Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CBS

Gene Name Gene ID Reads Annotation
CBS ENSGALG00000016196 8 cystathionine-beta-synthase, transcript variant X3











Genes with expression patterns similar to CBS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CBS ENSGALG00000016196 8 5 - - 1.000 1.000 - 1.000 - 1.000 - 1.000 cystathionine-beta-synthase, transcript variant X3
2. TRPS1 ENSGALG00000031700 39 1.745 - - - - - - - 0.850 - 0.895 transcriptional repressor GATA binding 1 [Source:HGNC Symbol;Acc:HGNC:12340]
3. SYNRG ENSGALG00000005468 27 1.693 - - - - - - - 0.894 - 0.799 synergin gamma [Source:HGNC Symbol;Acc:HGNC:557]
4. VLDL VLDL 13 1.432 - - 0.729 - - - - - - 0.703
5. SNORA29 SNORA29 8 1 - - - 1.000 - - - - - -
6. SIK2 ENSGALG00000036873 7 1 - - - - - - - - - 1.000 salt inducible kinase 2 [Source:HGNC Symbol;Acc:HGNC:21680]
7. ENSGALG00000024484 ENSGALG00000024484 3 1 - - 1.000 - - - - - - -
8. PPP4R1L 15 1 - - - - - - - - - 1.000 protein phosphatase 4, regulatory subunit 1-like, transcript variant X2
9. FGL2 ENSGALG00000008306 15 1 - - - - - - - - - 1.000 fibrinogen like 2 [Source:NCBI gene;Acc:768821]
10. TDRD12 ENSGALG00000004704 19 1 - - - 1.000 - - - - - - tudor domain containing 12, transcript variant X3
11. CYP2AC1 ENSGALG00000016690 1 1 - - 1.000 - - - - - - - Gallus gallus cytochrome P450, family 2, subfamily AC, polypeptide 1 (CYP2AC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001329498]
12. GALNTL6 ENSGALG00000030588 3 1 - - - - - - - - - 1.000 polypeptide N-acetylgalactosaminyltransferase-like 6
13. NEK10 ENSGALG00000040569 1 1 - - - - - - - - - 1.000 NIMA related kinase 10 [Source:HGNC Symbol;Acc:HGNC:18592]
14. TH ENSGALG00000029648 2 1 - - - - - - - - - 1.000 tyrosine hydroxylase [Source:NCBI gene;Acc:395592]
15. AK4 ENSGALG00000011035 9 1 - - 1.000 - - - - - - - adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
16. ENSGALG00000028322 ENSGALG00000028322 19 1 - - - - - - - - - 1.000
17. EPB41L5 ENSGALG00000011605 18 1 - - - - - - - - - 1.000 erythrocyte membrane protein band 4.1 like 5 [Source:HGNC Symbol;Acc:HGNC:19819]
18. CPO ENSGALG00000008516 3 1 - - - - - - - - - 1.000 carboxypeptidase O [Source:HGNC Symbol;Acc:HGNC:21011]
19. ENSGALG00000027169 ENSGALG00000027169 2 1 - - - - - - - - - 1.000
20. ENSGALG00000019711 ENSGALG00000019711 4 1 - - - - - - - - - 1.000
21. LECT2 ENSGALG00000006323 60 1 - - 1.000 - - - - - - - leukocyte cell derived chemotaxin 2 [Source:NCBI gene;Acc:396471]
22. PROZ ENSGALG00000016832 6 1 - - 1.000 - - - - - - - protein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]
23. P2RX3 ENSGALG00000040479 5 1 - - - - - - - - - 1.000 Gallus gallus purinergic receptor P2X 3 (P2RX3), mRNA. [Source:RefSeq mRNA;Acc:NM_001329216]
24. ENSGALG00000019864 ENSGALG00000019864 4 1 - - 1.000 - - - - - - -
25. CHRM4 ENSGALG00000008365 1 1 - - - - - - - - - 1.000 Gallus gallus cholinergic receptor muscarinic 4 (CHRM4), mRNA. [Source:RefSeq mRNA;Acc:NM_001031191]
26. DCSTAMP ENSGALG00000033520 1 1 - - 1.000 - - - - - - - dendrocyte expressed seven transmembrane protein [Source:HGNC Symbol;Acc:HGNC:18549]
27. DOCK3 ENSGALG00000002335 5 1 - - 1.000 - - - - - - - dedicator of cytokinesis 3 [Source:HGNC Symbol;Acc:HGNC:2989]
28. LRFN2 ENSGALG00000010050 28 1 - - 1.000 - - - - - - - leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21226]
29. ENSGALG00000012928 ENSGALG00000012928 2 1 - - - - - - - - - 1.000
30. MYH1G ENSGALG00000028612 7 1 - - - 1.000 - - - - - - Gallus gallus myosin, heavy chain 1G, skeletal muscle (MYH1G), mRNA. [Source:RefSeq mRNA;Acc:NM_001319016]
31. ENSGALG00000006152 ENSGALG00000006152 2 1 - - - - - - - - - 1.000
32. HFM1 ENSGALG00000006091 5 1 - - - - - - - - - 1.000 HFM1, ATP dependent DNA helicase homolog [Source:HGNC Symbol;Acc:HGNC:20193]
33. IL5RA ENSGALG00000008267 7 1 - - - - - - - - - 1.000 interleukin 5 receptor subunit alpha [Source:NCBI gene;Acc:771801]
34. EEF1AKMT4 ENSGALG00000026332 1 1 - - - - - - - - - 1.000 EEF1A lysine methyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:53611]
35. ENSGALG00000024315 ENSGALG00000024315 1 1 - - 1.000 - - - - - - -
36. FLI1 ENSGALG00000001161 2 1 - - - - - - - - - 1.000 Fli-1 proto-oncogene, ETS transcription factor [Source:NCBI gene;Acc:419723]
37. SERHL2 ENSGALG00000011867 2 1 - - - - - - - - - 1.000 serine hydrolase like 2 [Source:NCBI gene;Acc:417976]
38. SLC6A5 ENSGALG00000003908 3 1 - - - 1.000 - - - - - - solute carrier family 6 member 5 [Source:HGNC Symbol;Acc:HGNC:11051]
39. GAL10 GAL10 33355 0.986 - - 0.986 - - - - - - -
40. CASR ENSGALG00000038405 53 0.983 - - - - - - - 0.983 - - calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
41. TFPI2 ENSGALG00000009512 84 0.975 - - - - - - - - - 0.975 tissue factor pathway inhibitor 2 [Source:HGNC Symbol;Acc:HGNC:11761]
42. GABARAPL3 GABARAPL3 32 0.974 - - - - - - - 0.974 - -
43. ENSGALG00000005543 ENSGALG00000005543 2 0.974 - - - - - - - 0.974 - -
44. MGMT ENSGALG00000042949 53 0.974 - - - - - - - 0.974 - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
45. ENSGALG00000005511 ENSGALG00000005511 7 0.974 - - - - - - - 0.974 - -
46. ATP7B ENSGALG00000017021 7 0.974 - - - - - - - 0.974 - - ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
47. ENSGALG00000022857 ENSGALG00000022857 4 0.974 - - - - - - - 0.974 - -
48. CCDC152 CCDC152 28 0.974 - - - - - - - 0.974 - -
49. NKD1 ENSGALG00000003767 76 0.974 - - - - - - - 0.974 - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
50. UNC45A ENSGALG00000029714 158 0.974 - - - - - - - 0.974 - - unc-45 myosin chaperone A [Source:HGNC Symbol;Acc:HGNC:30594]
51. SPP1 ENSGALG00000010926 8 0.974 - - - - - - - 0.974 - - secreted phosphoprotein 1 [Source:NCBI gene;Acc:395210]
52. BRSK2 ENSGALG00000006681 158 0.974 - - - - - - - 0.974 - - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
53. YAE1D1 23 0.974 - - - - - - - 0.974 - - Yae1 domain containing 1, transcript variant X2
54. EIF4ENIF1 ENSGALG00000006898 24 0.972 - - - - - - - 0.972 - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:HGNC:16687]
55. SLC25A29 ENSGALG00000011220 17 0.972 - - - - - - - 0.972 - - solute carrier family 25 member 29 [Source:HGNC Symbol;Acc:HGNC:20116]
56. TRIM2 ENSGALG00000009207 44 0.97 - - - - - - - 0.970 - - tripartite motif containing 2 [Source:NCBI gene;Acc:100857562]
57. KIRREL3 ENSGALG00000029197 5 0.968 - - - - - - - - - 0.968 kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
58. CX3CL1 ENSGALG00000026663 218 0.965 - - - - - - - 0.965 - - C-X3-C motif chemokine ligand 1 [Source:NCBI gene;Acc:415651]
59. NMRK1 ENSGALG00000015156 88 0.962 - - - - - - - 0.962 - - nicotinamide riboside kinase 1 [Source:HGNC Symbol;Acc:HGNC:26057]
60. ELOVL2 ENSGALG00000012748 97 0.961 - - - - - - - 0.961 - - ELOVL fatty acid elongase 2 [Source:NCBI gene;Acc:420858]
61. CXorf30 CXorf30 172 0.961 - - - - - - - 0.961 - -
62. ENSGALG00000011516 ENSGALG00000011516 24 0.961 - - - - - - - 0.961 - -
63. CLMN ENSGALG00000030719 60 0.959 - - - - - - - 0.959 - - calmin [Source:HGNC Symbol;Acc:HGNC:19972]
64. FAM122B ENSGALG00000006108 16 0.955 - - - - - - - 0.955 - - family with sequence similarity 122B [Source:HGNC Symbol;Acc:HGNC:30490]
65. HPS3 ENSGALG00000040089 44 0.952 - - - - - - - 0.952 - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
66. LHX2 ENSGALG00000001124 18 0.95 - - - - - - - 0.950 - - LIM homeobox 2 [Source:NCBI gene;Acc:395705]
67. TNFRSF19 ENSGALG00000017119 25 0.948 - - - - - - - 0.948 - - TNF receptor superfamily member 19 [Source:NCBI gene;Acc:418943]
68. SLC6A11 ENSGALG00000004879 16 0.947 - - - - - - - - - 0.947 solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
69. SNORD97 SNORD97 4 0.947 - - - - - - - - - 0.947
70. SCN3B ENSGALG00000006490 48 0.942 - - - - - - - 0.942 - - sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]
71. ABRA ENSGALG00000041043 16 0.934 - - - - - - - 0.934 - - actin binding Rho activating protein [Source:HGNC Symbol;Acc:HGNC:30655]
72. PCLO 249 0.929 - - - - - - - 0.929 - - piccolo presynaptic cytomatrix protein
73. OPRL1 ENSGALG00000027965 53 0.929 - - - 0.929 - - - - - - Gallus gallus opioid related nociceptin receptor 1 (OPRL1), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318978]
74. TNNT2 ENSGALG00000000302 568 0.928 - - - - - 0.928 - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
75. NUDT5 ENSGALG00000013967 145 0.928 - - 0.928 - - - - - - - nudix hydrolase 5 [Source:NCBI gene;Acc:426368]
76. LRRC52 ENSGALG00000003443 20 0.926 - - - - - - - 0.926 - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
77. CD109 ENSGALG00000015910 11 0.921 - - - 0.921 - - - - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
78. COBLL1 ENSGALG00000011068 111 0.919 - - - - - - - 0.919 - - cordon-bleu WH2 repeat protein like 1 [Source:HGNC Symbol;Acc:HGNC:23571]
79. TRAF6 ENSGALG00000007932 12 0.916 - - - 0.916 - - - - - - TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
80. PPP2R5E ENSGALG00000011840 176 0.916 - - - - - - - 0.916 - - protein phosphatase 2 regulatory subunit B'epsilon [Source:HGNC Symbol;Acc:HGNC:9313]
81. SLC39A12 ENSGALG00000008602 6 0.915 - - - - - - - - - 0.915 solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
82. CCDC73 ENSGALG00000012103 17 0.915 - - - - - - - - - 0.915 coiled-coil domain containing 73 [Source:HGNC Symbol;Acc:HGNC:23261]
83. RAP2A ENSGALG00000016889 26 0.914 - - - 0.914 - - - - - - RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
84. CDX1 ENSGALG00000005679 461 0.911 - - - - - - - - - 0.911 caudal type homeobox 1 [Source:NCBI gene;Acc:395397]
85. PRRG4 ENSGALG00000012032 96 0.907 - - 0.907 - - - - - - - proline rich and Gla domain 4 [Source:NCBI gene;Acc:421600]
86. ZNF488 ENSGALG00000005975 82 0.905 - - - - - 0.905 - - - - zinc finger protein 488, transcript variant X2
87. PARD6B ENSGALG00000007994 15 0.903 - - - 0.903 - - - - - - par-6 family cell polarity regulator beta [Source:NCBI gene;Acc:419352]
88. SCML4 ENSGALG00000015309 499 0.901 - - - 0.901 - - - - - - Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
89. SLC29A4 ENSGALG00000010497 43 0.9 - - - - - - - 0.900 - - solute carrier family 29 member 4 [Source:HGNC Symbol;Acc:HGNC:23097]
90. PIK3R2 ENSGALG00000003428 205 0.9 - - - - - - - 0.900 - - phosphoinositide-3-kinase regulatory subunit 2
91. TMEM198 ENSGALG00000018803 17 0.898 - - 0.898 - - - - - - - transmembrane protein 198 [Source:HGNC Symbol;Acc:HGNC:33704]
92. C12orf29 ENSGALG00000011168 26 0.897 - - - 0.897 - - - - - - chromosome 12 open reading frame 29 [Source:HGNC Symbol;Acc:HGNC:25322]
93. TMEM259 ENSGALG00000002029 8 0.895 - - 0.895 - - - - - - - transmembrane protein 259 [Source:HGNC Symbol;Acc:HGNC:17039]
94. IRF8 ENSGALG00000005757 5 0.895 - - 0.895 - - - - - - - interferon regulatory factor 8 [Source:NCBI gene;Acc:396385]
95. NTNG2 ENSGALG00000003677 73 0.894 - - - - - - - - - 0.894 netrin G2 [Source:HGNC Symbol;Acc:HGNC:14288]
96. SAMD15 ENSGALG00000010457 69 0.894 - - - - - - - 0.894 - - sterile alpha motif domain containing 15
97. GAB3 ENSGALG00000008408 19 0.891 - - - - - - - - - 0.891 GRB2 associated binding protein 3 [Source:HGNC Symbol;Acc:HGNC:17515]
98. CPXM2 ENSGALG00000009693 23 0.887 - - - - - - - - - 0.887 carboxypeptidase X, M14 family member 2 [Source:HGNC Symbol;Acc:HGNC:26977]
99. gga-mir-20b gga-mir-20b 7 0.887 - - - - - - - - - 0.887
100. FHIT ENSGALG00000007172 580 0.885 - - - - - 0.885 - - - - fragile histidine triad [Source:NCBI gene;Acc:416071]

There are 161 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA