Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CBX1

Gene Name Gene ID Reads Annotation
CBX1 ENSGALG00000033926 2436 chromobox 1 [Source:NCBI gene;Acc:374237]











Genes with expression patterns similar to CBX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CBX1 ENSGALG00000033926 2436 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromobox 1 [Source:NCBI gene;Acc:374237]
2. HS1BP3 ENSGALG00000016486 380 1.593 - - - - - - - - 0.827 0.766 HCLS1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24979]
3. ITM2B ENSGALG00000016996 1112 1.562 - - - - - - - - 0.783 0.779 integral membrane protein 2B [Source:NCBI gene;Acc:395969]
4. CKLF ENSGALG00000005254 3365 1.447 - - - - - - - - 0.739 0.708 chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
5. FMR1 ENSGALG00000009177 561 0.927 - - - - - - - - 0.927 - fragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]
6. FGF12 ENSGALG00000036971 2631 0.909 - - - - - - - - 0.909 - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
7. KIAA0232 ENSGALG00000015538 717 0.908 - - - - - - - - 0.908 - KIAA0232 [Source:HGNC Symbol;Acc:HGNC:28992]
8. ERO1LB ERO1LB 2910 0.904 - - - - - - - - 0.904 -
9. SNRK ENSGALG00000039920 174 0.903 - - - - - - - - 0.903 - SNF related kinase [Source:NCBI gene;Acc:420675]
10. RBMS1 ENSGALG00000011132 569 0.903 - - - - - - - - 0.903 - RNA binding motif single stranded interacting protein 1 [Source:NCBI gene;Acc:395880]
11. ENOX2 ENSGALG00000004079 4055 0.893 - - - - - - - - 0.893 - ecto-NOX disulfide-thiol exchanger 2 [Source:NCBI gene;Acc:422142]
12. DNAJB14 ENSGALG00000014026 598 0.892 - - - - - - - - 0.892 - DnaJ heat shock protein family (Hsp40) member B14 [Source:NCBI gene;Acc:426362]
13. SETX ENSGALG00000003661 701 0.889 - - - - - - - - 0.889 - senataxin [Source:HGNC Symbol;Acc:HGNC:445]
14. ELN 765 0.884 - - - - - - - - 0.884 - elastin, transcript variant X24
15. GSTCD ENSGALG00000010573 1409 0.881 - - - - - - - - 0.881 - glutathione S-transferase C-terminal domain containing [Source:HGNC Symbol;Acc:HGNC:25806]
16. SFMBT2 ENSGALG00000009279 125 0.879 - - - - - - - - 0.879 - Scm like with four mbt domains 2 [Source:HGNC Symbol;Acc:HGNC:20256]
17. NCOA2 ENSGALG00000036017 256 0.879 - - - - - - - - 0.879 - nuclear receptor coactivator 2, transcript variant X9
18. IFT27 ENSGALG00000042990 221 0.876 - - - - - - - - 0.876 - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
19. ENSGALG00000021611 ENSGALG00000021611 1551 0.875 - - - - - - - - 0.875 -
20. VPS51 ENSGALG00000004166 204 0.873 - - - - - - - - 0.873 - VPS51, GARP complex subunit [Source:NCBI gene;Acc:422984]
21. NIF3L1 ENSGALG00000008226 1500 0.871 - - - - - - - - 0.871 - NGG1 interacting factor 3 like 1 [Source:HGNC Symbol;Acc:HGNC:13390]
22. BPHL ENSGALG00000029659 501 0.87 - - - - - - - - 0.870 - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
23. RIF1 ENSGALG00000012484 2248 0.866 - - - - - - - - 0.866 - replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
24. MYO3A ENSGALG00000007647 643 0.866 - - - - - - - - 0.866 - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
25. GAPVD1 ENSGALG00000000993 1988 0.864 - - - - - - - - 0.864 - GTPase activating protein and VPS9 domains 1 [Source:NCBI gene;Acc:417095]
26. LACE1 LACE1 74 0.86 - - - - - - - - 0.860 -
27. FILIP1L ENSGALG00000015271 644 0.858 - - - - - - - - 0.858 - filamin A interacting protein 1 like, transcript variant X8
28. CUL1 ENSGALG00000036941 317 0.855 - - - - - - - - 0.855 - cullin 1 [Source:HGNC Symbol;Acc:HGNC:2551]
29. FAM161B ENSGALG00000010196 672 0.854 - - - - - - - - 0.854 - FAM161B, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:19854]
30. SRRD ENSGALG00000005614 234 0.852 - - - - - - - - 0.852 - SRR1 domain containing [Source:NCBI gene;Acc:416908]
31. AIDA ENSGALG00000009426 219 0.851 - - - - - - - - 0.851 - axin interactor, dorsalization associated [Source:NCBI gene;Acc:421335]
32. TFG ENSGALG00000015299 849 0.85 - - - - - - - - 0.850 - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
33. POLR3B ENSGALG00000012655 704 0.849 - - - - - - - - 0.849 - Gallus gallus RNA polymerase III subunit B (POLR3B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321490]
34. HMGXB3 ENSGALG00000005770 119 0.848 - - - - - - - - 0.848 - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
35. RNF207 2949 0.846 - - - - - - - - 0.846 - ring finger protein 207, transcript variant X1
36. NCOA3 ENSGALG00000004570 243 0.846 - - - - - - - - 0.846 - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
37. GALNT14 ENSGALG00000009078 126 0.845 - - - - - - - - 0.845 - polypeptide N-acetylgalactosaminyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:22946]
38. ZNF148 ENSGALG00000012049 365 0.844 - - - - - - - - 0.844 - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
39. APP ENSGALG00000015770 9438 0.843 - - - - - - - - 0.843 - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
40. DUSP22 ENSGALG00000027397 886 0.843 - - - - - - - - 0.843 - dual specificity phosphatase 22 [Source:HGNC Symbol;Acc:HGNC:16077]
41. C14orf79 C14orf79 401 0.84 - - - - - - - - 0.840 -
42. OGDH ENSGALG00000014155 441 0.839 - - - - - - - - 0.839 - oxoglutarate dehydrogenase [Source:NCBI gene;Acc:426429]
43. ASH1L ENSGALG00000014638 803 0.835 - - - - - - - - 0.835 - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
44. MAPK8IP3 ENSGALG00000029514 57 0.834 - - - - - - - - 0.834 - mitogen-activated protein kinase 8 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:6884]
45. C2orf40 ENSGALG00000043690 7790 0.834 - - - - - - - - 0.834 - chromosome 2 open reading frame 40 [Source:HGNC Symbol;Acc:HGNC:24642]
46. ENSGALG00000016701 ENSGALG00000016701 418 0.832 - - - - - - - - 0.832 -
47. INTS1 ENSGALG00000004104 950 0.831 - - - - - - - 0.831 - - integrator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24555]
48. RBM45 ENSGALG00000009202 6057 0.831 - - - - - - - - 0.831 - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
49. G6PC2 ENSGALG00000010899 260 0.83 - - - - - - - - 0.830 - glucose-6-phosphatase catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:28906]
50. PYGL ENSGALG00000012365 4691 0.828 - - - - - - - - 0.828 - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
51. SKIL ENSGALG00000009356 335 0.827 - - - - - - - - 0.827 - SKI like proto-oncogene [Source:NCBI gene;Acc:396087]
52. VPS45 ENSGALG00000013899 154 0.825 - - - - - - - - 0.825 - vacuolar protein sorting 45 homolog [Source:NCBI gene;Acc:430741]
53. ADNP ENSGALG00000007989 1930 0.825 - - - - - - - - 0.825 - activity dependent neuroprotector homeobox [Source:HGNC Symbol;Acc:HGNC:15766]
54. ELMO3 ENSGALG00000030220 375 0.824 - - - - - - - - 0.824 - engulfment and cell motility 3 [Source:NCBI gene;Acc:100857533]
55. SGCE ENSGALG00000009670 3070 0.824 - - - - - - - - 0.824 - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
56. MAP4 36 0.824 - - - - - - - - 0.824 - microtubule associated protein 4, transcript variant X12
57. HCFC2 ENSGALG00000029616 4525 0.823 - - - - - - - - 0.823 - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
58. LHFP 167 0.823 - - - - - - - - 0.823 - lipoma HMGIC fusion partner
59. AMDHD2 ENSGALG00000009234 1730 0.822 - - - - - - - - 0.822 - Gallus gallus amidohydrolase domain containing 2 (AMDHD2), mRNA. [Source:RefSeq mRNA;Acc:NM_001345995]
60. UBXN2A ENSGALG00000016497 2444 0.818 - - - - - - - - 0.818 - UBX domain protein 2A [Source:NCBI gene;Acc:421973]
61. IFT81 ENSGALG00000003854 2534 0.818 - - - - - - - - 0.818 - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
62. VPS13B 2293 0.818 - - - - - - - - 0.818 - vacuolar protein sorting 13 homolog B
63. NEIL1 ENSGALG00000001586 2292 0.818 - - - - - - - - 0.818 - nei like DNA glycosylase 1 [Source:NCBI gene;Acc:770068]
64. GPR180 ENSGALG00000016897 1545 0.817 - - - - - - - - 0.817 - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
65. CDON ENSGALG00000035419 2240 0.817 - - - - - - - - 0.817 - cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17104]
66. GID8 ENSGALG00000005700 3992 0.817 - - - - - - - - 0.817 - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
67. OSBPL11 ENSGALG00000012059 2523 0.817 - - - - - - - - 0.817 - oxysterol binding protein like 11 [Source:HGNC Symbol;Acc:HGNC:16397]
68. SLC41A3 ENSGALG00000034289 1414 0.816 - - - - - - - - 0.816 - solute carrier family 41 member 3 [Source:HGNC Symbol;Acc:HGNC:31046]
69. BFAR ENSGALG00000003111 1778 0.814 - - - - - - - - 0.814 - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
70. VIPAS39 ENSGALG00000010459 2090 0.814 - - - - - - - - 0.814 - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:HGNC Symbol;Acc:HGNC:20347]
71. HAND1 ENSGALG00000035104 2351 0.814 - - - - - - - - 0.814 - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
72. TCP11L2 ENSGALG00000012658 1671 0.813 - - - - - - - - 0.813 - t-complex 11 like 2 [Source:NCBI gene;Acc:425052]
73. ANO1 ENSGALG00000041808 5149 0.81 - - - - - - - - 0.810 - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
74. ANKIB1 ENSGALG00000031917 109 0.81 - - - - - - - - 0.810 - ankyrin repeat and IBR domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22215]
75. ASCC3 ENSGALG00000015465 259 0.809 - - - - - - - - 0.809 - activating signal cointegrator 1 complex subunit 3 [Source:NCBI gene;Acc:421790]
76. HDX ENSGALG00000007041 179 0.807 - - - - - - - - 0.807 - highly divergent homeobox [Source:NCBI gene;Acc:422272]
77. TMEM180 TMEM180 1086 0.806 - - - - - - - - 0.806 -
78. ELP3 ENSGALG00000016624 4483 0.806 - - - - - - - - 0.806 - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
79. LIMS1 ENSGALG00000029970 7244 0.806 - - - - - - - - 0.806 - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
80. RYBP ENSGALG00000033025 3019 0.805 - - - - - - - - 0.805 - RING1 and YY1 binding protein
81. KIAA0408 ENSGALG00000030211 934 0.804 - - - - - - - - 0.804 - KIAA0408 [Source:HGNC Symbol;Acc:HGNC:21636]
82. CSPP1 1756 0.802 - - - - - - - - 0.802 - centrosome and spindle pole associated protein 1
83. RNF152 ENSGALG00000028822 291 0.802 - - - - - - - - 0.802 - ring finger protein 152 [Source:NCBI gene;Acc:420909]
84. TRIT1 ENSGALG00000003851 1518 0.802 - - - - - - - - 0.802 - tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]
85. AGFG1 ENSGALG00000003052 4766 0.802 - - - - - - - - 0.802 - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
86. PAN3 ENSGALG00000017092 5387 0.8 - - - - - - - - 0.800 - poly(A) specific ribonuclease subunit PAN3 [Source:HGNC Symbol;Acc:HGNC:29991]
87. ALDH6A1 ENSGALG00000010211 29 0.799 - - - - - - - - - 0.799 aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
88. MT-ND4L MT-ND4L 12537 0.798 - - - - - - - - 0.798 -
89. CLN6 ENSGALG00000007981 5656 0.798 - - - - - - - - 0.798 - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
90. RAP1A ENSGALG00000001476 5287 0.798 - - - - - - - - 0.798 - RAP1A, member of RAS oncogene family
91. DHRS7B ENSGALG00000004759 2193 0.798 - - - - - - - - 0.798 - dehydrogenase/reductase 7B [Source:HGNC Symbol;Acc:HGNC:24547]
92. OGG1 ENSGALG00000006651 1320 0.797 - - - - - - - - 0.797 - 8-oxoguanine DNA glycosylase [Source:NCBI gene;Acc:771001]
93. PRDM4 ENSGALG00000012619 876 0.797 - - - - - - - - 0.797 - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
94. BMPER ENSGALG00000029811 636 0.797 - - - - - - - - 0.797 - BMP binding endothelial regulator [Source:NCBI gene;Acc:420744]
95. IARS ENSGALG00000004813 12936 0.796 - - - - - - - - 0.796 - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
96. HKDC1 ENSGALG00000021039 134 0.796 - - - - - - - - 0.796 - hexokinase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23302]
97. GID4 ENSGALG00000004929 1949 0.796 - - - - - - - - 0.796 - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
98. CWC22 ENSGALG00000009001 5984 0.796 - - - - - - - - 0.796 - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
99. SPECC1 ENSGALG00000004400 611 0.796 - - - - - - - - 0.796 - sperm antigen with calponin homology and coiled-coil domains 1 [Source:HGNC Symbol;Acc:HGNC:30615]
100. RABL6 ENSGALG00000030263 1127 0.793 - - - - - - - - 0.793 - RAB, member RAS oncogene family like 6 [Source:HGNC Symbol;Acc:HGNC:24703]

There are 194 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA