Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC18

Gene Name Gene ID Reads Annotation
CCDC18 ENSGALG00000005889 628 coiled-coil domain containing 18 [Source:NCBI gene;Acc:424497]











Genes with expression patterns similar to CCDC18

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCDC18 ENSGALG00000005889 628 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 coiled-coil domain containing 18 [Source:NCBI gene;Acc:424497]
2. RIPK4 ENSGALG00000040189 102 0.823 - - 0.823 - - - - - - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
3. CD82 ENSGALG00000038217 1266 0.821 - - 0.821 - - - - - - - CD82 molecule [Source:NCBI gene;Acc:423172]
4. ZC4H2 ENSGALG00000042725 361 0.819 - - 0.819 - - - - - - - zinc finger C4H2-type containing, transcript variant X4
5. CD300A CD300A 173 0.817 - - 0.817 - - - - - - -
6. SNED1 ENSGALG00000043596 693 0.813 - - 0.813 - - - - - - - sushi, nidogen and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:24696]
7. NUDT4 ENSGALG00000011285 2998 0.804 - - 0.804 - - - - - - - nudix hydrolase 4, transcript variant X5
8. DVL3 ENSGALG00000008414 38 0.801 - - 0.801 - - - - - - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
9. FMN2 ENSGALG00000031427 77 0.797 - - 0.797 - - - - - - - formin 2 [Source:HGNC Symbol;Acc:HGNC:14074]
10. PHTF2 ENSGALG00000008335 722 0.796 - - 0.796 - - - - - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
11. GALNT11 ENSGALG00000006233 210 0.795 - - 0.795 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
12. PLXNB2 ENSGALG00000039861 338 0.795 - - 0.795 - - - - - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
13. RAB11FIP1 41 0.788 - - 0.788 - - - - - - - RAB11 family interacting protein 1, transcript variant X2
14. ACSF3 ENSGALG00000035225 261 0.784 - - 0.784 - - - - - - - acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
15. NHLRC2 ENSGALG00000008946 387 0.78 - - 0.780 - - - - - - - NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
16. FSCN2 ENSGALG00000023354 13 0.779 - - 0.779 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
17. LLGL1 ENSGALG00000014408 15 0.779 - - 0.779 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
18. MST1 ENSGALG00000002722 994 0.777 - - 0.777 - - - - - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
19. OTOA ENSGALG00000007070 94 0.777 - - 0.777 - - - - - - - otoancorin [Source:HGNC Symbol;Acc:HGNC:16378]
20. CCDC135 CCDC135 220 0.776 - - 0.776 - - - - - - -
21. ENSGALG00000005723 ENSGALG00000005723 36 0.776 - - 0.776 - - - - - - -
22. FAM199X ENSGALG00000008872 44 0.775 - - 0.775 - - - - - - - family with sequence similarity 199, X-linked [Source:HGNC Symbol;Acc:HGNC:25195]
23. SETD5 ENSGALG00000006571 1499 0.774 - - - - - - - 0.774 - - SET domain containing 5 [Source:NCBI gene;Acc:416046]
24. DLX6 ENSGALG00000023195 29 0.773 - - 0.773 - - - - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
25. C3H6ORF203 ENSGALG00000015316 513 0.773 - - 0.773 - - - - - - - chromosome 3 open reading frame, human C6orf203 [Source:NCBI gene;Acc:421779]
26. FAM3B ENSGALG00000016140 111 0.773 - - 0.773 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
27. KLF6 ENSGALG00000033178 679 0.772 - - 0.772 - - - - - - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
28. VTI1B ENSGALG00000009526 133 0.772 - - 0.772 - - - - - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
29. ZZEF1 ENSGALG00000001546 767 0.771 - - 0.771 - - - - - - - zinc finger ZZ-type and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29027]
30. TOX3 ENSGALG00000034649 54 0.77 - - 0.770 - - - - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
31. EML5 ENSGALG00000010639 25 0.77 - - 0.770 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
32. ENSGALG00000026213 ENSGALG00000026213 562 0.769 - - 0.769 - - - - - - -
33. PRC1 ENSGALG00000012836 20 0.769 - - 0.769 - - - - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
34. KPNA5 ENSGALG00000014937 28 0.769 - - 0.769 - - - - - - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
35. VPS53 ENSGALG00000042071 1158 0.768 - - 0.768 - - - - - - - VPS53, GARP complex subunit [Source:NCBI gene;Acc:417622]
36. AHR2 ENSGALG00000023742 21 0.768 - - 0.768 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
37. SEMA3E ENSGALG00000038225 677 0.766 - - - - - 0.766 - - - - semaphorin 3E [Source:NCBI gene;Acc:374089]
38. NUFIP2 ENSGALG00000004042 1122 0.766 - - 0.766 - - - - - - - NUFIP2, FMR1 interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:17634]
39. FAM46A ENSGALG00000035903 891 0.765 - - 0.765 - - - - - - - family with sequence similarity 46 member A [Source:NCBI gene;Acc:421845]
40. CNP1 ENSGALG00000028638 56 0.764 - - 0.764 - - - - - - - C-type natriuretic peptide 1 [Source:NCBI gene;Acc:100499455]
41. DNALI1 ENSGALG00000001996 64 0.764 - - 0.764 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
42. ATXN3 ENSGALG00000010766 48 0.763 - - 0.763 - - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
43. PIP5K1C ENSGALG00000000784 492 0.763 - - 0.763 - - - - - - - Gallus gallus phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (PIP5K1C), mRNA. [Source:RefSeq mRNA;Acc:NM_001319021]
44. ENSGALG00000028778 ENSGALG00000028778 47 0.762 - - 0.762 - - - - - - -
45. ALKBH8 ENSGALG00000017170 699 0.76 - - 0.760 - - - - - - - alkB homolog 8, tRNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:25189]
46. C15orf60 C15orf60 16 0.759 - - 0.759 - - - - - - -
47. DFFB ENSGALG00000036295 88 0.757 - - 0.757 - - - - - - - DNA fragmentation factor subunit beta [Source:NCBI gene;Acc:374158]
48. TBC1D8B ENSGALG00000009040 75 0.757 - - 0.757 - - - - - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
49. MIS12 ENSGALG00000001632 372 0.757 - - 0.757 - - - - - - - MIS12, kinetochore complex component [Source:NCBI gene;Acc:693254]
50. PRMT10 PRMT10 1169 0.756 - - 0.756 - - - - - - -
51. EPHA1 ENSGALG00000014687 174 0.756 - - 0.756 - - - - - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
52. PYGO1 ENSGALG00000004369 527 0.756 - - 0.756 - - - - - - - pygopus family PHD finger 1 [Source:NCBI gene;Acc:415408]
53. HSBP1 ENSGALG00000043039 2365 0.756 - - 0.756 - - - - - - - heat shock factor binding protein 1 [Source:NCBI gene;Acc:415813]
54. SH3BP2 ENSGALG00000015665 431 0.754 - - 0.754 - - - - - - - SH3 domain binding protein 2 [Source:NCBI gene;Acc:422883]
55. BMP2K ENSGALG00000010885 37 0.752 - - 0.752 - - - - - - - BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
56. APH1A ENSGALG00000045163 146 0.752 - - 0.752 - - - - - - - aph-1 homolog A, gamma-secretase subunit [Source:HGNC Symbol;Acc:HGNC:29509]
57. CREB3 ENSGALG00000002523 23 0.751 - - 0.751 - - - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
58. SEC22C ENSGALG00000005268 1151 0.748 - - 0.748 - - - - - - - SEC22 homolog C, vesicle trafficking protein [Source:HGNC Symbol;Acc:HGNC:16828]
59. NUBPL ENSGALG00000009983 3328 0.748 - - 0.748 - - - - - - - nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
60. ZMPSTE24 ENSGALG00000000855 5144 0.742 - - - - - - 0.742 - - - zinc metallopeptidase STE24 [Source:HGNC Symbol;Acc:HGNC:12877]
61. CNKSR1 ENSGALG00000046299 195 0.74 - - 0.740 - - - - - - - connector enhancer of kinase suppressor of Ras 1 [Source:HGNC Symbol;Acc:HGNC:19700]
62. SNX16 ENSGALG00000029678 1104 0.738 - - 0.738 - - - - - - - sorting nexin 16 [Source:NCBI gene;Acc:420202]
63. SCN5A ENSGALG00000006112 137 0.738 - - 0.738 - - - - - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
64. GABRA1 ENSGALG00000001698 120 0.737 - - 0.737 - - - - - - - gamma-aminobutyric acid type A receptor alpha1 subunit [Source:NCBI gene;Acc:374214]
65. PRDM10 632 0.737 - - 0.737 - - - - - - - PR domain 10, transcript variant X10
66. PDZK1IP1 ENSGALG00000010473 551 0.737 - - 0.737 - - - - - - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
67. FAM19A4 ENSGALG00000042228 1724 0.735 - - - - - - 0.735 - - - family with sequence similarity 19 member A4, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21591]
68. SCNM1 ENSGALG00000046607 665 0.735 - - 0.735 - - - - - - - sodium channel modifier 1 [Source:HGNC Symbol;Acc:HGNC:23136]
69. ENSGALG00000026925 ENSGALG00000026925 119 0.734 - - 0.734 - - - - - - -
70. OLFML2A ENSGALG00000001048 1329 0.734 - - - - - - 0.734 - - - olfactomedin like 2A [Source:HGNC Symbol;Acc:HGNC:27270]
71. MAGI2 1111 0.733 - - 0.733 - - - - - - - membrane associated guanylate kinase, WW and PDZ domain containing 2, transcript variant X12
72. PKD2 ENSGALG00000010921 55 0.733 - - 0.733 - - - - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
73. SH2D4A ENSGALG00000010122 206 0.731 - - 0.731 - - - - - - - SH2 domain containing 4A [Source:HGNC Symbol;Acc:HGNC:26102]
74. VAMP3 ENSGALG00000000579 720 0.729 - - 0.729 - - - - - - - vesicle-associated membrane protein 3 [Source:NCBI gene;Acc:419368]
75. CCDC51 ENSGALG00000006465 1845 0.729 - - 0.729 - - - - - - - coiled-coil domain containing 51, transcript variant X1
76. CPSF2 ENSGALG00000010783 5236 0.728 - - 0.728 - - - - - - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
77. WDR5 ENSGALG00000002659 13008 0.727 - - 0.727 - - - - - - - WD repeat domain 5 [Source:NCBI gene;Acc:417144]
78. FANCM ENSGALG00000031182 1030 0.727 - - 0.727 - - - - - - - FA complementation group M [Source:HGNC Symbol;Acc:HGNC:23168]
79. STXBP1 ENSGALG00000040003 157 0.726 - - 0.726 - - - - - - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
80. KIDINS220 ENSGALG00000016409 854 0.726 - - 0.726 - - - - - - - kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
81. ABCC1 ENSGALG00000006646 2596 0.726 - - 0.726 - - - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
82. DGKZ ENSGALG00000008380 5389 0.723 - - 0.723 - - - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
83. ENSGALG00000004127 ENSGALG00000004127 566 0.72 - - 0.720 - - - - - - -
84. ENSGALG00000011942 ENSGALG00000011942 175 0.719 - - 0.719 - - - - - - -
85. FRG1 ENSGALG00000013590 2590 0.719 - - 0.719 - - - - - - - FSHD region gene 1
86. DYNLRB2 ENSGALG00000005402 630 0.718 - - 0.718 - - - - - - - dynein light chain roadblock-type 2 [Source:NCBI gene;Acc:415802]
87. PDHX ENSGALG00000033753 2799 0.718 - - 0.718 - - - - - - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
88. FANCB ENSGALG00000016569 1193 0.717 - - 0.717 - - - - - - - FA complementation group B [Source:NCBI gene;Acc:418628]
89. TMEM132B ENSGALG00000002742 122 0.717 - - 0.717 - - - - - - - transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
90. BECN1 ENSGALG00000002973 1569 0.717 - - 0.717 - - - - - - - beclin 1 [Source:NCBI gene;Acc:420018]
91. RHOG ENSGALG00000026995 4875 0.717 - - - - - - - 0.717 - - ras homolog family member G [Source:HGNC Symbol;Acc:HGNC:672]
92. NRXN1 ENSGALG00000009107 277 0.716 - - 0.716 - - - - - - - neurexin 1 [Source:NCBI gene;Acc:395398]
93. BRWD3 ENSGALG00000007151 3495 0.715 - - 0.715 - - - - - - - bromodomain and WD repeat domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17342]
94. RPRD2 ENSGALG00000014656 939 0.712 - - 0.712 - - - - - - - regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
95. ACAD8 ENSGALG00000001557 2562 0.712 - - 0.712 - - - - - - - acyl-CoA dehydrogenase family member 8 [Source:NCBI gene;Acc:419739]
96. PIGQ ENSGALG00000001985 1584 0.711 - - 0.711 - - - - - - - phosphatidylinositol glycan anchor biosynthesis class Q [Source:HGNC Symbol;Acc:HGNC:14135]
97. DMA DMA 1012 0.711 - - 0.711 - - - - - - -
98. PRKCE ENSGALG00000010000 99 0.71 - - 0.710 - - - - - - - protein kinase C epsilon, transcript variant X1
99. BATF3 ENSGALG00000035516 379 0.71 - - - - - - - 0.710 - - basic leucine zipper ATF-like transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:28915]
100. ANO5 ENSGALG00000003748 3959 0.71 - - 0.710 - - - - - - - anoctamin 5 [Source:NCBI gene;Acc:422973]

There are 9 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA