Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC178

Gene Name Gene ID Reads Annotation
CCDC178 6 coiled-coil domain containing 178, transcript variant X3











Genes with expression patterns similar to CCDC178

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCDC178 6 4 - - 1.000 1.000 - 1.000 - - - 1.000 coiled-coil domain containing 178, transcript variant X3
2. LRRC9 2 2 - - 1.000 - - 1.000 - - - - leucine rich repeat containing 9
3. PSEN2 ENSGALG00000009073 7 1.936 - - 0.936 - - 1.000 - - - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
4. BFIV21 BFIV21 30 1.86 - - 1.000 - - - - - - 0.860
5. CASS4 ENSGALG00000007744 10 1.822 - - 0.822 - - 1.000 - - - - Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]
6. TNFRSF18 ENSGALG00000001882 12 1.737 - - - - - 0.892 - - - 0.845 TNF receptor superfamily member 18 [Source:NCBI gene;Acc:419424]
7. TMEM161B ENSGALG00000010896 36 1 - - - - - 1.000 - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
8. ENSGALG00000014502 ENSGALG00000014502 2 1 - - - - - - - - - 1.000
9. DLL4 ENSGALG00000008514 3 1 - - 1.000 - - - - - - - delta like canonical Notch ligand 4 [Source:HGNC Symbol;Acc:HGNC:2910]
10. ODF2L ENSGALG00000006804 10 1 - - 1.000 - - - - - - - outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
11. SNORD61 SNORD61 12 1 - - - - - 1.000 - - - -
12. PDE6B ENSGALG00000015373 1 1 - - 1.000 - - - - - - - Gallus gallus phosphodiesterase 6B (PDE6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318440]
13. SYT12 ENSGALG00000004306 2 1 - - 1.000 - - - - - - - synaptotagmin 12 [Source:NCBI gene;Acc:422998]
14. ARHGEF17 6 1 - - 1.000 - - - - - - - Rho guanine nucleotide exchange factor 17
15. CRCBL ENSGALG00000025881 3 1 - - - - - 1.000 - - - - cytokine receptor common subunit beta-like, transcript variant X3
16. ENSGALG00000028957 ENSGALG00000028957 7 1 - - 1.000 - - - - - - -
17. TOR1AIP2 ENSGALG00000004017 2 1 - - 1.000 - - - - - - - torsin 1A interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24055]
18. TMEM132D ENSGALG00000002671 12 1 - - - - - 1.000 - - - - transmembrane protein 132D, transcript variant X6
19. VPS9D1 ENSGALG00000023468 1 1 - - - - - 1.000 - - - - VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
20. IL17RA ENSGALG00000033887 0 1 - - - - - 1.000 - - - - Gallus gallus interleukin 17 receptor A (IL17RA), mRNA. [Source:RefSeq mRNA;Acc:NM_001318988]
21. ENSGALG00000026135 ENSGALG00000026135 16 1 - - - - - - - - - 1.000
22. ENSGALG00000013992 ENSGALG00000013992 6 1 - - - - - 1.000 - - - -
23. DUPD1 ENSGALG00000005019 18 1 - - 1.000 - - - - - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:NCBI gene;Acc:423733]
24. HABP2 ENSGALG00000008905 1 1 - - - - - 1.000 - - - - hyaluronan binding protein 2 [Source:NCBI gene;Acc:423898]
25. WDR37 ENSGALG00000006749 44 1 - - - - - 1.000 - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
26. ENSGALG00000011411 ENSGALG00000011411 1 1 - - 1.000 - - - - - - -
27. NT5DC3 ENSGALG00000029746 1 1 - - - - - 1.000 - - - - 5'-nucleotidase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30826]
28. ENSGALG00000028137 ENSGALG00000028137 2 1 - - 1.000 - - - - - - -
29. HIAT1 HIAT1 447 1 - - - - - 1.000 - - - -
30. NOS2 ENSGALG00000038096 7 1 - - 1.000 - - - - - - - nitric oxide synthase 2 [Source:NCBI gene;Acc:395807]
31. IL8 ENSGALG00000026098 16 1 - - - - - - - - - 1.000 interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
32. CRYGS ENSGALG00000006574 9 1 - - 1.000 - - - - - - - crystallin gamma S [Source:NCBI gene;Acc:429134]
33. PASD1 ENSGALG00000009063 0 1 - - - - - 1.000 - - - - PAS domain containing repressor 1, transcript variant X4
34. VSTM2A ENSGALG00000041764 2 1 - - - - - - - - - 1.000 V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
35. ENSGALG00000028833 ENSGALG00000028833 0 1 - - - - - 1.000 - - - -
36. ZNF770 ENSGALG00000009817 27 1 - - 1.000 - - - - - - - zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
37. CNTNAP4 ENSGALG00000023179 13 1 - - 1.000 - - - - - - - contactin associated protein like 4
38. LY96 ENSGALG00000032701 18 1 - - - - - - - - - 1.000 lymphocyte antigen 96 [Source:HGNC Symbol;Acc:HGNC:17156]
39. TMEM56 ENSGALG00000005580 10 1 - - 1.000 - - - - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
40. SLC2A1 ENSGALG00000004889 10 1 - - - - - - - - - 1.000 solute carrier family 2 member 1 [Source:NCBI gene;Acc:396130]
41. PTPN3 ENSGALG00000022909 6 1 - - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
42. ENSGALG00000008598 ENSGALG00000008598 2 1 - - - - - - - - - 1.000
43. AHR2 ENSGALG00000023742 21 1 - - - - - - - - - 1.000 Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
44. KLHL35 ENSGALG00000017332 1 1 - - - - - - - - - 1.000 kelch like family member 35 [Source:HGNC Symbol;Acc:HGNC:26597]
45. APBB1 ENSGALG00000046164 5 1 - - - - - 1.000 - - - - amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]
46. FAM46C 13 1 - - - - - 1.000 - - - - family with sequence similarity 46 member C
47. LOC422320 ENSGALG00000007703 6 1 - - - - - 1.000 - - - - ligand of Numb protein X 2-like, transcript variant X1
48. SNORD53 SNORD53 1 1 - - 1.000 - - - - - - -
49. ARHGEF38 ENSGALG00000010577 1 1 - - 1.000 - - - - - - - Rho guanine nucleotide exchange factor 38, transcript variant X1
50. KCNAB2 ENSGALG00000037241 1 1 - - 1.000 - - - - - - - potassium voltage-gated channel subfamily A regulatory beta subunit 2 [Source:HGNC Symbol;Acc:HGNC:6229]
51. HIVEP3 ENSGALG00000027365 10 1 - - 1.000 - - - - - - - human immunodeficiency virus type I enhancer binding protein 3 [Source:HGNC Symbol;Acc:HGNC:13561]
52. FAM194B FAM194B 1 1 - - - - - 1.000 - - - -
53. PITPNA ENSGALG00000023806, ENSGALG00000035005 8 1 - - - - - 1.000 - - - - phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
54. SLC25A38 ENSGALG00000041275 1 1 - - 1.000 - - - - - - - solute carrier family 25 member 38 [Source:HGNC Symbol;Acc:HGNC:26054]
55. RHOC ENSGALG00000001569 53 1 - - - - - - - - - 1.000 ras homolog family member C [Source:NCBI gene;Acc:395869]
56. TRPM1 ENSGALG00000003849 5 1 - - - - - 1.000 - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
57. SI ENSGALG00000009511 5 1 - - 1.000 - - - - - - - sucrase-isomaltase
58. RAB44 ENSGALG00000000544 6 1 - - 1.000 - - - - - - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
59. CHIC2 ENSGALG00000013931 21 1 - - 1.000 - - - - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
60. GTSF1 ENSGALG00000001109 15 1 - - - - - - - - - 1.000 gametocyte specific factor 1 [Source:HGNC Symbol;Acc:HGNC:26565]
61. CA12 ENSGALG00000003456 62 1 - - - - - 1.000 - - - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
62. C12orf50 ENSGALG00000045093 9 1 - - - - - 1.000 - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
63. SLC4A5 ENSGALG00000032146 3 1 - - - - - - - - - 1.000 solute carrier family 4 member 5 [Source:HGNC Symbol;Acc:HGNC:18168]
64. AMOTL1 ENSGALG00000017208 5 1 - - 1.000 - - - - - - - angiomotin like 1 [Source:HGNC Symbol;Acc:HGNC:17811]
65. TFAP4 ENSGALG00000027823 12 1 - - 1.000 - - - - - - - transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]
66. NMU ENSGALG00000020151 29 1 - - - - - - - - - 1.000 neuromedin U [Source:NCBI gene;Acc:422748]
67. DAPK1 ENSGALG00000012608 17 1 - - - - - 1.000 - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
68. HAAO ENSGALG00000009926 6 1 - - - - - - - - - 1.000 3-hydroxyanthranilate 3,4-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4796]
69. CD5 ENSGALG00000031735 3 1 - - - - - 1.000 - - - - CD5 molecule [Source:NCBI gene;Acc:395757]
70. INTS3 8 1 - - - - - 1.000 - - - - integrator complex subunit 3, transcript variant X2
71. ATP6V1C2 ENSGALG00000016446 3 1 - - 1.000 - - - - - - - ATPase H+ transporting V1 subunit C2 [Source:HGNC Symbol;Acc:HGNC:18264]
72. CDKN2C ENSGALG00000010537 2 1 - - 1.000 - - - - - - - cyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]
73. NRG3 ENSGALG00000042812 10 1 - - - - - 1.000 - - - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
74. TMEM67 ENSGALG00000029287 2 1 - - 1.000 - - - - - - - transmembrane protein 67, transcript variant X2
75. C17orf104 C17orf104 1 1 - - 1.000 - - - - - - -
76. TLL2 ENSGALG00000005519 10 1 - - - - - 1.000 - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
77. CASZ1 ENSGALG00000002888 2 1 - - - - - 1.000 - - - - castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
78. ENSGALG00000008599 ENSGALG00000008599 2 1 - - 1.000 - - - - - - -
79. 5S 5S 0 1 - - - - - 1.000 - - - -
80. CABP4 1 1 - - 1.000 - - - - - - - calcium binding protein 4
81. AOAH ENSGALG00000035505 6 1 - - 1.000 - - - - - - - acyloxyacyl hydrolase [Source:HGNC Symbol;Acc:HGNC:548]
82. GZMA ENSGALG00000013548 22 1 - - - - - 1.000 - - - - granzyme A [Source:NCBI gene;Acc:395108]
83. CACNB4 ENSGALG00000035466 1 1 - - 1.000 - - - - - - - calcium voltage-gated channel auxiliary subunit beta 4 [Source:NCBI gene;Acc:374259]
84. PLCB2 ENSGALG00000042105 2 1 - - 1.000 - - - - - - - phospholipase C beta 2 [Source:HGNC Symbol;Acc:HGNC:9055]
85. ADAMTSL2 ENSGALG00000002955 5 1 - - 1.000 - - - - - - - ADAMTS like 2 [Source:HGNC Symbol;Acc:HGNC:14631]
86. TSNAXIP1 ENSGALG00000001533 9 1 - - 1.000 - - - - - - - translin associated factor X interacting protein 1, transcript variant X2
87. gga-mir-219b ENSGALG00000018278 1 1 - - - - - 1.000 - - - - gga-mir-219b [Source:miRBase;Acc:MI0015382]
88. VANGL2 ENSGALG00000030643 3 1 - - 1.000 - - - - - - - VANGL planar cell polarity protein 2 [Source:HGNC Symbol;Acc:HGNC:15511]
89. FNIP1 ENSGALG00000017462 4 1 - - - - - 1.000 - - - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
90. ACKR4 ENSGALG00000041491 7 1 - - 1.000 - - - - - - - atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]
91. MADCAM1 ENSGALG00000028341 6 1 - - 1.000 - - - - - - - mucosal vascular addressin cell adhesion molecule 1
92. NGB ENSGALG00000010413 0 1 - - - - - 1.000 - - - - neuroglobin [Source:NCBI gene;Acc:428896]
93. CLDN16 ENSGALG00000025821 14 1 - - - - - 1.000 - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
94. MFSD4 MFSD4 1 1 - - 1.000 - - - - - - -
95. ENSGALG00000006582 ENSGALG00000006582 8 1 - - 1.000 - - - - - - -
96. ONECUT3 ENSGALG00000028081 1 1 - - - - - 1.000 - - - - one cut homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13399]
97. C2CD3 ENSGALG00000017314 13 1 - - 1.000 - - - - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
98. ENSGALG00000025761 ENSGALG00000025761 6 1 - - 1.000 - - - - - - -
99. MEIG1 ENSGALG00000000451 12 1 - - 1.000 - - - - - - - meiosis/spermiogenesis associated 1 [Source:NCBI gene;Acc:769589]
100. GRHL2 ENSGALG00000037687 3 1 - - 1.000 - - - - - - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]

There are 206 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA