Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CCDC39

Gene Name Gene ID Reads Annotation
CCDC39 150 coiled-coil domain containing 39










Genes with expression patterns similar to CCDC39

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CCDC39 150 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 39
2. pttg1 ENSDARG00000075421 166 1.682 - 0.846 - - - - 0.836 - - pituitary tumor-transforming 1 [Source:ZFIN;Acc:ZDB-GENE-081104-345]
3. golt1ba ENSDARG00000022795 121 1.68 0.873 - - - - - 0.807 - - golgi transport 1Ba [Source:ZFIN;Acc:ZDB-GENE-041210-157]
4. mylka ENSDARG00000034801 133 1.62 0.752 0.868 - - - - - - - myosin, light chain kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8207]
5. si:dkey-15h8.16 ENSDARG00000098613 187 1.605 - 0.816 - - - - 0.789 - - si:dkey-15h8.16 [Source:ZFIN;Acc:ZDB-GENE-050208-707]
6. si:ch211-76l23.4 ENSDARG00000096242 202 1.591 0.752 - - - - - 0.839 - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
7. IRS2 IRS2 485 1.588 - - - - - - 0.760 0.828 -
8. si:dkey-183n20.15 ENSDARG00000094265 190 1.584 - 0.795 - - - - 0.789 - - si:dkey-183n20.15 [Source:ZFIN;Acc:ZDB-GENE-041001-160]
9. zgc:113119 ENSDARG00000089142 281 1.556 - 0.834 - - - 0.722 - - - zgc:113119 [Source:ZFIN;Acc:ZDB-GENE-050327-3]
10. tmem51b ENSDARG00000061916 291 1.53 - 0.704 - - - - 0.826 - - transmembrane protein 51b [Source:ZFIN;Acc:ZDB-GENE-030131-5373]
11. phactr2 ENSDARG00000027172 306 1.517 0.702 - - - - - - 0.815 - phosphatase and actin regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040724-11]
12. rab36 ENSDARG00000014058 70 1.474 - 0.707 - - - - 0.767 - - RAB36, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040910-5]
13. TMEM218 ENSDARG00000027129 716 1.454 - - - - - 0.703 0.751 - - transmembrane protein 218 [Source:ZFIN;Acc:ZDB-GENE-040426-1232]
14. gadd45ab ENSDARG00000104571, ENSDARG00000110532 770 0.954 - - - - - - - 0.954 - growth arrest and DNA-damage-inducible, alpha, b [Source:ZFIN;Acc:ZDB-GENE-040704-60]
15. matk ENSDARG00000074670 225 0.929 - - - - - - - 0.929 - megakaryocyte-associated tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070705-183]
16. fam20b ENSDARG00000008573 1084 0.928 - - - - - - - 0.928 - family with sequence similarity 20, member B (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-040724-125]
17. cyth3 cyth3 120 0.928 - - - - - - 0.928 - -
18. tom1 ENSDARG00000104581 1457 0.92 - 0.920 - - - - - - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
19. prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 0.919 - - - - - - 0.919 - - PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]
20. adamts8a ENSDARG00000007709 75 0.919 - - - - - - 0.919 - - ADAM metallopeptidase with thrombospondin type 1 motif, 8a [Source:ZFIN;Acc:ZDB-GENE-060526-202]
21. zgc:56585 ENSDARG00000026236 704 0.919 - - - - - - - 0.919 - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
22. CPNE8_1 CPNE8_1 140 0.917 - - - - - - - 0.917 -
23. BX323854.3 BX323854.3 62 0.915 - - - - - - 0.915 - -
24. C25H1orf51 C25H1orf51 2460 0.915 - - - - - - 0.915 - -
25. wbp2 ENSDARG00000056605 101 0.914 - - - - - - 0.914 - - WW domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-137]
26. znrf3 ENSDARG00000062573 205 0.913 - - - - - - 0.913 - - zinc and ring finger 3 [Source:ZFIN;Acc:ZDB-GENE-070705-263]
27. si:dkey-152b24.6 ENSDARG00000105043 39 0.91 - - - - - - - 0.910 - si:dkey-152b24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-31]
28. med22 ENSDARG00000014148 1307 0.909 - 0.909 - - - - - - - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
29. MAL2 ENSDARG00000077637 152 0.909 - - - - - - - 0.909 - mal, T cell differentiation protein 2 (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-081022-204]
30. KIF21B ENSDARG00000009733 53 0.907 - - - - - - - 0.907 - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
31. hoxd13a ENSDARG00000059256 1190 0.907 - - - - - - 0.907 - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
32. ba1 69 0.907 - - - - - - - 0.907 - ba1 globin
33. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 0.907 - - - - - - - 0.907 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
34. ppp2r3c ENSDARG00000043972 233 0.906 - - - - - - 0.906 - - protein phosphatase 2, regulatory subunit B'', gamma [Source:ZFIN;Acc:ZDB-GENE-040426-715]
35. zbtb8os ENSDARG00000016368 284 0.905 - - - - - - - 0.905 - zinc finger and BTB domain containing 8 opposite strand [Source:ZFIN;Acc:ZDB-GENE-050417-176]
36. BX511006.2 BX511006.2 29 0.905 - - - - - - - 0.905 -
37. cx40.8 ENSDARG00000071192 105 0.905 - 0.905 - - - - - - - connexin 40.8 [Source:ZFIN;Acc:ZDB-GENE-050616-10]
38. bcl3 ENSDARG00000087832 69 0.904 - - - - - - - 0.904 - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
39. tmprss13b ENSDARG00000077573 47 0.901 - - - - - - - 0.901 - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
40. trmt5 ENSDARG00000069278 228 0.901 - - - - - - - 0.901 - TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
41. srd5a2a ENSDARG00000043587 21 0.901 - - - - - - - 0.901 - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
42. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 0.901 - - - - - - - 0.901 - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
43. stoml3b ENSDARG00000057035 15 0.9 - - - - - - 0.900 - - stomatin (EPB72)-like 3b [Source:ZFIN;Acc:ZDB-GENE-050417-366]
44. SPAG1 SPAG1 44 0.9 - - - - - - 0.900 - -
45. GABRR1 ENSDARG00000043902 71 0.9 - - - - - - - 0.900 - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
46. ubr1 ENSDARG00000060480 71 0.899 - - - - - - - 0.899 - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
47. ZNF784_3 ZNF784_3 44 0.898 - - - - - - 0.898 - -
48. zgc:63972 ENSDARG00000054288, ENSDARG00000112978 78 0.897 - - - - - - 0.897 - - zgc:63972 [Source:ZFIN;Acc:ZDB-GENE-040426-1320]
49. mob3c ENSDARG00000043705 306 0.897 - - - - - - - 0.897 - MOB kinase activator 3C [Source:ZFIN;Acc:ZDB-GENE-040704-32]
50. tbc1d2b ENSDARG00000061986 247 0.897 0.897 - - - - - - - - TBC1 domain family, member 2B [Source:ZFIN;Acc:ZDB-GENE-100922-148]
51. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 0.896 - - - - - - - 0.896 - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
52. snx9a ENSDARG00000000837 424 0.895 - - - - - - 0.895 - - sorting nexin 9a [Source:ZFIN;Acc:ZDB-GENE-030616-66]
53. nphp4 ENSDARG00000069014 77 0.895 - - - - - - - 0.895 - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
54. rab34b ENSDARG00000010977 590 0.895 - - - - - - - 0.895 - RAB34, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-091118-61]
55. THEM6_1 ENSDARG00000103914 469 0.893 - - - - - - - 0.893 - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
56. TMCO6 ENSDARG00000016336, ENSDARG00000111305 221 0.893 - - - - - - - 0.893 - transmembrane and coiled-coil domains 6 [Source:ZFIN;Acc:ZDB-GENE-070410-47]
57. slc5a3a ENSDARG00000010376 134 0.892 - - - - - - - 0.892 - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-090312-3]
58. BX005085.1 ENSDARG00000089947 230 0.892 - - - - - - 0.892 - -
59. si:ch1073-174d20.2 ENSDARG00000079651 171 0.891 - - - - - - - 0.891 - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
60. poc1b ENSDARG00000021110, ENSDARG00000116944 254 0.89 - - - - - - 0.890 - - POC1 centriolar protein B [Source:ZFIN;Acc:ZDB-GENE-031118-54]
61. CT573468.1 CT573468.1 283 0.889 - - - - - - - 0.889 -
62. si:zfos-364h11.1 99 0.888 - - - - - - - 0.888 - si:zfos-364h11.1, transcript variant X4
63. ptn ENSDARG00000102340 229 0.887 - 0.887 - - - - - - - pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
64. zgc:174178 zgc:174178 104 0.887 - - - - - - 0.887 - -
65. slc2a15b ENSDARG00000053269 899 0.886 - - - - - - - 0.886 - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
66. BX469922.1 BX469922.1 133 0.885 - - - - - - - 0.885 -
67. hoxa11a ENSDARG00000104162 283 0.884 - - - - - - - 0.884 - homeobox A11a [Source:ZFIN;Acc:ZDB-GENE-000823-8]
68. lrriq1 ENSDARG00000093781 83 0.884 - - - - - - - 0.884 - leucine-rich repeats and IQ motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-235]
69. PLEKHS1 ENSDARG00000079227 7 0.883 - - - - - - 0.883 - - pleckstrin homology domain containing, family S member 1 [Source:ZFIN;Acc:ZDB-GENE-080204-50]
70. rhot1a ENSDARG00000099996 2059 0.883 - - - - - - - 0.883 - ras homolog family member T1a [Source:ZFIN;Acc:ZDB-GENE-030131-5354]
71. ASPH ENSDARG00000055945 214 0.882 - - - - - - - 0.882 - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
72. nlgn1 ENSDARG00000077710 72 0.882 - - - - - - - 0.882 - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
73. spon2a ENSDARG00000025465, ENSDARG00000115300 294 0.882 - - - - - - - 0.882 - spondin 2a, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-160]
74. zgc:73226 ENSDARG00000023759 120 0.88 - 0.880 - - - - - - - zgc:73226 [Source:ZFIN;Acc:ZDB-GENE-050703-8]
75. myl2b ENSDARG00000053424 226 0.88 - - - - - - 0.880 - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
76. rnf144ab ENSDARG00000042557 136 0.88 - 0.880 - - - - - - - ring finger protein 144ab [Source:ZFIN;Acc:ZDB-GENE-040718-486]
77. CU469544.1 CU469544.1 219 0.879 - - - - - - - 0.879 -
78. ZBTB8A ENSDARG00000059226 98 0.879 - - - - - - - 0.879 - zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
79. zgc:154075 ENSDARG00000067630 284 0.879 - 0.879 - - - - - - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]
80. AKAP13_1 ENSDARG00000079994 444 0.878 - - - - - - 0.878 - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
81. CU302436.4 CU302436.4 310 0.878 - - - - - - 0.878 - -
82. RHBDF1 RHBDF1 131 0.878 - - - - - - - 0.878 -
83. CABZ01078431.1 CABZ01078431.1 183 0.878 - - - - - - - 0.878 -
84. TPMT_1 TPMT_1 214 0.877 - - - - - - - 0.877 -
85. znf142 ENSDARG00000061373 47 0.877 - - - - - - 0.877 - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
86. CU302326.2 CU302326.2 54 0.877 - - - - - - 0.877 - -
87. armc9 ENSDARG00000087299 459 0.877 - - - - - - 0.877 - - armadillo repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-100922-67]
88. myo5aa ENSDARG00000061635, ENSDARG00000116722 280 0.877 - - - - - - - 0.877 - myosin VAa [Source:ZFIN;Acc:ZDB-GENE-041027-2]
89. si:ch211-238e22.4 ENSDARG00000094500 78 0.876 - - - - - - 0.876 - - si:ch211-238e22.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3632]
90. scaper ENSDARG00000023104 491 0.876 - - - - - - - 0.876 - S-phase cyclin A-associated protein in the ER [Source:ZFIN;Acc:ZDB-GENE-060303-5]
91. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.875 - - - - - - - 0.875 - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
92. socs8 socs8 128 0.874 - 0.874 - - - - - - -
93. cnn1b ENSDARG00000102398 40 0.874 - - - - - - - 0.874 - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
94. elac1 ENSDARG00000045095, ENSDARG00000117014 244 0.874 - - - - - - - 0.874 - elaC ribonuclease Z 1 [Source:ZFIN;Acc:ZDB-GENE-040801-246]
95. atrip ENSDARG00000063076 385 0.874 - - - - - - - 0.874 - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
96. GFRAL ENSDARG00000089709 167 0.874 - - - - - - - 0.874 - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
97. lysmd3 ENSDARG00000024693 754 0.874 - - - - - - 0.874 - - LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
98. ppapdc2 ppapdc2 67 0.874 - - - - - - 0.874 - -
99. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 0.871 - - - - - - - 0.871 - zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
100. lysmd1 ENSDARG00000054789 277 0.871 - 0.871 - - - - - - - LysM, putative peptidoglycan-binding, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1094]

There are 721 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA