Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC171

Gene Name Gene ID Reads Annotation
CCDC171 ENSGALG00000015103 349 coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]











Genes with expression patterns similar to CCDC171

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCDC171 ENSGALG00000015103 349 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
2. LEO1 ENSGALG00000004696 111 1.63 - - - - - - - 0.876 - 0.754 LEO1 homolog, Paf1/RNA polymerase II complex component [Source:NCBI gene;Acc:769405]
3. LEMD3 ENSGALG00000009873 347 1.623 - - - - - 0.758 - - 0.865 - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
4. FAM175B 3194 1.56 - - - - - 0.816 - - - 0.744 family with sequence similarity 175 member B, transcript variant X2
5. SMOC2 ENSGALG00000011205 340 1.545 - - - - - 0.831 - - - 0.714 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
6. ALS2 ENSGALG00000008415 2576 1.524 - - 0.743 - - - - - 0.781 - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
7. MYCN ENSGALG00000016462 1930 1.518 - - - - - - - - 0.787 0.731 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
8. INADL INADL 51 1.516 - - - - - - - 0.738 - 0.778
9. CCDC103 CCDC103 362 1.509 - - - - - - - 0.767 0.742 -
10. NAIF1 ENSGALG00000027734 1551 1.505 - - - - - 0.764 - - 0.741 - nuclear apoptosis inducing factor 1 [Source:NCBI gene;Acc:417229]
11. NBR1 ENSGALG00000002765 629 0.913 - - - - - - - - 0.913 - NBR1, autophagy cargo receptor [Source:HGNC Symbol;Acc:HGNC:6746]
12. ASTN1 ENSGALG00000004472 855 0.912 - - - - - - - 0.912 - - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
13. LCA5 ENSGALG00000015878 160 0.908 - - - - - - - 0.908 - - LCA5, lebercilin [Source:HGNC Symbol;Acc:HGNC:31923]
14. MSL2 ENSGALG00000039294 55 0.903 - - - - - - - 0.903 - - MSL complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:25544]
15. FIP1L1 ENSGALG00000013943 15 0.901 - - - - - - - 0.901 - - factor interacting with PAPOLA and CPSF1, transcript variant X5
16. CCDC84 ENSGALG00000007689 18 0.901 - - - - - - - 0.901 - - coiled-coil domain containing 84 [Source:HGNC Symbol;Acc:HGNC:30460]
17. IL15RA ENSGALG00000008153 3 0.899 - - - - - - - 0.899 - - interleukin 15 receptor, alpha, transcript variant X2
18. uc uc 37 0.899 - - - - - - - 0.899 - -
19. AGO2 ENSGALG00000040957 25 0.899 - - - - - - - 0.899 - - argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
20. EHF ENSGALG00000007817 11 0.899 - - - - - - - 0.899 - - ETS homologous factor [Source:NCBI gene;Acc:425791]
21. ZHX1 ENSGALG00000034999 21 0.899 - - - - - - - 0.899 - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
22. TTLL7 ENSGALG00000008850 49 0.899 - - - - - - - 0.899 - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
23. IL6 ENSGALG00000010915 8 0.899 - - - - - - - 0.899 - - interleukin 6 [Source:NCBI gene;Acc:395337]
24. FAM167B ENSGALG00000003301 11 0.899 - - - - - - - 0.899 - - family with sequence similarity 167 member B [Source:HGNC Symbol;Acc:HGNC:28133]
25. DUS4L ENSGALG00000023661 29 0.899 - - - - - - - 0.899 - - dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]
26. CCDC28B ENSGALG00000003241 459 0.899 - - - - - - - 0.899 - - coiled-coil domain containing 28B [Source:NCBI gene;Acc:419647]
27. DCBLD1 ENSGALG00000014907 19 0.899 - - - - - - - 0.899 - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
28. PARP8 ENSGALG00000032991 17 0.897 - - - - - - - 0.897 - - poly(ADP-ribose) polymerase family member 8 [Source:HGNC Symbol;Acc:HGNC:26124]
29. gga-mir-125b gga-mir-125b 146 0.896 - - - - - - - 0.896 - -
30. SIK2 ENSGALG00000036873 7 0.895 - - - - - - - 0.895 - - salt inducible kinase 2 [Source:HGNC Symbol;Acc:HGNC:21680]
31. SLC16A4 ENSGALG00000000417 168 0.891 - - - - - - - 0.891 - - solute carrier family 16 member 4 [Source:HGNC Symbol;Acc:HGNC:10925]
32. ANO3 ENSGALG00000013311 16 0.891 - - - - - - - 0.891 - - anoctamin 3 [Source:NCBI gene;Acc:422968]
33. TRAF3IP2 ENSGALG00000015026 26 0.888 - - - - - - - 0.888 - - TRAF3 interacting protein 2, transcript variant X1
34. DYNLT3 ENSGALG00000016259 340 0.887 - - - - - - - - 0.887 - dynein light chain Tctex-type 3 [Source:NCBI gene;Acc:418580]
35. MAPK8 ENSGALG00000006109 51 0.887 - - - - - - - 0.887 - - mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]
36. AHSA2 1504 0.887 - - - - - - - - 0.887 - AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
37. PSMG2 ENSGALG00000013863 351 0.886 - - - - - - - - 0.886 - proteasome assembly chaperone 2 [Source:HGNC Symbol;Acc:HGNC:24929]
38. UBE2O ENSGALG00000001971 77 0.886 - - - - - - - 0.886 - - ubiquitin conjugating enzyme E2 O [Source:HGNC Symbol;Acc:HGNC:29554]
39. GGA.16412 GGA.16412 846 0.885 - - - - - - - - 0.885 -
40. ZNF236 ENSGALG00000013657 154 0.885 - - - - - 0.885 - - - - zinc finger protein 236 [Source:HGNC Symbol;Acc:HGNC:13028]
41. GNA12 ENSGALG00000004368 692 0.884 - - - - - - - - 0.884 - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
42. ZBBX ENSGALG00000028207 59 0.881 - - - - - - - 0.881 - - zinc finger B-box domain containing, transcript variant X5
43. FAM221A ENSGALG00000010977 695 0.881 - - - - - - - - 0.881 - family with sequence similarity 221 member A [Source:HGNC Symbol;Acc:HGNC:27977]
44. ARL16 49 0.88 - - - - - - - 0.880 - - ADP ribosylation factor like GTPase 16, transcript variant X1
45. RREB1 ENSGALG00000012799 125 0.878 - - - - - - - - 0.878 - ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
46. SMPDL3B ENSGALG00000000737 223 0.876 - - - - - - - - 0.876 - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
47. REXO4 ENSGALG00000030609 2926 0.875 - - - - - - - - 0.875 - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
48. DARS ENSGALG00000012355 2887 0.875 - - - - - - - - 0.875 - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
49. CLCN7 ENSGALG00000030826 3173 0.875 - - - - - - - - 0.875 - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
50. TTPA ENSGALG00000030031 500 0.873 - - - - - - - - 0.873 - alpha tocopherol transfer protein [Source:HGNC Symbol;Acc:HGNC:12404]
51. GPSM1 ENSGALG00000001797 943 0.873 - - - - - - - - 0.873 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
52. ACL ACL 1813 0.873 - - - - - - - - 0.873 -
53. ASNS ENSGALG00000009748 11822 0.865 - - - - - - - - 0.865 - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
54. CEP70 ENSGALG00000012087 7992 0.864 - - - - - - - - 0.864 - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
55. CDERMO-1 CDERMO-1 279 0.864 - - - - - - - - 0.864 -
56. ENSGALG00000020578 ENSGALG00000020578 25 0.862 - - - - - - - 0.862 - -
57. RPS6KA5 ENSGALG00000030580 218 0.862 - - - - - - - - 0.862 - ribosomal protein S6 kinase A5 [Source:NCBI gene;Acc:423408]
58. ELAVL1 ENSGALG00000000726 718 0.862 - - - - - 0.862 - - - - ELAV like RNA binding protein 1 [Source:NCBI gene;Acc:395637]
59. VPS33A ENSGALG00000004440 2030 0.861 - - - - - - - - 0.861 - VPS33A, CORVET/HOPS core subunit, transcript variant X1
60. NLE1 ENSGALG00000004691, ENSGALG00000036963 1239 0.861 - - - - - - - - 0.861 - notchless homolog 1, transcript variant X1
61. SERPINB1 ENSGALG00000019555 29 0.861 - - - - - 0.861 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
62. DIAPH1 DIAPH1 357 0.859 - - - - - - - - 0.859 -
63. PJA2 ENSGALG00000000264 1574 0.859 - - - - - - - - 0.859 - praja ring finger ubiquitin ligase 2, transcript variant X1
64. gga-mir-1466 ENSGALG00000025170 487 0.858 - - - - - - - - 0.858 - gga-mir-1466 [Source:miRBase;Acc:MI0007071]
65. PQLC3 ENSGALG00000016449 39 0.857 - - - - - - - 0.857 - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
66. VTI1A ENSGALG00000008880 279 0.854 - - - - - - - - 0.854 - vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]
67. MXRA7 ENSGALG00000001805 945 0.853 - - - - - - - 0.853 - - matrix remodeling associated 7 [Source:HGNC Symbol;Acc:HGNC:7541]
68. TMEM80 ENSGALG00000045337 775 0.853 - - - - - - - 0.853 - - transmembrane protein 80 [Source:HGNC Symbol;Acc:HGNC:27453]
69. ITGB1BP2 ENSGALG00000005493 628 0.853 - - - - - - - - 0.853 - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
70. NUDT6 ENSGALG00000011834 1309 0.852 - - - - - - - - 0.852 - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
71. CCDC104 CCDC104 6584 0.852 - - - - - - - - 0.852 -
72. SFMBT2 ENSGALG00000009279 125 0.851 - - - - - - - 0.851 - - Scm like with four mbt domains 2 [Source:HGNC Symbol;Acc:HGNC:20256]
73. CARKD CARKD 2914 0.849 - - - - - - - - 0.849 -
74. WDFY1 ENSGALG00000005158 2512 0.849 - - - - - - - - 0.849 - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
75. IPO8 ENSGALG00000012953 499 0.848 - - - - - - - - 0.848 - importin 8 [Source:HGNC Symbol;Acc:HGNC:9853]
76. gga-mir-1725 gga-mir-1725 178 0.847 - - - - - - - - 0.847 -
77. CKLF ENSGALG00000005254 3365 0.847 - - - - - - - - - 0.847 chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
78. TMEM69 ENSGALG00000010279 716 0.847 - - - - - - - - 0.847 - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
79. HSDL1 ENSGALG00000003273 1108 0.847 - - - - - - - - 0.847 - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
80. C16orf93 C16orf93 3351 0.847 - - - - - - - - 0.847 -
81. E4F1 ENSGALG00000005900 1814 0.845 - - - - - 0.845 - - - - E4F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3121]
82. GDE1 ENSGALG00000006916 1040 0.845 - - - - - 0.845 - - - - glycerophosphodiester phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:29644]
83. CLP1 ENSGALG00000007370 2047 0.845 - - - - - - - - 0.845 - cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:423131]
84. CEP104 ENSGALG00000000978 1130 0.844 - - - - - - - - 0.844 - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
85. ELMOD2 ENSGALG00000009836 177 0.844 - - - - - - - 0.844 - - ELMO domain containing 2 [Source:NCBI gene;Acc:422449]
86. SNORD2 SNORD2 51 0.844 - - - - - - - 0.844 - -
87. GNG11 ENSGALG00000029899 327 0.844 - - - - - - - - 0.844 - G protein subunit gamma 11 [Source:NCBI gene;Acc:771999]
88. TULP3 ENSGALG00000013424 2064 0.843 - - - - - - - - 0.843 - tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]
89. PPIP5K2 ENSGALG00000015264 862 0.843 - - - - - - - - 0.843 - diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:29035]
90. KIAA1211 ENSGALG00000013771 135 0.84 - - - - - - - - 0.840 - KIAA1211 [Source:HGNC Symbol;Acc:HGNC:29219]
91. CFTR ENSGALG00000032986 424 0.84 - - - - - - - 0.840 - - cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
92. TDRD7 ENSGALG00000012350 594 0.838 - - - - - - - - 0.838 - tudor domain containing 7 [Source:NCBI gene;Acc:430492]
93. ARL14EP ENSGALG00000012139 4690 0.837 - - - - - - - - 0.837 - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
94. ENSGALG00000014946 ENSGALG00000014946 40 0.835 - - - - - - - - 0.835 -
95. SEP-05_15 SEP-05_15 568 0.835 - - - - - - - - 0.835 -
96. EXOSC8 ENSGALG00000017048 2939 0.835 - - - - - - - - - 0.835 exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
97. DLG3 ENSGALG00000041900 3016 0.835 - - - - - - - - 0.835 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
98. PTCH1 ENSGALG00000012620 4840 0.835 - - - - - 0.835 - - - - patched 1 [Source:NCBI gene;Acc:395806]
99. KIF20B 554 0.834 - - - - - - - - 0.834 - kinesin family member 20B, transcript variant X8
100. NCF1 ENSGALG00000001189 334 0.832 - - - - - - - - 0.832 - neutrophil cytosolic factor 1 [Source:NCBI gene;Acc:417485]

There are 408 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA