGNC Symbol;Acc:HGNC:31865]
57. IRG1 IRG1 21 0.798 - - - - - - - 0.798 - -
58. TP53I3 ENSGALG00000016502 178 0.796 - - - - - - - 0.796 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
59. DDAH1 ENSGALG00000008663 8 0.795 - - - 0.795 - - - - - - dimethylarginine dimethylaminohydrolase 1 [Source:NCBI gene;Acc:378898]
60. SLC18A2 ENSGALG00000009289 11 0.795 - - - 0.795 - - - - - - solute carrier family 18 member A2 [Source:HGNC Symbol;Acc:HGNC:10935]
61. PNMT ENSGALG00000027281 14 0.795 - - - 0.795 - - - - - - phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
62. CRLF2 ENSGALG00000045814 7 0.795 - - - 0.795 - - - - - - cytokine receptor-like factor 2
63. NXPH2 ENSGALG00000029083 353 0.795 - - - - - - - 0.795 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
64. RNASET2 ENSGALG00000011426 40 0.795 - - - - - - - 0.795 - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
65. ACAP3 ENSGALG00000033293 605 0.792 - - - - - - - 0.792 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, transcript variant X6
66. SNORA19 SNORA19 70 0.791 - - - 0.791 - - - - - -
67. CL2 ENSGALG00000011455 87 0.79 - - - 0.790 - - - - - - liver ribonuclease A [Source:NCBI gene;Acc:422633]
68. PTPRD ENSGALG00000015058 37 0.788 - - - - - - - 0.788 - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
69. TJP3 ENSGALG00000000748 45 0.788 - - - 0.788 - - - - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
70. SMO ENSGALG00000036114 6559 0.788 - - - - - - - 0.788 - - smoothened, frizzled class receptor [Source:HGNC Symbol;Acc:HGNC:11119]
71. SMYD1 ENSGALG00000015935 75 0.787 - - - - - - - 0.787 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
72. ENSGALG00000018733 ENSGALG00000018733 175 0.787 - - - 0.787 - - - - - -
73. TMEFF2 ENSGALG00000007759 93 0.787 - - - 0.787 - - - - - - transmembrane protein with EGF like and two follistatin like domains 2 [Source:HGNC Symbol;Acc:HGNC:11867]
74. C22H2ORF42 ENSGALG00000013881 259 0.786 - - - 0.786 - - - - - - chromosome 22 open reading frame, human C2orf42 [Source:NCBI gene;Acc:426298]
75. CLDN12 ENSGALG00000009038 16 0.785 - - - 0.785 - - - - - - claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
76. XYLB ENSGALG00000006173 23 0.784 - - - 0.784 - - - - - - xylulokinase [Source:HGNC Symbol;Acc:HGNC:12839]
77. NTF3 ENSGALG00000027299 72 0.783 - - - - - - - 0.783 - - neurotrophin 3 [Source:NCBI gene;Acc:428099]
78. CNTN1 ENSGALG00000009523 158 0.782 - - - - - - - 0.782 - - contactin 1 [Source:NCBI gene;Acc:417786]
79. SPINK4 ENSGALG00000043964 50 0.779 - - - - - - - 0.779 - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
80. SLC7A2 ENSGALG00000013627 58 0.777 - - - - - - - 0.777 - - solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
81. DOCK5 ENSGALG00000000311 51 0.776 - - - - - - - 0.776 - - dedicator of cytokinesis 5, transcript variant X2
82. ABCC4 ENSGALG00000016896 154 0.775 - - - - - - - 0.775 - - ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
83. CD200R1A CD200R1A 105 0.774 - - - - - - - 0.774 - -
84. NTS ENSGALG00000027192 669 0.774 - - - 0.774 - - - - - - neurotensin [Source:NCBI gene;Acc:417883]
85. HOOK3 ENSGALG00000015390 992 0.774 - - - - - - - 0.774 - - hook microtubule tethering protein 3 [Source:HGNC Symbol;Acc:HGNC:23576]
86. ENSGALG00000008755 ENSGALG00000008755 3523 0.773 - - - - - - - 0.773 - -
87. TRAF-5 TRAF-5 102 0.773 - - - - - - - 0.773 - -
88. RRAD ENSGALG00000005140 183 0.772 - - - 0.772 - - - - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
89. TMEM231 ENSGALG00000003219 53 0.772 - - - 0.772 - - - - - - transmembrane protein 231 [Source:NCBI gene;Acc:425108]
90. TMEM196 ENSGALG00000010865 239 0.772 - - - 0.772 - - - - - - transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]
91. PRNP ENSGALG00000000209 2159 0.771 - - - - - - - 0.771 - - prion protein [Source:NCBI gene;Acc:396452]
92. NPTN ENSGALG00000001741 481 0.771 - - - - - - - 0.771 - - neuroplastin [Source:NCBI gene;Acc:415316]
93. PRCP ENSGALG00000037521 4012 0.769 - - - - - - - 0.769 - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
94. TMEM82 16 0.768 - - - 0.768 - - - - - - transmembrane protein 82, transcript variant X2
95. STXBP1 ENSGALG00000040003 157 0.767 - - - - - - - 0.767 - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
96. SNAP23 ENSGALG00000009097 36 0.767 - - - - - - - 0.767 - - synaptosome associated protein 23 [Source:NCBI gene;Acc:423235]
97. LOC419074 ENSGALG00000017336 1885 0.767 - - - - - - - 0.767 - - F-box/WD repeat-containing protein 7-like, transcript variant X3
98. CPM ENSGALG00000009945 140 0.766 - - - 0.766 - - - - - - carboxypeptidase M [Source:NCBI gene;Acc:417843]
99. KIF16B 4311 0.766 - - - - - - - 0.766 - - kinesin family member 16B, transcript variant X2
100. TMEM161B ENSGALG00000010896 36 0.766 - - - 0.766 - - - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]

There are 116 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA