Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CCBE1

Gene Name Gene ID Reads Annotation
CCBE1 ENSGALG00000027785 295 collagen and calcium binding EGF domains 1 [Source:HGNC Symbol;Acc:HGNC:29426]











Genes with expression patterns similar to CCBE1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCBE1 ENSGALG00000027785 295 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 collagen and calcium binding EGF domains 1 [Source:HGNC Symbol;Acc:HGNC:29426]
2. CNKSR1 ENSGALG00000046299 195 1.542 - - 0.764 - - - - 0.778 - - connector enhancer of kinase suppressor of Ras 1 [Source:HGNC Symbol;Acc:HGNC:19700]
3. CD82 ENSGALG00000038217 1266 0.818 - - 0.818 - - - - - - - CD82 molecule [Source:NCBI gene;Acc:423172]
4. NHLRC2 ENSGALG00000008946 387 0.808 - - 0.808 - - - - - - - NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
5. TBC1D8B ENSGALG00000009040 75 0.794 - - 0.794 - - - - - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
6. PCDH17 ENSGALG00000016941 1006 0.784 - - - 0.784 - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
7. CDKN2AIP ENSGALG00000010661 1218 0.783 - - 0.783 - - - - - - - CDKN2A interacting protein [Source:HGNC Symbol;Acc:HGNC:24325]
8. APH1A ENSGALG00000045163 146 0.778 - - 0.778 - - - - - - - aph-1 homolog A, gamma-secretase subunit [Source:HGNC Symbol;Acc:HGNC:29509]
9. BMP2K ENSGALG00000010885 37 0.772 - - 0.772 - - - - - - - BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
10. CEP76 ENSGALG00000013858 1809 0.769 - - 0.769 - - - - - - - centrosomal protein 76
11. FSCN2 ENSGALG00000023354 13 0.764 - - 0.764 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
12. ENSGALG00000005723 ENSGALG00000005723 36 0.764 - - 0.764 - - - - - - -
13. FRMD3 ENSGALG00000012577 999 0.756 - - - 0.756 - - - - - - FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
14. RAB11FIP1 41 0.755 - - 0.755 - - - - - - - RAB11 family interacting protein 1, transcript variant X2
15. FAM46A ENSGALG00000035903 891 0.752 - - 0.752 - - - - - - - family with sequence similarity 46 member A [Source:NCBI gene;Acc:421845]
16. ENSGALG00000028778 ENSGALG00000028778 47 0.751 - - 0.751 - - - - - - -
17. KLF6 ENSGALG00000033178 679 0.749 - - 0.749 - - - - - - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
18. CCDC51 ENSGALG00000006465 1845 0.748 - - 0.748 - - - - - - - coiled-coil domain containing 51, transcript variant X1
19. FAM3B ENSGALG00000016140 111 0.745 - - 0.745 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
20. FMN2 ENSGALG00000031427 77 0.743 - - 0.743 - - - - - - - formin 2 [Source:HGNC Symbol;Acc:HGNC:14074]
21. FAM199X ENSGALG00000008872 44 0.742 - - 0.742 - - - - - - - family with sequence similarity 199, X-linked [Source:HGNC Symbol;Acc:HGNC:25195]
22. VPS39 ENSGALG00000008991 4018 0.742 - - 0.742 - - - - - - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
23. PAM ENSGALG00000015256 3399 0.741 - - 0.741 - - - - - - - peptidylglycine alpha-amidating monooxygenase [Source:HGNC Symbol;Acc:HGNC:8596]
24. LMINA ENSGALG00000006083 760 0.741 - - - - - - 0.741 - - - lamin-L(III)-like, transcript variant X2
25. LLGL1 ENSGALG00000014408 15 0.739 - - 0.739 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
26. PLXNB2 ENSGALG00000039861 338 0.739 - - 0.739 - - - - - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
27. SPRY1 ENSGALG00000042067 48 0.739 - - - - - 0.739 - - - - sprouty RTK signaling antagonist 1 [Source:NCBI gene;Acc:395583]
28. ZZEF1 ENSGALG00000001546 767 0.736 - - 0.736 - - - - - - - zinc finger ZZ-type and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29027]
29. RMDN3 ENSGALG00000035242 680 0.735 - - 0.735 - - - - - - - regulator of microtubule dynamics 3 [Source:HGNC Symbol;Acc:HGNC:25550]
30. OTOA ENSGALG00000007070 94 0.732 - - 0.732 - - - - - - - otoancorin [Source:HGNC Symbol;Acc:HGNC:16378]
31. ZDHHC15 ENSGALG00000007800 24 0.729 - - - - - - - - - 0.729 zinc finger DHHC-type containing 15 [Source:HGNC Symbol;Acc:HGNC:20342]
32. FAM76B ENSGALG00000017202 688 0.729 - - 0.729 - - - - - - - family with sequence similarity 76 member B [Source:HGNC Symbol;Acc:HGNC:28492]
33. C3H6ORF203 ENSGALG00000015316 513 0.727 - - 0.727 - - - - - - - chromosome 3 open reading frame, human C6orf203 [Source:NCBI gene;Acc:421779]
34. EML5 ENSGALG00000010639 25 0.727 - - 0.727 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
35. ST3GAL3 ENSGALG00000010083 935 0.726 - - - - - - 0.726 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3 [Source:NCBI gene;Acc:424572]
36. CPSF2 ENSGALG00000010783 5236 0.726 - - 0.726 - - - - - - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
37. AHR2 ENSGALG00000023742 21 0.725 - - 0.725 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
38. DNALI1 ENSGALG00000001996 64 0.724 - - 0.724 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
39. ADAM10 ENSGALG00000004212 568 0.724 - - 0.724 - - - - - - - ADAM metallopeptidase domain 10 [Source:NCBI gene;Acc:374113]
40. C15orf60 C15orf60 16 0.723 - - 0.723 - - - - - - -
41. HRH1 ENSGALG00000004930 13 0.722 - - - - - - - - - 0.722 histamine receptor H1 [Source:HGNC Symbol;Acc:HGNC:5182]
42. KCNK3 ENSGALG00000025971 2 0.722 - - - - - - - - - 0.722 potassium two pore domain channel subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:6278]
43. NOD1 ENSGALG00000036807 10 0.722 - - - - - - - - - 0.722 Gallus gallus nucleotide binding oligomerization domain containing 1 (NOD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318438]
44. ENSGALG00000026498 ENSGALG00000026498 1 0.722 - - - - - - - - - 0.722
45. NPBWR1 ENSGALG00000015261 6 0.722 - - - - - - - - - 0.722 Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
46. AIM1 51 0.722 - - - - - - - - - 0.722 absent in melanoma 1, transcript variant X2
47. FBXO15 ENSGALG00000013720 4 0.722 - - - - - - - - - 0.722 F-box protein 15 [Source:HGNC Symbol;Acc:HGNC:13617]
48. ZNF777 ENSGALG00000038657 3 0.722 - - - - - - - - - 0.722 zinc finger protein 777 [Source:HGNC Symbol;Acc:HGNC:22213]
49. TELO2 ENSGALG00000009297 1 0.722 - - - - - - - - - 0.722 telomere maintenance 2 [Source:HGNC Symbol;Acc:HGNC:29099]
50. SYNPO ENSGALG00000027330 5 0.722 - - - - - - - - - 0.722 synaptopodin [Source:HGNC Symbol;Acc:HGNC:30672]
51. KIAA1755 3 0.722 - - - - - - - - - 0.722 KIAA1755 ortholog, transcript variant X2
52. B3GALT2 ENSGALG00000002477 13 0.722 - - - - - - - - - 0.722 beta-1,3-galactosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:917]
53. NUDT4 ENSGALG00000011285 2998 0.722 - - 0.722 - - - - - - - nudix hydrolase 4, transcript variant X5
54. SPTB ENSGALG00000036805 6 0.722 - - - - - - - - - 0.722 spectrin beta, erythrocytic [Source:HGNC Symbol;Acc:HGNC:11274]
55. ENSGALG00000018929 ENSGALG00000018929 1 0.722 - - - - - - - - - 0.722
56. KCNQ3 ENSGALG00000037626 6 0.722 - - - - - - - - - 0.722 potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
57. GALNT11 ENSGALG00000006233 210 0.722 - - 0.722 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
58. PDGFRL ENSGALG00000013617 11 0.722 - - - - - - - - - 0.722 platelet derived growth factor receptor like [Source:HGNC Symbol;Acc:HGNC:8805]
59. ENSGALG00000006495 ENSGALG00000006495 4 0.722 - - - - - - - - - 0.722
60. CNIH3 ENSGALG00000009308 2 0.722 - - - - - - - - - 0.722 cornichon family AMPA receptor auxiliary protein 3 [Source:HGNC Symbol;Acc:HGNC:26802]
61. LPAR5 ENSGALG00000014455 10 0.722 - - - - - - - - - 0.722 lysophosphatidic acid receptor 5 [Source:HGNC Symbol;Acc:HGNC:13307]
62. PRC1 ENSGALG00000012836 20 0.721 - - 0.721 - - - - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
63. ALKBH8 ENSGALG00000017170 699 0.721 - - 0.721 - - - - - - - alkB homolog 8, tRNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:25189]
64. PYGO1 ENSGALG00000004369 527 0.72 - - 0.720 - - - - - - - pygopus family PHD finger 1 [Source:NCBI gene;Acc:415408]
65. DVL3 ENSGALG00000008414 38 0.719 - - 0.719 - - - - - - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
66. VTI1B ENSGALG00000009526 133 0.718 - - 0.718 - - - - - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
67. HSPH1 ENSGALG00000017077 735 0.717 - - 0.717 - - - - - - - heat shock protein family H (Hsp110) member 1 [Source:NCBI gene;Acc:418917]
68. ATXN3 ENSGALG00000010766 48 0.717 - - 0.717 - - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
69. PHTF2 ENSGALG00000008335 722 0.713 - - 0.713 - - - - - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
70. FBXL16 ENSGALG00000002443 11 0.713 - - - - - - - - - 0.713 F-box and leucine rich repeat protein 16 [Source:NCBI gene;Acc:416405]
71. DLX6 ENSGALG00000023195 29 0.713 - - 0.713 - - - - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
72. KPNA5 ENSGALG00000014937 28 0.71 - - 0.710 - - - - - - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
73. TOX3 ENSGALG00000034649 54 0.71 - - 0.710 - - - - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
74. MIS12 ENSGALG00000001632 372 0.708 - - 0.708 - - - - - - - MIS12, kinetochore complex component [Source:NCBI gene;Acc:693254]
75. SCNM1 ENSGALG00000046607 665 0.707 - - 0.707 - - - - - - - sodium channel modifier 1 [Source:HGNC Symbol;Acc:HGNC:23136]
76. THNSL1 ENSGALG00000007677 287 0.706 - - 0.706 - - - - - - - threonine synthase like 1 [Source:HGNC Symbol;Acc:HGNC:26160]
77. DFFB ENSGALG00000036295 88 0.706 - - 0.706 - - - - - - - DNA fragmentation factor subunit beta [Source:NCBI gene;Acc:374158]
78. CD300A CD300A 173 0.706 - - 0.706 - - - - - - -
79. KCNJ3 ENSGALG00000012537 6 0.704 - - - - - - - - - 0.704 potassium voltage-gated channel subfamily J member 3 [Source:NCBI gene;Acc:396369]
80. CHMP1A ENSGALG00000006161 4195 0.703 - - - 0.703 - - - - - - charged multivesicular body protein 1A [Source:NCBI gene;Acc:415841]
81. TMEM132B ENSGALG00000002742 122 0.702 - - 0.702 - - - - - - - transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
82. SEC22C ENSGALG00000005268 1151 0.702 - - 0.702 - - - - - - - SEC22 homolog C, vesicle trafficking protein [Source:HGNC Symbol;Acc:HGNC:16828]
83. CREB3 ENSGALG00000002523 23 0.7 - - 0.700 - - - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA