Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CBX3

Gene Name Gene ID Reads Annotation
CBX3 ENSGALG00000011038 40977 chromobox 3 [Source:NCBI gene;Acc:395355]











Genes with expression patterns similar to CBX3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CBX3 ENSGALG00000011038 40977 9 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 chromobox 3 [Source:NCBI gene;Acc:395355]
2. DHX36 ENSGALG00000043082 17619 1.751 - - - 0.783 - - 0.968 - - - DEAH-box helicase 36 [Source:HGNC Symbol;Acc:HGNC:14410]
3. WDYHV1 ENSGALG00000030059 2961 1.747 - - - 0.783 - - 0.964 - - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
4. KIF2A ENSGALG00000014737 16391 1.723 - - - - 0.755 - 0.968 - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
5. TM9SF3 ENSGALG00000005534 15290 1.541 - - - 0.823 0.718 - - - - - transmembrane 9 superfamily member 3
6. UMPS ENSGALG00000011770 11331 1.444 - - - 0.727 0.717 - - - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
7. CWC15 ENSGALG00000017207 30922 0.988 - - - - - - 0.988 - - - CWC15 spliceosome associated protein homolog [Source:NCBI gene;Acc:418996]
8. UBE2C ENSGALG00000026380 27639 0.988 - - - - - - 0.988 - - - ubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]
9. ENSGALG00000021694 ENSGALG00000021694 26011 0.984 - - - - - - 0.984 - - -
10. TRA2B ENSGALG00000006531 40566 0.983 - - - - - - 0.983 - - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
11. EEF1E1 ENSGALG00000012781 22615 0.983 - - - - - - 0.983 - - - eukaryotic translation elongation factor 1 epsilon 1
12. PSMA7 ENSGALG00000030411 42436 0.982 - - - - - - 0.982 - - - proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
13. ATF4 ENSGALG00000012135 53361 0.98 - - - - - - 0.980 - - - activating transcription factor 4 [Source:NCBI gene;Acc:395693]
14. AURKAIP1 ENSGALG00000001555 14715 0.979 - - - - - - 0.979 - - - aurora kinase A interacting protein 1 [Source:NCBI gene;Acc:419415]
15. ARCN1 ENSGALG00000007430 21499 0.972 - - - - - - 0.972 - - - archain 1 [Source:NCBI gene;Acc:770561]
16. HSPA14 ENSGALG00000035201 7372 0.971 - - - - - - 0.971 - - - heat shock protein family A (Hsp70) member 14
17. C1H21ORF33 ENSGALG00000019171 8910 0.97 - - - - - - 0.970 - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
18. NAP1L4 ENSGALG00000006446 10868 0.97 - - - - - - 0.970 - - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
19. DYNLRB1 ENSGALG00000034509 28361 0.97 - - - - - - 0.970 - - - dynein light chain roadblock-type 1
20. TDP2 ENSGALG00000013637 6595 0.97 - - - - - - 0.970 - - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
21. gga-mir-762 ENSGALG00000025437 24823 0.97 - - - - - - 0.970 - - - gga-mir-762 [Source:miRBase;Acc:MI0008209]
22. PRRX1 ENSGALG00000003324 4859 0.969 - - - - - - 0.969 - - - paired related homeobox 1 [Source:NCBI gene;Acc:373941]
23. MAPKAPK2 ENSGALG00000000883 6174 0.969 - - - - - - 0.969 - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
24. RPL39 ENSGALG00000008620 63315 0.968 - - - - - - 0.968 - - - ribosomal protein L39 [Source:NCBI gene;Acc:374132]
25. MRPS27 ENSGALG00000015002 6541 0.968 - - - - - - 0.968 - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
26. BRT-1 BRT-1 26083 0.967 - - - - - - 0.967 - - -
27. CHMP4B ENSGALG00000002095 17422 0.967 - - - - - - 0.967 - - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
28. ENSGALG00000001861 ENSGALG00000001861 10150 0.966 - - - - - - 0.966 - - -
29. THBS4 ENSGALG00000014804 4228 0.966 - - - - - - 0.966 - - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
30. KIAA0922 4430 0.966 - - - - - - 0.966 - - - KIAA0922, transcript variant X4
31. RAP1GDS1 ENSGALG00000012222 10078 0.965 - - - - - - 0.965 - - - rap1 GTPase-GDP dissociation stimulator 1 [Source:NCBI gene;Acc:422701]
32. DNMT3B ENSGALG00000041461 12959 0.965 - - - - - - 0.965 - - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
33. UTP14A ENSGALG00000024039 8532 0.964 - - - - - - 0.964 - - - UTP14A small subunit processome component
34. PIK3C2B ENSGALG00000037043 4522 0.963 - - - - - - 0.963 - - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
35. TUSC3 ENSGALG00000013674 2848 0.963 - - - - - - 0.963 - - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
36. ECE-1 ECE-1 3057 0.963 - - - - - - 0.963 - - -
37. PRRC2B 1997 0.963 - - - - - - 0.963 - - - proline rich coiled-coil 2B, transcript variant X12
38. GBX-1 GBX-1 1430 0.962 - - - - - - 0.962 - - -
39. MTX2 ENSGALG00000009264 17304 0.962 - - - - - - 0.962 - - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
40. AP2M1 ENSGALG00000008432 16249 0.958 - - - - - - 0.958 - - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
41. ANP32B ENSGALG00000037483 190705 0.948 - - - - - - 0.948 - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
42. KIAA1432 KIAA1432 1792 0.934 - - - 0.934 - - - - - -
43. IFT43 ENSGALG00000020415 1218 0.931 - - - 0.931 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
44. ZBTB17 ENSGALG00000035352 280 0.93 - - - 0.930 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
45. ENSGALG00000027412 ENSGALG00000027412 202 0.93 - - - 0.930 - - - - - -
46. SNORA31 SNORA31 183 0.929 - - - 0.929 - - - - - -
47. VWDE ENSGALG00000042443 160 0.929 - - - 0.929 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
48. ADCY9 ENSGALG00000007779 766 0.929 - - - 0.929 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
49. MLH3 ENSGALG00000010304 231 0.928 - - - 0.928 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
50. TBK1 ENSGALG00000009840 1650 0.927 - - - 0.927 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
51. DPY30 ENSGALG00000010621 6818 0.927 - - - 0.927 - - - - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
52. GFPT2 ENSGALG00000039705 562 0.925 - - - 0.925 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
53. CA3 CA3 200 0.925 - - - 0.925 - - - - - -
54. TGS1 ENSGALG00000015340 5897 0.924 - - - 0.924 - - - - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
55. RNPC3 ENSGALG00000005162 269 0.924 - - - 0.924 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
56. DBN1 ENSGALG00000033405 216 0.924 - - - 0.924 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
57. FRRS1 ENSGALG00000005418 332 0.922 - - - 0.922 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
58. ASRGL1 ENSGALG00000015949 403 0.922 - - - 0.922 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
59. KIF6 ENSGALG00000010057 84 0.921 - - - 0.921 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
60. ITGA9 ENSGALG00000029378 415 0.921 - - - 0.921 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
61. PRKD1 ENSGALG00000009900 2094 0.919 - - - 0.919 - - - - - - protein kinase D1 [Source:NCBI gene;Acc:423302]
62. HINT3 ENSGALG00000044342 5674 0.918 - - - 0.918 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
63. TRIM62 ENSGALG00000028437 5124 0.917 - - - 0.917 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
64. WDR96 WDR96 255 0.916 - - - 0.916 - - - - - -
65. GUF1 ENSGALG00000014217 211 0.913 - - - 0.913 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
66. LRRCC1 ENSGALG00000039499 480 0.911 - - - 0.911 - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
67. ELMOD1 ENSGALG00000017169 2303 0.91 - - - 0.910 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
68. NCOA3 ENSGALG00000004570 243 0.91 - - - 0.910 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
69. PANK1 ENSGALG00000006431 2910 0.91 - - - 0.910 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
70. HPS5 ENSGALG00000027716 2466 0.908 - - - 0.908 - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
71. ITPKB ENSGALG00000009068 324 0.908 - - - 0.908 - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
72. TMOD1 ENSGALG00000002125 933 0.908 - - - 0.908 - - - - - - tropomodulin 1 [Source:NCBI gene;Acc:395883]
73. CHCHD3 ENSGALG00000006489 18592 0.907 - - - 0.907 - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
74. ASPH ENSGALG00000030112 1622 0.907 - - - 0.907 - - - - - - aspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]
75. PRDM4 ENSGALG00000012619 876 0.907 - - - 0.907 - - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
76. KIN ENSGALG00000030702 1608 0.907 - - - 0.907 - - - - - - Kin17 DNA and RNA binding protein [Source:HGNC Symbol;Acc:HGNC:6327]
77. DEPDC5 ENSGALG00000006766 1592 0.904 - - - 0.904 - - - - - - DEP domain containing 5, transcript variant X6
78. GALNT12 ENSGALG00000013197 1330 0.903 - - - 0.903 - - - - - - polypeptide N-acetylgalactosaminyltransferase 12 [Source:HGNC Symbol;Acc:HGNC:19877]
79. PASK ENSGALG00000006016 3096 0.902 - - - 0.902 - - - - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
80. COPA ENSGALG00000009153 11618 0.902 - - - 0.902 - - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
81. VPS13B 2293 0.901 - - - 0.901 - - - - - - vacuolar protein sorting 13 homolog B
82. NDUFAF6 ENSGALG00000040366 1647 0.901 - - - 0.901 - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:HGNC Symbol;Acc:HGNC:28625]
83. ABCD2 ENSGALG00000042554 1607 0.901 - - - 0.901 - - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
84. MRPS30 ENSGALG00000014874 3416 0.9 - - - 0.900 - - - - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
85. ASCC1 ENSGALG00000026019 3583 0.9 - - - 0.900 - - - - - - activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24268]
86. RPL19 ENSGALG00000001658 277294 0.899 - - - - - - 0.899 - - - ribosomal protein L19 [Source:NCBI gene;Acc:420003]
87. TK2 ENSGALG00000034216 5394 0.899 - - - 0.899 - - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
88. MPHOSPH10 ENSGALG00000003906 7029 0.898 - - - 0.898 - - - - - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
89. CYP20A1 ENSGALG00000008730 930 0.897 - - - 0.897 - - - - - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
90. KIAA1462 1612 0.897 - - - 0.897 - - - - - - KIAA1462, transcript variant X4
91. GTF3C4 ENSGALG00000031016 1221 0.896 - - - 0.896 - - - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
92. UTP18 ENSGALG00000002985 7129 0.895 - - - 0.895 - - - - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
93. SUMO1 ENSGALG00000008435 19847 0.894 - - - 0.894 - - - - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
94. SESN1 ENSGALG00000015286 2387 0.892 - - - 0.892 - - - - - - sestrin 1 [Source:HGNC Symbol;Acc:HGNC:21595]
95. RAB33B ENSGALG00000009790 2340 0.892 - - - 0.892 - - - - - - RAB33B, member RAS oncogene family [Source:NCBI gene;Acc:422441]
96. MINA 3053 0.892 - - - 0.892 - - - - - - MYC induced nuclear antigen
97. HMHA1 HMHA1 929 0.892 - - - 0.892 - - - - - -
98. MRPL40 ENSGALG00000001587 20893 0.89 - - - 0.890 - - - - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
99. RBFOX1 ENSGALG00000034325 2133 0.89 - - - 0.890 - - - - - - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
100. PHTF1 ENSGALG00000001845 3276 0.89 - - - 0.890 - - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]

There are 315 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA