Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC39

Gene Name Gene ID Reads Annotation
CCDC39 ENSGALG00000021855 23 coiled-coil domain containing 39











Genes with expression patterns similar to CCDC39

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCDC39 ENSGALG00000021855 23 6 - - 1.000 1.000 1.000 - 1.000 1.000 - 1.000 coiled-coil domain containing 39
2. CCDC147 CCDC147 53 1.874 - - - - - - - 0.969 - 0.905
3. CRAT ENSGALG00000037443 78 1.835 - - - - 0.898 - - 0.937 - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
4. PIT-1 PIT-1 8 1.725 - - - 0.725 - - 1.000 - - -
5. SGIP1 ENSGALG00000011113 20 1.688 - - - - - - 0.759 0.929 - - SH3 domain GRB2 like endophilin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25412]
6. MUT ENSGALG00000016697 43 1.587 - - - - - - 0.789 - - 0.798 methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
7. SKTMOD SKTMOD 207 1.503 - - - - - - - 0.771 - 0.732
8. RYR3 ENSGALG00000009705 30 1 - - - - - - 1.000 - - - ryanodine receptor 3 [Source:NCBI gene;Acc:396111]
9. C20orf85 ENSGALG00000027484 3 1 - - - - - - 1.000 - - - chromosome 20 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:16216]
10. ATXN3 ENSGALG00000010766 48 1 - - - - - - 1.000 - - - ataxin 3 [Source:NCBI gene;Acc:378424]
11. MOG ENSGALG00000022875 9 1 - - - - - - 1.000 - - - myelin oligodendrocyte glycoprotein, transcript variant X50
12. RHAG ENSGALG00000016684 2 1 - - - - - - 1.000 - - - Rh associated glycoprotein [Source:NCBI gene;Acc:395118]
13. DNASE2 DNASE2 58 1 - - - - - - 1.000 - - -
14. TRDN ENSGALG00000014848 130 1 - - - - - - 1.000 - - - triadin
15. MBD5 ENSGALG00000012449 27 1 - - - - - - 1.000 - - - methyl-CpG binding domain protein 5 [Source:HGNC Symbol;Acc:HGNC:20444]
16. HGSNAT ENSGALG00000010136 18 1 - - - - - - 1.000 - - - heparan-alpha-glucosaminide N-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:26527]
17. Mar-11 Mar-11 16 1 - - - - - - 1.000 - - -
18. H6PD ENSGALG00000002492 3 1 - - - - - - 1.000 - - - hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4795]
19. GPR97 GPR97 16 1 - - - - - - 1.000 - - -
20. GNPNAT1 ENSGALG00000012414 32 1 - - - 1.000 - - - - - - glucosamine-phosphate N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:19980]
21. C9orf152 C9orf152 3 1 - - - - - - - 1.000 - -
22. ENSGALG00000028652 ENSGALG00000028652 65 1 - - - - - - 1.000 - - -
23. LOC431653 ENSGALG00000025921 4 1 - - - - - - 1.000 - - - LOC431653, transcript variant X3
24. ATP6V1A ENSGALG00000014800 4 1 - - - - - - - 1.000 - - ATPase H+ transporting V1 subunit A [Source:NCBI gene;Acc:395821]
25. SLC2A10 ENSGALG00000004498 421 1 - - - - - - 1.000 - - - solute carrier family 2 member 10 [Source:HGNC Symbol;Acc:HGNC:13444]
26. KLF7 ENSGALG00000008501 2 1 - - - - - - 1.000 - - - Gallus gallus Kruppel like factor 7 (KLF7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318990]
27. HSD3B7 ENSGALG00000045366 12 1 - - - - - - 1.000 - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7, transcript variant X2
28. FAR2 ENSGALG00000017291 16 1 - - - - - - 1.000 - - - fatty acyl-CoA reductase 2 [Source:HGNC Symbol;Acc:HGNC:25531]
29. ZNF804A ENSGALG00000023886 52 1 - - - - - - 1.000 - - - zinc finger protein 804A [Source:HGNC Symbol;Acc:HGNC:21711]
30. AFTPH ENSGALG00000008828 21 1 - - - - - - 1.000 - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
31. MYO1D ENSGALG00000000674 14 1 - - - - - - 1.000 - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
32. CYLD ENSGALG00000003753 11 1 - - - - - - 1.000 - - - CYLD lysine 63 deubiquitinase [Source:HGNC Symbol;Acc:HGNC:2584]
33. CPA6 ENSGALG00000041918 54 1 - - - - - - 1.000 - - - carboxypeptidase A6 [Source:NCBI gene;Acc:420171]
34. GBF1 ENSGALG00000005637 32 1 - - - - - - 1.000 - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4181]
35. SNORD94 SNORD94 10 1 - - - - - - 1.000 - - -
36. GRM8 ENSGALG00000039403 17 1 - - - - - - 1.000 - - - glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]
37. GABRA2 ENSGALG00000014206 19 1 - - - - - - 1.000 - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
38. EIF4ENIF1 ENSGALG00000006898 24 1 - - - - - - 1.000 - - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:HGNC:16687]
39. MTHFD2L ENSGALG00000010855 14 1 - - - - - - 1.000 - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:HGNC Symbol;Acc:HGNC:31865]
40. CHRNA10 ENSGALG00000022702 7 1 - - - - - - 1.000 - - - cholinergic receptor, nicotinic, alpha 10 (neuronal) [Source:NCBI gene;Acc:430628]
41. MLNR ENSGALG00000017003 10 1 - - - - - - - 1.000 - - motilin receptor [Source:NCBI gene;Acc:428072]
42. BDH1B ENSGALG00000006976 9 1 - - - - - - 1.000 - - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
43. PIGR ENSGALG00000000919 3 1 - - - - - - 1.000 - - - polymeric immunoglobulin receptor [Source:NCBI gene;Acc:419848]
44. ENSGALG00000028769 ENSGALG00000028769 11 1 - - - - - - 1.000 - - -
45. C8orf37 ENSGALG00000038971 5 1 - - - - - - 1.000 - - - chromosome 8 open reading frame 37 [Source:HGNC Symbol;Acc:HGNC:27232]
46. CCDC85C 2 1 - - - - - - 1.000 - - - coiled-coil domain containing 85C, transcript variant X1
47. SMAD9 ENSGALG00000017050 11 0.999 - - - - - - - 0.999 - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
48. ADRA2C ENSGALG00000015608 42 0.999 - - - - - - - 0.999 - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
49. CHFR ENSGALG00000002180 17 0.999 - - - - - - - 0.999 - - checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]
50. FAM208B 24 0.996 - - - - 0.996 - - - - - family with sequence similarity 208 member B, transcript variant X3
51. C9ORF9 C9ORF9 13 0.983 - - - - - - - 0.983 - -
52. ABCB11 ENSGALG00000010891 24 0.98 - - - - - - - 0.980 - - ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
53. MCF2 ENSGALG00000006562 59 0.975 - - - - - - - 0.975 - - MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:HGNC:6940]
54. NMRK2 ENSGALG00000025751 57 0.974 - - - - - - - 0.974 - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
55. E2F3 ENSGALG00000012680 21 0.971 - - - - - - - - - 0.971 E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
56. CHRM2 ENSGALG00000012894 21 0.969 - - - - - - - 0.969 - - cholinergic receptor muscarinic 2 [Source:NCBI gene;Acc:418126]
57. MCAM ENSGALG00000030027 26 0.966 - - - - 0.966 - - - - - melanoma cell adhesion molecule [Source:NCBI gene;Acc:448832]
58. PEAK1 ENSGALG00000002759 39 0.966 - - - - - - - - - 0.966 pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
59. TRPA1 ENSGALG00000034751 148 0.965 - - - - - - - 0.965 - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
60. RAMP1 ENSGALG00000003821 389 0.964 - - - - - - - 0.964 - - receptor activity modifying protein 1 [Source:HGNC Symbol;Acc:HGNC:9843]
61. CYR61 ENSGALG00000008661 43 0.962 - - - - 0.962 - - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
62. TICRR ENSGALG00000006631 495 0.959 - - - - - - - 0.959 - - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
63. TDRD12 ENSGALG00000004704 19 0.959 - - - - 0.959 - - - - - tudor domain containing 12, transcript variant X3
64. GRIN1 ENSGALG00000008898 18 0.957 - - - - 0.957 - - - - - glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
65. IRG1 IRG1 21 0.955 - - - - 0.955 - - - - -
66. C10orf67 15 0.955 - - - - 0.955 - - - - - chromosome 10 open reading frame 67, transcript variant X2
67. TJP3 ENSGALG00000000748 45 0.954 - - - - 0.954 - - - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
68. TMCC1 ENSGALG00000008487 65 0.948 - - - - 0.948 - - - - - transmembrane and coiled-coil domain family 1 [Source:HGNC Symbol;Acc:HGNC:29116]
69. ENSGALG00000025953 ENSGALG00000025953 65 0.947 - - - - 0.947 - - - - -
70. PDPR ENSGALG00000002690 45 0.945 - - - - - - - 0.945 - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
71. PHC2 62 0.944 - - - - 0.944 - - - - - polyhomeotic homolog 2
72. CPAMD8 ENSGALG00000003742 151 0.939 - - - - - - - 0.939 - - C3 and PZP like, alpha-2-macroglobulin domain containing 8, transcript variant X3
73. ASTE1 ENSGALG00000036171 155 0.937 - - - - - - - 0.937 - - asteroid homolog 1 (Drosophila), transcript variant X3
74. LMTK2 ENSGALG00000003479 46 0.937 - - - - 0.937 - - - - - lemur tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:17880]
75. KIAA1211 ENSGALG00000013771 135 0.933 - - - - - - 0.933 - - - KIAA1211 [Source:HGNC Symbol;Acc:HGNC:29219]
76. TSPAN14 ENSGALG00000002414 69 0.932 - - - - - - - 0.932 - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
77. LAMP1 ENSGALG00000037697 247 0.932 - - - - - - - 0.932 - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
78. SDCCAG3 1208 0.931 - - - - 0.931 - - - - - serologically defined colon cancer antigen 3
79. SYT10 ENSGALG00000012911 17 0.928 - - - - 0.928 - - - - - synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
80. ENSGALG00000019896 ENSGALG00000019896 3 0.927 - - - - - - - 0.927 - -
81. ERN2 ENSGALG00000027592 186 0.925 - - - - 0.925 - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:NCBI gene;Acc:771230]
82. PDE3A ENSGALG00000013143 28 0.923 - - 0.923 - - - - - - - phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
83. RTDR1 RTDR1 104 0.917 - - - - 0.917 - - - - -
84. LARP4B ENSGALG00000006672 57 0.911 - - - - 0.911 - - - - - La ribonucleoprotein domain family member 4B [Source:HGNC Symbol;Acc:HGNC:28987]
85. CHADL ENSGALG00000011970 42 0.91 - - - - - - - 0.910 - - chondroadherin-like [Source:NCBI gene;Acc:417998]
86. C4orf48 C4orf48 255 0.909 - - - - - - - 0.909 - -
87. HPCAL4 ENSGALG00000003829 75 0.907 - - - - - - - 0.907 - - hippocalcin like 4 [Source:HGNC Symbol;Acc:HGNC:18212]
88. ENSGALG00000024018 ENSGALG00000024018 37 0.907 - - - - 0.907 - - - - -
89. TMEM164 ENSGALG00000008076 734 0.905 - - - - 0.905 - - - - - transmembrane protein 164 [Source:NCBI gene;Acc:422344]
90. SDR42E1 ENSGALG00000005456 586 0.905 - - - - 0.905 - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]
91. MAP3K21 ENSGALG00000011008 54 0.904 - - - - 0.904 - - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
92. ENSGALG00000028221 ENSGALG00000028221 1663 0.902 - - - - 0.902 - - - - -
93. MYL3 ENSGALG00000005448 3379 0.899 - - - - - - 0.899 - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
94. MAPKAPK3 ENSGALG00000002283 30 0.898 - - - - - - - 0.898 - - Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
95. PCNXL4 PCNXL4 58 0.898 - - - - - - - 0.898 - -
96. AANAT ENSGALG00000001955 23 0.894 - - - - 0.894 - - - - - aralkylamine N-acetyltransferase [Source:NCBI gene;Acc:396066]
97. LRP1B ENSGALG00000012407 125 0.89 - - - - 0.890 - - - - - LDL receptor related protein 1B [Source:HGNC Symbol;Acc:HGNC:6693]
98. SSPN ENSGALG00000014042 638 0.89 - - - - - - 0.890 - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
99. KCTD3 ENSGALG00000009678 335 0.888 - - - - - - - - - 0.888 potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
100. MARVELD3 ENSGALG00000012886 155 0.884 - - - - 0.884 - - - - - MARVEL domain containing 3

There are 264 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA