Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC28B

Gene Name Gene ID Reads Annotation
CCDC28B ENSGALG00000003241 459 coiled-coil domain containing 28B [Source:NCBI gene;Acc:419647]











Genes with expression patterns similar to CCDC28B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCDC28B ENSGALG00000003241 459 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 28B [Source:NCBI gene;Acc:419647]
2. PQLC3 ENSGALG00000016449 39 1.959 - - - - - - 1.000 0.959 - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
3. EHF ENSGALG00000007817 11 1.837 - - - - - - 0.838 0.999 - - ETS homologous factor [Source:NCBI gene;Acc:425791]
4. CD3D ENSGALG00000007418 314 1 - - - - - - 1.000 - - - CD3d molecule [Source:NCBI gene;Acc:396518]
5. ENSGALG00000026032 ENSGALG00000026032 1 1 - - - - - - 1.000 - - -
6. GIT1 ENSGALG00000023703 174 1 - - - - - - 1.000 - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:NCBI gene;Acc:417584]
7. GAK ENSGALG00000015352 99 1 - - - - - - 1.000 - - - cyclin G associated kinase [Source:HGNC Symbol;Acc:HGNC:4113]
8. ENSGALG00000023852 ENSGALG00000023852 31 1 - - - - - - 1.000 - - -
9. ASS1 ENSGALG00000023689 327 1 - - - - - - 1.000 - - - argininosuccinate synthase 1 [Source:NCBI gene;Acc:417185]
10. ENSGALG00000023424 ENSGALG00000023424 1 1 - - - - - - 1.000 - - -
11. CCNT2 ENSGALG00000012207 14 1 - - - - - - 1.000 - - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
12. GTSF1 ENSGALG00000001109 15 1 - - - - - - 1.000 - - - gametocyte specific factor 1 [Source:HGNC Symbol;Acc:HGNC:26565]
13. BSX ENSGALG00000006515 1 1 - - - - - - 1.000 - - - brain specific homeobox [Source:NCBI gene;Acc:395183]
14. ENSGALG00000020819 ENSGALG00000020819 2 1 - - - - - - 1.000 - - -
15. ENSGALG00000026666 ENSGALG00000026666 78 1 - - - - - - 1.000 - - -
16. STARD13 ENSGALG00000017065 18 1 - - - - - - 1.000 - - - StAR related lipid transfer domain containing 13, transcript variant X3
17. STXBP5L ENSGALG00000032361 41 1 - - - - - - 1.000 - - - syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
18. HYAL2 ENSGALG00000002138 237 1 - - - - - - 1.000 - - - hyaluronoglucosaminidase 2 [Source:HGNC Symbol;Acc:HGNC:5321]
19. SOX30 ENSGALG00000045860 5 1 - - - - - - 1.000 - - - SRY-box 30 [Source:HGNC Symbol;Acc:HGNC:30635]
20. GPC6 ENSGALG00000016900 13 1 - - - - - - 1.000 - - - glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454]
21. PIKFYVE ENSGALG00000008842 3 1 - - - - - - 1.000 - - - phosphoinositide kinase, FYVE-type zinc finger containing [Source:HGNC Symbol;Acc:HGNC:23785]
22. SNORD95 SNORD95 6 1 - - - - - - 1.000 - - -
23. ENDOD1 ENSGALG00000017205 3 1 - - - - - - 1.000 - - - endonuclease domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29129]
24. AGAP1 ENSGALG00000004045 47 1 - - - - - - 1.000 - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:16922]
25. PDXK ENSGALG00000016205 26 1 - - - - - - 1.000 - - - pyridoxal kinase [Source:NCBI gene;Acc:418549]
26. ENSGALG00000027175 ENSGALG00000027175 3 1 - - - - - - 1.000 - - -
27. ZHX1 ENSGALG00000034999 21 0.999 - - - - - - - 0.999 - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
28. AGO2 ENSGALG00000040957 25 0.999 - - - - - - - 0.999 - - argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
29. FAM167B ENSGALG00000003301 11 0.999 - - - - - - - 0.999 - - family with sequence similarity 167 member B [Source:HGNC Symbol;Acc:HGNC:28133]
30. IL6 ENSGALG00000010915 8 0.999 - - - - - - - 0.999 - - interleukin 6 [Source:NCBI gene;Acc:395337]
31. TTLL7 ENSGALG00000008850 49 0.999 - - - - - - - 0.999 - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
32. IL15RA ENSGALG00000008153 3 0.999 - - - - - - - 0.999 - - interleukin 15 receptor, alpha, transcript variant X2
33. uc uc 37 0.999 - - - - - - - 0.999 - -
34. DCBLD1 ENSGALG00000014907 19 0.999 - - - - - - - 0.999 - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
35. DUS4L ENSGALG00000023661 29 0.999 - - - - - - - 0.999 - - dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]
36. gga-mir-125b gga-mir-125b 146 0.997 - - - - - - - 0.997 - -
37. ANO3 ENSGALG00000013311 16 0.993 - - - - - - - 0.993 - - anoctamin 3 [Source:NCBI gene;Acc:422968]
38. SLC16A4 ENSGALG00000000417 168 0.993 - - - - - - - 0.993 - - solute carrier family 16 member 4 [Source:HGNC Symbol;Acc:HGNC:10925]
39. MAPK8 ENSGALG00000006109 51 0.989 - - - - - - - 0.989 - - mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]
40. ARL16 49 0.985 - - - - - - - 0.985 - - ADP ribosylation factor like GTPase 16, transcript variant X1
41. ZBBX ENSGALG00000028207 59 0.973 - - - - - - - 0.973 - - zinc finger B-box domain containing, transcript variant X5
42. MSL2 ENSGALG00000039294 55 0.97 - - - - - - - 0.970 - - MSL complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:25544]
43. ENSGALG00000020578 ENSGALG00000020578 25 0.965 - - - - - - - 0.965 - -
44. UBE2O ENSGALG00000001971 77 0.964 - - - - - - - 0.964 - - ubiquitin conjugating enzyme E2 O [Source:HGNC Symbol;Acc:HGNC:29554]
45. LCA5 ENSGALG00000015878 160 0.958 - - - - - - - 0.958 - - LCA5, lebercilin [Source:HGNC Symbol;Acc:HGNC:31923]
46. SIK2 ENSGALG00000036873 7 0.956 - - - - - - - 0.956 - - salt inducible kinase 2 [Source:HGNC Symbol;Acc:HGNC:21680]
47. LEO1 ENSGALG00000004696 111 0.953 - - - - - - - 0.953 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:NCBI gene;Acc:769405]
48. SNORD2 SNORD2 51 0.95 - - - - - - - 0.950 - -
49. ASTN1 ENSGALG00000004472 855 0.947 - - - - - - - 0.947 - - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
50. SFMBT2 ENSGALG00000009279 125 0.931 - - - - - - - 0.931 - - Scm like with four mbt domains 2 [Source:HGNC Symbol;Acc:HGNC:20256]
51. DGKE ENSGALG00000003131 17 0.92 - - - - - - - 0.920 - - diacylglycerol kinase epsilon [Source:HGNC Symbol;Acc:HGNC:2852]
52. DUSP11 DUSP11 765 0.919 - - - - - - - 0.919 - -
53. PARP8 ENSGALG00000032991 17 0.915 - - - - - - - 0.915 - - poly(ADP-ribose) polymerase family member 8 [Source:HGNC Symbol;Acc:HGNC:26124]
54. TRAF3IP2 ENSGALG00000015026 26 0.91 - - - - - - - 0.910 - - TRAF3 interacting protein 2, transcript variant X1
55. ENSGALG00000026422 ENSGALG00000026422 34 0.908 - - - - - - - 0.908 - -
56. AZI2 ENSGALG00000011428 24 0.9 - - - - - - - 0.900 - - 5-azacytidine induced 2 [Source:HGNC Symbol;Acc:HGNC:24002]
57. CFTR ENSGALG00000032986 424 0.9 - - - - - - - 0.900 - - cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
58. CCDC171 ENSGALG00000015103 349 0.899 - - - - - - - 0.899 - - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
59. SNCG1 SNCG1 56 0.894 - - - - - - - 0.894 - -
60. CCDC71 ENSGALG00000006787 48 0.891 - - - - - - - 0.891 - - coiled-coil domain containing 71 [Source:HGNC Symbol;Acc:HGNC:25760]
61. ATP11A ENSGALG00000041644 74 0.888 - - - - - - 0.888 - - - ATPase phospholipid transporting 11A [Source:HGNC Symbol;Acc:HGNC:13552]
62. MXRA7 ENSGALG00000001805 945 0.887 - - - - - - - 0.887 - - matrix remodeling associated 7 [Source:HGNC Symbol;Acc:HGNC:7541]
63. ENSGALG00000019568 ENSGALG00000019568 25 0.884 - - - - - - 0.884 - - -
64. ARFGEF1 ENSGALG00000034610 238 0.881 - - - - - - - 0.881 - - ADP ribosylation factor guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:15772]
65. NEFM ENSGALG00000000317 6992 0.881 - - - - - - - 0.881 - - neurofilament medium [Source:NCBI gene;Acc:396206]
66. FIP1L1 ENSGALG00000013943 15 0.877 - - - - - - - 0.877 - - factor interacting with PAPOLA and CPSF1, transcript variant X5
67. CCDC84 ENSGALG00000007689 18 0.877 - - - - - - - 0.877 - - coiled-coil domain containing 84 [Source:HGNC Symbol;Acc:HGNC:30460]
68. KLHL42 ENSGALG00000017296 62 0.873 - - - - - - - 0.873 - - kelch like family member 42 [Source:HGNC Symbol;Acc:HGNC:29252]
69. MCMBP ENSGALG00000009455 90 0.871 - - - - - - - 0.871 - - minichromosome maintenance complex binding protein [Source:NCBI gene;Acc:423933]
70. PCLO 249 0.869 - - - - - - 0.869 - - - piccolo presynaptic cytomatrix protein
71. TJP3 ENSGALG00000000748 45 0.863 - - - - - - - 0.863 - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
72. KIAA1244 KIAA1244 62 0.863 - - - - - - - 0.863 - -
73. PBLD ENSGALG00000003935 105 0.861 - - - - - - - 0.861 - - phenazine biosynthesis like protein domain containing [Source:NCBI gene;Acc:423685]
74. gga-mir-10b ENSGALG00000018331 147 0.851 - - - - - - 0.851 - - - gga-mir-10b [Source:miRBase;Acc:MI0001216]
75. ELMOD2 ENSGALG00000009836 177 0.849 - - - - - - - 0.849 - - ELMO domain containing 2 [Source:NCBI gene;Acc:422449]
76. PDLIM3 ENSGALG00000013414 52 0.847 - - - - - - - 0.847 - - PDZ and LIM domain 3 [Source:NCBI gene;Acc:414873]
77. RND2 ENSGALG00000002804 9 0.839 - - - - - - - 0.839 - - Rho family GTPase 2 [Source:NCBI gene;Acc:428307]
78. EXOC1 ENSGALG00000013778 93 0.835 - - - - - - - 0.835 - - exocyst complex component 1 [Source:HGNC Symbol;Acc:HGNC:30380]
79. RASA1 ENSGALG00000017706 224 0.833 - - - - - - - 0.833 - - RAS p21 protein activator 1
80. INADL INADL 51 0.833 - - - - - - - 0.833 - -
81. TSPAN2 ENSGALG00000002554 32 0.826 - - - - - - - 0.826 - - tetraspanin 2 [Source:HGNC Symbol;Acc:HGNC:20659]
82. NPY ENSGALG00000010983 441 0.826 - - - - - - - 0.826 - - neuropeptide Y [Source:NCBI gene;Acc:396464]
83. PROCR ENSGALG00000006547 645 0.818 - - - - - - - 0.818 - - protein C receptor [Source:NCBI gene;Acc:424867]
84. PLK3 ENSGALG00000010129 933 0.817 - - - - - - - 0.817 - - polo like kinase 3 [Source:HGNC Symbol;Acc:HGNC:2154]
85. TNRC6B ENSGALG00000012050 613 0.816 - - - - - - - 0.816 - - trinucleotide repeat containing 6B, transcript variant X10
86. RGS10 ENSGALG00000009422 10 0.811 - - - - - - - 0.811 - - regulator of G protein signaling 10 [Source:HGNC Symbol;Acc:HGNC:9992]
87. SLITRK4 ENSGALG00000007242 165 0.811 - - - - - - - 0.811 - - SLIT and NTRK like family member 4 [Source:HGNC Symbol;Acc:HGNC:23502]
88. TMEM80 ENSGALG00000045337 775 0.809 - - - - - - - 0.809 - - transmembrane protein 80 [Source:HGNC Symbol;Acc:HGNC:27453]
89. FANCI ENSGALG00000006658 908 0.807 - - - - - - - 0.807 - - Fanconi anemia complementation group I [Source:NCBI gene;Acc:415491]
90. DDI2 115 0.806 - - - - - - - 0.806 - - DNA damage inducible 1 homolog 2, transcript variant X2
91. NCAPD3 ENSGALG00000001491 221 0.805 - - - - - - - 0.805 - - non-SMC condensin II complex subunit D3, transcript variant X3
92. ZFPM2 ENSGALG00000040079 942 0.799 - - - - - - - 0.799 - - zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
93. C1H13ORF27 C1H13ORF27 635 0.798 - - - - - - - 0.798 - -
94. UBXN7 ENSGALG00000006385 28 0.797 - - - - - - - 0.797 - - UBX domain protein 7 [Source:HGNC Symbol;Acc:HGNC:29119]
95. PRKCB ENSGALG00000037943 29 0.791 - - - - - - - 0.791 - - protein kinase C beta [Source:HGNC Symbol;Acc:HGNC:9395]
96. BMP2 ENSGALG00000029301 379 0.786 - - - - - - - 0.786 - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
97. ENSGALG00000019221 ENSGALG00000019221 9 0.776 - - - 0.776 - - - - - -
98. CXorf57 ENSGALG00000008990 31 0.775 - - - - - - 0.775 - - - chromosome X open reading frame 57 [Source:HGNC Symbol;Acc:HGNC:25486]
99. LYST ENSGALG00000032840 96 0.773 - - - - - - - 0.773 - - lysosomal trafficking regulator [Source:HGNC Symbol;Acc:HGNC:1968]
100. RTFDC1 ENSGALG00000007709 1727 0.767 - - - - - - - 0.767 - - replication termination factor 2 domain containing 1 [Source:NCBI gene;Acc:419329]

There are 51 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA