Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CCDC108

Gene Name Gene ID Reads Annotation
CCDC108 CCDC108 74










Genes with expression patterns similar to CCDC108

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CCDC108 CCDC108 74 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CU596012.1 CU596012.1 24 1.839 0.934 - - - 0.905 - - - -
3. ZNF337_17 ZNF337_17 12 1.759 0.975 - 0.784 - - - - - -
4. BX088646.1 BX088646.1 34 1.756 - - - - 0.880 - 0.876 - -
5. vil1 ENSDARG00000040466 81 1.72 0.930 0.790 - - - - - - - villin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-799]
6. FAM163A ENSDARG00000093021 86 1.716 0.968 - 0.748 - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
7. zmynd8 ENSDARG00000007601 405 1.701 0.854 - - - - - 0.847 - - zinc finger, MYND-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-041119-1]
8. lnx2a ENSDARG00000029177, ENSDARG00000112805 121 1.675 0.913 0.762 - - - - - - - ligand of numb-protein X 2a [Source:ZFIN;Acc:ZDB-GENE-060228-2]
9. otc ENSDARG00000062147 95 1.675 0.960 0.715 - - - - - - - ornithine carbamoyltransferase [Source:ZFIN;Acc:ZDB-GENE-070912-422]
10. mtx3 ENSDARG00000090195 42 1.67 0.942 - - 0.728 - - - - - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
11. ARHGAP42 ARHGAP42 53 1.667 0.934 - - - - 0.733 - - -
12. Metazoa_SRP_25 Metazoa_SRP_25 13 1.632 0.899 - - - - 0.733 - - -
13. si:ch211-214j8.12 ENSDARG00000092556 65 1.605 - 0.839 - 0.766 - - - - - si:ch211-214j8.12 [Source:ZFIN;Acc:ZDB-GENE-060526-102]
14. C18H15orf26 C18H15orf26 36 1.604 - - - 0.784 - - 0.820 - -
15. si:ch211-202h22.7 ENSDARG00000073912 18 1.581 - 0.743 - 0.838 - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
16. zgc:193690 34 1.58 - - - - 0.760 - 0.820 - - zgc:193690
17. si:ch211-87m7.2 ENSDARG00000030129 223 1.566 0.763 0.803 - - - - - - - si:ch211-87m7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-153]
18. TSPEAR TSPEAR 9 1.566 - 0.779 0.787 - - - - - -
19. si:dkeyp-104f11.6 ENSDARG00000089158 89 1.549 - - 0.777 0.772 - - - - - si:dkeyp-104f11.6 [Source:ZFIN;Acc:ZDB-GENE-130531-1]
20. mhc1zea ENSDARG00000001470 184 1.541 0.787 - - - - - 0.754 - - major histocompatibility complex class I ZEA [Source:ZFIN;Acc:ZDB-GENE-070705-176]
21. AEBP1 ENSDARG00000091726 1431 1.523 - 0.821 - 0.702 - - - - - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
22. pi4kab ENSDARG00000062823 197 1.522 - 0.790 - - - - 0.732 - - phosphatidylinositol 4-kinase, catalytic, alpha b [Source:ZFIN;Acc:ZDB-GENE-080220-34]
23. per2 ENSDARG00000034503 264 1.519 - 0.784 - - - 0.735 - - - period circadian clock 2 [Source:ZFIN;Acc:ZDB-GENE-011220-2]
24. zbtb38 ENSDARG00000100607 17 1.516 0.809 - - - - - 0.707 - - zinc finger and BTB domain containing 38 [Source:ZFIN;Acc:ZDB-GENE-091204-308]
25. nrros ENSDARG00000071491, ENSDARG00000112102 64 1.515 - 0.770 - - - 0.745 - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
26. CABZ01058646.1 CABZ01058646.1 205 1.514 0.785 0.729 - - - - - - -
27. slc8a4b ENSDARG00000037145 46 1.506 - - - - - 0.773 0.733 - - solute carrier family 8 (sodium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-050809-103]
28. trim8a ENSDARG00000090512 228 1.506 - 0.793 - 0.713 - - - - - tripartite motif containing 8a [Source:ZFIN;Acc:ZDB-GENE-130107-1]
29. si:ch73-196k8.2 si:ch73-196k8.2 427 1.499 0.797 0.702 - - - - - - -
30. grnb ENSDARG00000025081 716 1.497 0.786 0.711 - - - - - - - granulin b [Source:ZFIN;Acc:ZDB-GENE-030131-7393]
31. fgf24 ENSDARG00000037677 242 1.47 - - 0.755 - - 0.715 - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
32. ppp1r11 ENSDARG00000036063 587 1.47 0.733 - 0.737 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:ZFIN;Acc:ZDB-GENE-050417-99]
33. ptk2ba ENSDARG00000022841 19 1.44 - - - - - 0.733 0.707 - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
34. rn7sk ENSDARG00000081270 149 1.439 - - 0.725 0.714 - - - - - RNA, 7SK small nuclear [Source:ZFIN;Acc:ZDB-GENE-090323-1]
35. sez6l ENSDARG00000100594 35 1.432 - - - - 0.725 - 0.707 - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
36. si:dkey-258p11.1 si:dkey-258p11.1 48 1.411 - - 0.704 - - - 0.707 - -
37. si:ch211-117i10.10 si:ch211-117i10.10 18 0.993 0.993 - - - - - - - -
38. tmem168b ENSDARG00000062168 17 0.993 0.993 - - - - - - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
39. zgc:113443 359 0.987 0.987 - - - - - - - - zgc:113443, transcript variant X3
40. thtpa ENSDARG00000063049 286 0.984 0.984 - - - - - - - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
41. si:ch211-110e4.2 si:ch211-110e4.2 12 0.982 0.982 - - - - - - - -
42. grk7b ENSDARG00000055534 17 0.982 0.982 - - - - - - - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
43. gcdhl gcdhl 38 0.982 0.982 - - - - - - - -
44. bfb ENSDARG00000005616, ENSDARG00000110364 30 0.976 0.976 - - - - - - - - complement component bfb [Source:ZFIN;Acc:ZDB-GENE-990415-34]
45. zgc:173837 ENSDARG00000076949 24 0.975 0.975 - - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
46. si:ch73-138i16.1 ENSDARG00000095562 8 0.975 0.975 - - - - - - - - si:ch73-138i16.1 [Source:ZFIN;Acc:ZDB-GENE-070705-208]
47. fasn_1 ENSDARG00000087657 31 0.975 0.975 - - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
48. igsf5 igsf5 85 0.975 0.975 - - - - - - - -
49. CU929356.4 CU929356.4 86 0.975 0.975 - - - - - - - -
50. CT573256.1 ENSDARG00000091657 18 0.975 0.975 - - - - - - - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
51. CREB3L3 CREB3L3 24 0.975 0.975 - - - - - - - -
52. lipt2 ENSDARG00000069852 14 0.975 0.975 - - - - - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
53. CR381673.1 ENSDARG00000098337 7 0.975 0.975 - - - - - - - -
54. lrrc4.2 ENSDARG00000003020 235 0.975 0.975 - - - - - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
55. RAB38 122 0.975 0.975 - - - - - - - - RAB38, member RAS oncogene family
56. emx3 ENSDARG00000020417 85 0.975 0.975 - - - - - - - - empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
57. dao.3 ENSDARG00000035601 15 0.975 0.975 - - - - - - - - D-amino-acid oxidase, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1894]
58. AL928712.1 AL928712.1 101 0.975 0.975 - - - - - - - -
59. SNORD38 SNORD38 171 0.975 0.975 - - - - - - - -
60. MUC5AC MUC5AC 32 0.975 0.975 - - - - - - - -
61. crybb3 ENSDARG00000041301 48 0.975 0.975 - - - - - - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
62. si:ch211-242f23.8 ENSDARG00000087585 22 0.975 0.975 - - - - - - - - si:ch211-242f23.8 [Source:ZFIN;Acc:ZDB-GENE-091204-11]
63. CR848761.1 CR848761.1 4 0.975 0.975 - - - - - - - -
64. si:dkey-199f5.6 ENSDARG00000094400 51 0.975 0.975 - - - - - - - - si:dkey-199f5.6 [Source:ZFIN;Acc:ZDB-GENE-100922-107]
65. TULP2 TULP2 38 0.975 0.975 - - - - - - - -
66. BX908804.1 ENSDARG00000002797 4 0.975 0.975 - - - - - - - -
67. Metazoa_SRP_18 Metazoa_SRP_18 4 0.975 0.975 - - - - - - - -
68. si:dkey-13n15.2 ENSDARG00000061806, ENSDARG00000094417 4 0.975 0.975 - - - - - - - - si:dkey-13n15.2 [Source:ZFIN;Acc:ZDB-GENE-060526-209]
69. si:dkey-197d18.1 si:dkey-197d18.1 4 0.975 0.975 - - - - - - - -
70. si:ch211-67f13.7 ENSDARG00000077845 8 0.975 0.975 - - - - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
71. sntg2 ENSDARG00000101660 19 0.975 0.975 - - - - - - - - syntrophin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-060526-196]
72. PRKCA_1 ENSDARG00000099841 12 0.975 0.975 - - - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
73. ZNF648 ENSDARG00000104823 194 0.975 0.975 - - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
74. fam101a 4 0.975 0.975 - - - - - - - - family with sequence similarity 101, member A
75. SYTL1 ENSDARG00000070094 282 0.975 0.975 - - - - - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
76. si:ch211-76m11.15 ENSDARG00000098979 6 0.975 0.975 - - - - - - - - si:ch211-76m11.15 [Source:ZFIN;Acc:ZDB-GENE-110411-136]
77. GPR180 73 0.975 0.975 - - - - - - - - G protein-coupled receptor 180, transcript variant X2
78. slc24a4b ENSDARG00000067509 33 0.975 0.975 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-081031-75]
79. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 0.975 0.975 - - - - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
80. ap4b1 ENSDARG00000013726 382 0.974 0.974 - - - - - - - - adaptor related protein complex 4 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1284]
81. ches1 ENSDARG00000043553 96 0.971 0.971 - - - - - - - - checkpoint suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-040217-1]
82. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 0.969 0.969 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
83. AP5B1 ENSDARG00000078805 62 0.966 0.966 - - - - - - - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
84. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.964 0.964 - - - - - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
85. si:ch211-126i22.5 ENSDARG00000060911 209 0.963 0.963 - - - - - - - - si:ch211-126i22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-183]
86. cspg5b ENSDARG00000099793 67 0.963 0.963 - - - - - - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
87. pms2 ENSDARG00000075672, ENSDARG00000115929 248 0.963 0.963 - - - - - - - - PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]
88. zgc:172106 ENSDARG00000017984 90 0.963 0.963 - - - - - - - - zgc:172106 [Source:ZFIN;Acc:ZDB-GENE-080204-42]
89. TRIM35_10 TRIM35_10 484 0.961 0.961 - - - - - - - -
90. eng2a eng2a 186 0.96 0.960 - - - - - - - -
91. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 0.96 0.960 - - - - - - - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
92. PLLP ENSDARG00000062756, ENSDARG00000109949 114 0.96 0.960 - - - - - - - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
93. mir130b 180 0.952 0.952 - - - - - - - - microRNA 130b
94. si:dkey-6f10.3 ENSDARG00000093660 116 0.95 0.950 - - - - - - - - si:dkey-6f10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-339]
95. CABZ01054965.1 ENSDARG00000090844 74 0.95 0.950 - - - - - - - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
96. park2 42 0.949 0.949 - - - - - - - - parkin RBR E3 ubiquitin protein ligase
97. tspear tspear 166 0.949 0.949 - - - - - - - -
98. plcd1a ENSDARG00000059123 46 0.949 0.949 - - - - - - - - phospholipase C, delta 1a [Source:ZFIN;Acc:ZDB-GENE-071004-78]
99. si:dkey-270b7.1 si:dkey-270b7.1 83 0.943 0.943 - - - - - - - -
100. ASPH ENSDARG00000055945 214 0.942 0.942 - - - - - - - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]

There are 1159 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA