Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC47

Gene Name Gene ID Reads Annotation
CCDC47 ENSGALG00000000564 6584 coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]











Genes with expression patterns similar to CCDC47

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCDC47 ENSGALG00000000564 6584 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
2. LARS ENSGALG00000007494 13966 1.723 - - - 0.745 - - 0.978 - - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
3. GFPT1 ENSGALG00000036391 14025 1.712 - - - 0.724 - - 0.988 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
4. VPS13B 2293 1.534 - - - 0.768 - - - - - 0.766 vacuolar protein sorting 13 homolog B
5. ENSGALG00000007514 ENSGALG00000007514 4866 1.52 - - - 0.731 - - - 0.789 - -
6. PFKL ENSGALG00000006543 4361 1.504 - - - 0.730 - - - 0.774 - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
7. NUDT4 ENSGALG00000011285 2998 1.481 - - - 0.721 - - - - - 0.760 nudix hydrolase 4, transcript variant X5
8. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 1.471 - - - 0.749 - - - - - 0.722
9. KIAA1143 ENSGALG00000035952 6735 1.46 - - - 0.748 - - - 0.712 - - KIAA1143 [Source:NCBI gene;Acc:420709]
10. DPY30 ENSGALG00000010621 6818 1.458 - - - 0.740 - - - 0.718 - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
11. EIF2AK4 ENSGALG00000009611 2164 1.456 - - - 0.706 - 0.750 - - - - eukaryotic translation initiation factor 2 alpha kinase 4 [Source:HGNC Symbol;Acc:HGNC:19687]
12. CARKD CARKD 2914 1.449 - - - - - 0.711 - - - 0.738
13. WARS ENSGALG00000011228 193 1.448 - - - - - 0.711 - - - 0.737 tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
14. GTF3C4 ENSGALG00000031016 1221 1.442 - - - 0.714 - 0.728 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
15. IRF6 ENSGALG00000001405 3144 1.422 - - - 0.716 - - - 0.706 - - interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
16. ATR ENSGALG00000002663 4626 1.418 - - - 0.700 - - - 0.718 - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
17. ECHDC1 ENSGALG00000014828 958 1.417 - - - - - 0.711 - - - 0.706 ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
18. PRKD1 ENSGALG00000009900 2094 1.406 - - - 0.700 - - - 0.706 - - protein kinase D1 [Source:NCBI gene;Acc:423302]
19. HOXB3 ENSGALG00000043219 5198 0.999 - - - - - - 0.999 - - - homeobox B3 [Source:NCBI gene;Acc:395502]
20. POGZ ENSGALG00000036365 4056 0.999 - - - - - - 0.999 - - - pogo transposable element with ZNF domain, transcript variant X2
21. WDR33 ENSGALG00000002043 6340 0.999 - - - - - - 0.999 - - - WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
22. RARRES2 ENSGALG00000042642 3043 0.999 - - - - - - 0.999 - - - retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
23. USP34 ENSGALG00000004455 6667 0.999 - - - - - - 0.999 - - - ubiquitin specific peptidase 34 [Source:NCBI gene;Acc:421193]
24. TRIM37 ENSGALG00000005084 4036 0.999 - - - - - - 0.999 - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
25. VPS41 ENSGALG00000031635 4391 0.999 - - - - - - 0.999 - - - VPS41, HOPS complex subunit [Source:NCBI gene;Acc:420762]
26. FAM206A ENSGALG00000019524 7170 0.999 - - - - - - 0.999 - - - family with sequence similarity 206 member A [Source:NCBI gene;Acc:420983]
27. ZCCHC17 ENSGALG00000000618 5163 0.999 - - - - - - 0.999 - - - zinc finger CCHC-type containing 17 [Source:NCBI gene;Acc:404295]
28. CASC4 ENSGALG00000008208 8338 0.998 - - - - - - 0.998 - - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
29. SLC9A3R2 ENSGALG00000005608 4220 0.998 - - - - - - 0.998 - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
30. SF3A1 ENSGALG00000007937 11716 0.998 - - - - - - 0.998 - - - splicing factor 3a subunit 1 [Source:NCBI gene;Acc:427717]
31. GTF2I ENSGALG00000021665 6812 0.998 - - - - - - 0.998 - - - general transcription factor IIi [Source:HGNC Symbol;Acc:HGNC:4659]
32. EIF5B ENSGALG00000016764 30681 0.998 - - - - - - 0.998 - - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
33. FAAH ENSGALG00000010433 3309 0.998 - - - - - - 0.998 - - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
34. SH2D3C ENSGALG00000005036 5101 0.998 - - - - - - 0.998 - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
35. SAMM50 ENSGALG00000014194 20437 0.998 - - - - - - 0.998 - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
36. C-MET C-MET 1650 0.998 - - - - - - 0.998 - - -
37. TLE4 TLE4 7278 0.997 - - - - - - 0.997 - - -
38. PPP1CB ENSGALG00000010026 6909 0.997 - - - - - - 0.997 - - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
39. STT3B ENSGALG00000011465 11939 0.997 - - - - - - 0.997 - - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
40. PCNA ENSGALG00000029292 19163 0.997 - - - - - - 0.997 - - - proliferating cell nuclear antigen [Source:NCBI gene;Acc:373984]
41. GAS41 GAS41 9941 0.996 - - - - - - 0.996 - - -
42. SSR1 ENSGALG00000012798 62626 0.996 - - - - - - 0.996 - - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
43. TMEM9B ENSGALG00000005908 14074 0.996 - - - - - - 0.996 - - - TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
44. FKBP9 ENSGALG00000037669 12079 0.994 - - - - - - 0.994 - - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
45. BTG1 ENSGALG00000011276 17496 0.993 - - - - - - 0.993 - - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
46. NSF ENSGALG00000001055 7399 0.993 - - - - - - 0.993 - - - N-ethylmaleimide sensitive factor, vesicle fusing ATPase [Source:NCBI gene;Acc:419972]
47. BID ENSGALG00000013039 12427 0.993 - - - - - - 0.993 - - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
48. MTF2 ENSGALG00000043087 15225 0.991 - - - - - - 0.991 - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
49. PPP1R8 ENSGALG00000000729 11797 0.99 - - - - - - 0.990 - - - protein phosphatase 1 regulatory subunit 8 [Source:NCBI gene;Acc:419564]
50. NAA15 ENSGALG00000009782 18563 0.99 - - - - - - 0.990 - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
51. OLFML3 ENSGALG00000001956 28633 0.985 - - - - - - 0.985 - - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
52. FANCC ENSGALG00000012618 7002 0.984 - - - - - - 0.984 - - - FA complementation group C [Source:NCBI gene;Acc:427468]
53. STK3 ENSGALG00000032850 6339 0.983 - - - - - - 0.983 - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
54. LPHN2 LPHN2 16507 0.977 - - - - - - 0.977 - - -
55. NOL9 ENSGALG00000028958 23978 0.97 - - - - - - 0.970 - - - nucleolar protein 9 [Source:HGNC Symbol;Acc:HGNC:26265]
56. SRSF7 ENSGALG00000033120 43444 0.96 - - - - - - 0.960 - - - serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]
57. PKM ENSGALG00000001992 93960 0.931 - - - - - - 0.931 - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
58. SYNCRIP ENSGALG00000015830 30555 0.921 - - - - - - 0.921 - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
59. ACTG1 ENSGALG00000001381 63905 0.918 - - - - - - 0.918 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
60. GNB2L1 ENSGALG00000000122 194871 0.889 - - - - - - 0.889 - - - receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
61. SNF8 ENSGALG00000001309 7398 0.881 - - - - - - - - - 0.881 SNF8, ESCRT-II complex subunit [Source:HGNC Symbol;Acc:HGNC:17028]
62. BNIP3L ENSGALG00000043405 10316 0.88 - - - - - - - 0.880 - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
63. SFSWAP ENSGALG00000002487 9977 0.88 - - - - - - 0.880 - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
64. NDUFS4 ENSGALG00000028026 25876 0.87 - - - - - - 0.870 - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
65. AGPS ENSGALG00000009236 2250 0.87 - - - - - - - 0.870 - - alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
66. SH3BGRL ENSGALG00000007128 18708 0.854 - - - - - - - 0.854 - - SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
67. EEF1D 153795 0.852 - - - - - - 0.852 - - - eukaryotic translation elongation factor 1 delta, transcript variant X13
68. MPI ENSGALG00000029296 11781 0.849 - - - - - - - 0.849 - - mannose phosphate isomerase [Source:HGNC Symbol;Acc:HGNC:7216]
69. APP ENSGALG00000015770 9438 0.847 - - - - - - - 0.847 - - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
70. ERLIN2 ENSGALG00000003092 18251 0.845 - - - - - - - 0.845 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
71. ARFIP1 ENSGALG00000041361 7351 0.831 - - - - - - - 0.831 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
72. TSEN15 ENSGALG00000004782 2520 0.829 - - - - - - - 0.829 - - tRNA splicing endonuclease subunit 15 [Source:HGNC Symbol;Acc:HGNC:16791]
73. B4GALNT4 ENSGALG00000004250 2150 0.828 - - - - - - - 0.828 - - beta-1,4-N-acetyl-galactosaminyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:26315]
74. PLAA ENSGALG00000001782 5459 0.827 - - - - - - - 0.827 - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
75. FIG4 ENSGALG00000015070 3018 0.82 - - - - - - - - - 0.820 FIG4 phosphoinositide 5-phosphatase [Source:NCBI gene;Acc:421762]
76. PWP1 ENSGALG00000012631 10536 0.818 - - - - - - - 0.818 - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
77. DCUN1D2 ENSGALG00000029145 2414 0.816 - - - - - - - - - 0.816 defective in cullin neddylation 1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20328]
78. RPS8 ENSGALG00000010124 363516 0.813 - - - - - - 0.813 - - - ribosomal protein S8 [Source:NCBI gene;Acc:424584]
79. RCN2 ENSGALG00000039284 17848 0.812 - - - - - - - 0.812 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
80. GNAI2 ENSGALG00000035645 9535 0.812 - - - - - - - 0.812 - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
81. SLC30A6 ENSGALG00000010618 3197 0.81 - - - - - - - 0.810 - - solute carrier family 30 member 6 [Source:NCBI gene;Acc:421480]
82. ETFA ENSGALG00000002925 24053 0.809 - - - - - - - 0.809 - - electron-transfer-flavoprotein, alpha polypeptide [Source:NCBI gene;Acc:415353]
83. GGNBP2 ENSGALG00000005397 2226 0.808 - - - - - - - - - 0.808 gametogenetin binding protein 2 [Source:NCBI gene;Acc:425053]
84. AZIN1 ENSGALG00000029295 11085 0.807 - - - - - - - 0.807 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
85. NENF ENSGALG00000009821 4826 0.803 - - - - - - - 0.803 - - neudesin neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:30384]
86. HERPUD2 ENSGALG00000040364 6073 0.803 - - - - - - - 0.803 - - HERPUD family member 2 [Source:HGNC Symbol;Acc:HGNC:21915]
87. CHMP4B ENSGALG00000002095 17422 0.803 - - - - - - - 0.803 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
88. FTD FTD 3041 0.802 - - - - - - - 0.802 - -
89. HAUS2 ENSGALG00000009111 5323 0.801 - - - - - - - - - 0.801 HAUS augmin like complex subunit 2 [Source:NCBI gene;Acc:423237]
90. BAG1 ENSGALG00000013157 4014 0.798 - - - - - - - 0.798 - - BCL2 associated athanogene 1 [Source:NCBI gene;Acc:420967]
91. CTDSPL2 ENSGALG00000008199 3534 0.798 - - - - - - - 0.798 - - CTD small phosphatase like 2 [Source:NCBI gene;Acc:415574]
92. PHACTR4 ENSGALG00000042485 3523 0.796 - - - - - - - 0.796 - - phosphatase and actin regulator 4 [Source:HGNC Symbol;Acc:HGNC:25793]
93. PLCG2 ENSGALG00000033507 348 0.795 - - - - - - - - - 0.795 phospholipase C gamma 2 [Source:HGNC Symbol;Acc:HGNC:9066]
94. ENSGALG00000026666 ENSGALG00000026666 78 0.795 - - - - - - - - - 0.795
95. MLEC ENSGALG00000007102 2880 0.795 - - - - - - - 0.795 - - malectin [Source:HGNC Symbol;Acc:HGNC:28973]
96. PQLC3 ENSGALG00000016449 39 0.795 - - - - - - - - - 0.795 PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
97. KTN1 ENSGALG00000012137 4058 0.794 - - - - - - - 0.794 - - kinectin 1 [Source:NCBI gene;Acc:396335]
98. TM2D2 ENSGALG00000003356 7088 0.794 - - - - - - - 0.794 - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
99. CTSL2 CTSL2 7966 0.793 - - - - - - - 0.793 - -
100. YIPF5 ENSGALG00000007404 5598 0.791 - - - - - - - 0.791 - - Yip1 domain family member 5 [Source:NCBI gene;Acc:416344]

There are 428 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA