Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCDC113

Gene Name Gene ID Reads Annotation
CCDC113 20 coiled-coil domain containing 113, transcript variant X2











Genes with expression patterns similar to CCDC113

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCDC113 20 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 coiled-coil domain containing 113, transcript variant X2
2. ENSGALG00000021517 ENSGALG00000021517 7 1.751 - - - 1.000 - 0.751 - - - -
3. AHR2 ENSGALG00000023742 21 1.734 - - - 0.734 - - - 1.000 - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
4. SLC35D3 ENSGALG00000030545 55 1.652 - - - - 0.870 - - 0.782 - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
5. CYP2U1 ENSGALG00000027908 13 1.61 - - 0.777 - - - - 0.833 - - cytochrome P450 family 2 subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:20582]
6. MASP2 ENSGALG00000003016 35 1.58 - - - - 0.861 - - - - 0.719 mannan binding lectin serine peptidase 2 [Source:NCBI gene;Acc:407089]
7. ATRN ENSGALG00000016034 16 1.551 - - - 0.821 - 0.730 - - - - attractin [Source:HGNC Symbol;Acc:HGNC:885]
8. TCTE1 ENSGALG00000010165 65 1.485 - - 0.766 - - - - - - 0.719 t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
9. H2AFY ENSGALG00000040141 3454 1.442 - - 0.723 - - - - - - 0.719 H2A histone family, member Y [Source:NCBI gene;Acc:395858]
10. JAKMIP3 ENSGALG00000010486 2 1 - - - 1.000 - - - - - - Janus kinase and microtubule interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:23523]
11. ENSGALG00000009123 ENSGALG00000009123 9 1 - - - 1.000 - - - - - -
12. PVRL1 PVRL1 3 1 - - - 1.000 - - - - - -
13. PIT-1 PIT-1 8 1 - - - 1.000 - - - - - -
14. uc_2 uc_2 3 1 - - - 1.000 - - - - - -
15. DPF3 ENSGALG00000009352 7 1 - - - 1.000 - - - - - - double PHD fingers 3 [Source:NCBI gene;Acc:395351]
16. SCN4B ENSGALG00000007409 22 1 - - - 1.000 - - - - - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
17. C1orf170 C1orf170 7 1 - - - 1.000 - - - - - -
18. CDYL2 ENSGALG00000012978 6 1 - - - 1.000 - - - - - - chromodomain Y like 2 [Source:HGNC Symbol;Acc:HGNC:23030]
19. TLX3 ENSGALG00000002191 4 1 - - - 1.000 - - - - - - T cell leukemia homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13532]
20. MYO7B ENSGALG00000001936 1 1 - - - 1.000 - - - - - - myosin VIIB [Source:HGNC Symbol;Acc:HGNC:7607]
21. PIK3CG ENSGALG00000008081 5 1 - - - 1.000 - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:NCBI gene;Acc:417706]
22. ENSGALG00000000819 ENSGALG00000000819 13 1 - - - 1.000 - - - - - -
23. SPARCL1 ENSGALG00000010929 10 1 - - - 1.000 - - - - - - SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]
24. WDR63 ENSGALG00000008696 15 1 - - - 1.000 - - - - - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
25. CD200R1L ENSGALG00000015191 1 1 - - - 1.000 - - - - - - CD200 receptor 1-like, transcript variant X2
26. ARHGEF37 ENSGALG00000039652 28 1 - - - 1.000 - - - - - - Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
27. ZP2 ENSGALG00000002428 10 1 - - - 1.000 - - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
28. OSTN ENSGALG00000007226 33 1 - - - 1.000 - - - - - - osteocrin [Source:NCBI gene;Acc:424907]
29. SLC26A9 ENSGALG00000000745 1 1 - - - 1.000 - - - - - - solute carrier family 26 member 9 [Source:HGNC Symbol;Acc:HGNC:14469]
30. QSOX1 ENSGALG00000003933 184 1 - - - 1.000 - - - - - - quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
31. METTL24 ENSGALG00000041120 60 1 - - - 1.000 - - - - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
32. DNM3 ENSGALG00000033244 6 1 - - - 1.000 - - - - - - dynamin 3 [Source:HGNC Symbol;Acc:HGNC:29125]
33. TVB TVB 11 1 - - - 1.000 - - - - - -
34. DMRT3 ENSGALG00000010161 2 1 - - - 1.000 - - - - - - doublesex and mab-3 related transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:13909]
35. TM4SF1 ENSGALG00000038747 1 1 - - - 1.000 - - - - - - transmembrane 4 L six family member 1 [Source:NCBI gene;Acc:425046]
36. PRSS55 ENSGALG00000016642 1 1 - - - 1.000 - - - - - - protease, serine 55
37. SFMBT1 ENSGALG00000001753 10 1 - - - 1.000 - - - - - - Scm like with four mbt domains 1 [Source:HGNC Symbol;Acc:HGNC:20255]
38. FKHR FKHR 1 1 - - - 1.000 - - - - - -
39. THSD7A ENSGALG00000010718 149 0.97 - - - - - - - 0.970 - - thrombospondin type 1 domain containing 7A [Source:HGNC Symbol;Acc:HGNC:22207]
40. ZFP64 ENSGALG00000038858 177 0.969 - - - - - - - 0.969 - - ZFP64 zinc finger protein [Source:NCBI gene;Acc:419342]
41. GPR132 ENSGALG00000027407 9 0.961 - - - - 0.961 - - - - - G protein-coupled receptor 132, transcript variant X2
42. ENSGALG00000018879 ENSGALG00000018879 9 0.961 - - - - 0.961 - - - - -
43. BRD8 ENSGALG00000037646 100 0.961 - - - - 0.961 - - - - - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
44. DNM1 ENSGALG00000004852 292 0.955 - - - - - - - 0.955 - - dynamin 1 [Source:HGNC Symbol;Acc:HGNC:2972]
45. IRF-4 IRF-4 19 0.951 - - - - 0.951 - - - - -
46. RAB4A ENSGALG00000036218 20 0.947 - - - - 0.947 - - - - - RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
47. LRRC72 9 0.946 - - - - 0.946 - - - - - leucine rich repeat containing 72, transcript variant X4
48. GCNT7 ENSGALG00000007717 11 0.943 - - - - 0.943 - - - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:HGNC Symbol;Acc:HGNC:16099]
49. LOC416530 ENSGALG00000005291 207 0.932 - - - - 0.932 - - - - - uncharacterized LOC416530, transcript variant X1
50. GALNT11 ENSGALG00000006233 210 0.928 - - - - 0.928 - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
51. CHST1 ENSGALG00000008440 156 0.921 - - - - - - - 0.921 - - carbohydrate sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:1969]
52. STXBP5L ENSGALG00000032361 41 0.921 - - - - 0.921 - - - - - syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
53. PITX1 ENSGALG00000030237 842 0.909 - - - - 0.909 - - - - - paired like homeodomain 1 [Source:NCBI gene;Acc:374201]
54. PIK3R3 ENSGALG00000010335 374 0.906 - - - - 0.906 - - - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
55. KSR1 ENSGALG00000005685 78 0.902 - - - - 0.902 - - - - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
56. CHD5 ENSGALG00000000747 365 0.899 - - - - 0.899 - - - - - chromodomain helicase DNA binding protein 5, transcript variant X17
57. ENSGALG00000009329 ENSGALG00000009329 2 0.899 - - - 0.899 - - - - - -
58. SRRD ENSGALG00000005614 234 0.891 - - - - 0.891 - - - - - SRR1 domain containing [Source:NCBI gene;Acc:416908]
59. ZDHHC5 ENSGALG00000007362 296 0.89 - - - - 0.890 - - - - - zinc finger DHHC-type containing 5 [Source:NCBI gene;Acc:423130]
60. XPNPEP2 ENSGALG00000025935 57 0.889 - - - - 0.889 - - - - - X-prolyl aminopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:12823]
61. TSPAN1 106 0.889 - - - - 0.889 - - - - - tetraspanin 1
62. LARP6 ENSGALG00000004046 97 0.873 - - - - 0.873 - - - - - La ribonucleoprotein domain family member 6 [Source:HGNC Symbol;Acc:HGNC:24012]
63. MCOLN3 ENSGALG00000008709 21 0.873 - - - - 0.873 - - - - - mucolipin 3 [Source:HGNC Symbol;Acc:HGNC:13358]
64. PCDH20 ENSGALG00000016934 187 0.864 - - - - 0.864 - - - - - protocadherin 20
65. NHEJ1 ENSGALG00000011335 334 0.863 - - - - 0.863 - - - - - non-homologous end joining factor 1, transcript variant X3
66. UBE2Z ENSGALG00000001315 103 0.862 - - - - 0.862 - - - - - ubiquitin conjugating enzyme E2 Z [Source:HGNC Symbol;Acc:HGNC:25847]
67. LRRC10 ENSGALG00000009976 318 0.858 - - - - 0.858 - - - - - leucine rich repeat containing 10 [Source:HGNC Symbol;Acc:HGNC:20264]
68. SDSL ENSGALG00000008317 55 0.857 - - - - 0.857 - - - - - serine dehydratase like [Source:NCBI gene;Acc:417030]
69. TIE1 ENSGALG00000009957 97 0.854 - - - - - - - - - 0.854 tyrosine kinase with immunoglobulin like and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:11809]
70. ACSS1 ENSGALG00000008632 397 0.848 - - - - 0.848 - - - - - acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]
71. FAS ENSGALG00000006351 461 0.847 - - - - - 0.847 - - - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
72. ANKRD12 ENSGALG00000008399 1724 0.844 - - - - 0.844 - - - - - ankyrin repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:29135]
73. MFSD12 ENSGALG00000000795 1150 0.84 - - - - - 0.840 - - - - major facilitator superfamily domain containing 12 [Source:HGNC Symbol;Acc:HGNC:28299]
74. IKZF1 ENSGALG00000013086 58 0.839 - - - - - 0.839 - - - - IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
75. USP31 ENSGALG00000006286 28 0.835 - - - - - - - 0.835 - - ubiquitin specific peptidase 31 [Source:HGNC Symbol;Acc:HGNC:20060]
76. GSC ENSGALG00000010974 7 0.835 - - - - - 0.835 - - - - goosecoid homeobox [Source:NCBI gene;Acc:396273]
77. PIFO ENSGALG00000023763 11 0.835 - - - - - 0.835 - - - - primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
78. B3GAT1L ENSGALG00000015075 2 0.833 - - - - - - - 0.833 - - beta-1,3-glucuronyltransferase 1-like [Source:NCBI gene;Acc:408180]
79. CDH6 ENSGALG00000012917 17 0.833 - - - - - - - 0.833 - - cadherin 6 [Source:NCBI gene;Acc:414842]
80. PGAP3 ENSGALG00000022030 87 0.833 - - - - - - - 0.833 - - post-GPI attachment to proteins 3 [Source:HGNC Symbol;Acc:HGNC:23719]
81. ENSGALG00000018356 ENSGALG00000018356 22 0.833 - - - - - - - 0.833 - -
82. TIMP2 ENSGALG00000027070 33 0.833 - - - - - - - 0.833 - - TIMP metallopeptidase inhibitor 2 [Source:NCBI gene;Acc:374178]
83. DPH1 ENSGALG00000003082 5 0.833 - - - - - - - 0.833 - - diphthamide biosynthesis 1 [Source:NCBI gene;Acc:417564]
84. VILL ENSGALG00000005763 4 0.833 - - - - - - - 0.833 - - villin like [Source:HGNC Symbol;Acc:HGNC:30906]
85. FAM3D ENSGALG00000007152 4 0.833 - - - - - - - 0.833 - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
86. TG ENSGALG00000039509 19 0.833 - - - - - - - 0.833 - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
87. ANKS3 ENSGALG00000000643 2 0.833 - - - - - - - 0.833 - - ankyrin repeat and sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29422]
88. GTF3C3 ENSGALG00000007958 6 0.833 - - - - - - - 0.833 - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
89. STRA8 ENSGALG00000011722 4 0.833 - - - - - - - 0.833 - - stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
90. SMIM10 SMIM10 2 0.833 - - - - - - - 0.833 - -
91. SLCO4A1 ENSGALG00000005460 109 0.833 - - - - - - - 0.833 - - solute carrier organic anion transporter family member 4A1 [Source:NCBI gene;Acc:419231]
92. MFSD11 ENSGALG00000001777 8 0.833 - - - - - - - 0.833 - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
93. ROPN1L ENSGALG00000013006 97 0.831 - - - - - - - 0.831 - - rhophilin associated tail protein 1 like [Source:HGNC Symbol;Acc:HGNC:24060]
94. SBF1 ENSGALG00000043178 32 0.83 - - - - - - - 0.830 - - SET binding factor 1, transcript variant X12
95. LRRC49 ENSGALG00000004059 29 0.83 - - - - - - - 0.830 - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
96. MKL2 186 0.828 - - - - 0.828 - - - - - MKL1/myocardin like 2, transcript variant X4
97. RGS8 ENSGALG00000026263 124 0.828 - - - - - 0.828 - - - - regulator of G protein signaling 8 [Source:HGNC Symbol;Acc:HGNC:16810]
98. SCG2 ENSGALG00000029819 26 0.825 - - - - - - - 0.825 - - secretogranin II [Source:HGNC Symbol;Acc:HGNC:10575]
99. CENPM ENSGALG00000011914 18 0.821 - - - 0.821 - - - - - - centromere protein M [Source:NCBI gene;Acc:417982]
100. HAND1 ENSGALG00000035104 2351 0.819 - - 0.819 - - - - - - - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]

There are 145 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA