Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CAST

Gene Name Gene ID Reads Annotation
CAST ENSGALG00000014682 900 calpastatin [Source:NCBI gene;Acc:427121]











Genes with expression patterns similar to CAST

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CAST ENSGALG00000014682 900 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calpastatin [Source:NCBI gene;Acc:427121]
2. MAP3K8 ENSGALG00000007356 188 1.564 - - 0.717 - - - - - - 0.847 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
3. CDC2L1 CDC2L1 894 1.478 - - - - - - - - 0.715 0.763
4. KDM6A ENSGALG00000016217 2302 1.45 - - - - - - - - 0.747 0.703 lysine demethylase 6A, transcript variant X14
5. CLDN12 ENSGALG00000009038 16 1.447 - - - 0.728 0.719 - - - - - claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
6. PRICKLE1 ENSGALG00000009556 60 0.888 - - - - - - - - - 0.888 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
7. AGPAT6 AGPAT6 2564 0.888 - - - - - - - - - 0.888
8. TRIM3 ENSGALG00000034004 110 0.884 - - - - - - - - - 0.884 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
9. EDEM2 ENSGALG00000003128 3338 0.884 - - - - - - - - - 0.884 ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
10. CCBL2 CCBL2 184 0.883 - - - - - - - - - 0.883
11. MRPS5 ENSGALG00000008550 1707 0.881 - - - - - - - - - 0.881 mitochondrial ribosomal protein S5 [Source:NCBI gene;Acc:416706]
12. RASSF8 ENSGALG00000014041 850 0.88 - - - - - - - - - 0.880 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
13. ENSGALG00000001919 ENSGALG00000001919 531 0.878 - - - - - - - - - 0.878
14. PIGW ENSGALG00000023554 951 0.876 - - - - - - - - - 0.876 phosphatidylinositol glycan anchor biosynthesis class W [Source:HGNC Symbol;Acc:HGNC:23213]
15. PON2 ENSGALG00000009689 1416 0.872 - - - - - - - - - 0.872 paraoxonase 2 [Source:NCBI gene;Acc:395830]
16. NBN ENSGALG00000037686 648 0.871 - - - - - - - - - 0.871 nibrin [Source:NCBI gene;Acc:374246]
17. COQ6 ENSGALG00000010197 3283 0.869 - - - - - - - - - 0.869 coenzyme Q6, monooxygenase [Source:HGNC Symbol;Acc:HGNC:20233]
18. SLC38A1 ENSGALG00000009698 566 0.867 - - - - - - - - - 0.867 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
19. ARCN1 ENSGALG00000007430 21499 0.865 - - - - - - - - - 0.865 archain 1 [Source:NCBI gene;Acc:770561]
20. ATP2B2 ENSGALG00000030908 584 0.86 - - - - - - - - - 0.860 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
21. NHLRC2 ENSGALG00000008946 387 0.859 - - - - - - - - - 0.859 NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
22. ACOX1 ENSGALG00000002159 2953 0.855 - - - - - - - - - 0.855 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
23. RPGR ENSGALG00000036284 186 0.854 - - - - - - - - - 0.854 retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]
24. AGMO ENSGALG00000010792 76 0.853 - - - - - - - - - 0.853 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
25. PDCD7 ENSGALG00000021027 3807 0.853 - - - - - - - - - 0.853 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
26. SIPA1L2 ENSGALG00000037506 3651 0.853 - - - - - - - - - 0.853 signal induced proliferation associated 1 like 2 [Source:HGNC Symbol;Acc:HGNC:23800]
27. CTCF 10811 0.852 - - - - - - - - - 0.852 CCCTC-binding factor, transcript variant X2
28. RAB34 ENSGALG00000026315 1193 0.852 - - - - - - - - - 0.852 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
29. U2SURP ENSGALG00000002612 4255 0.852 - - - - - - - - - 0.852 U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
30. C28H19ORF10 C28H19ORF10 16529 0.852 - - - - - - - - - 0.852
31. SOS2 ENSGALG00000012273 41 0.851 - - - - - - - - - 0.851 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
32. TM6SF2 ENSGALG00000029015 109 0.851 - - - - - - - - - 0.851 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
33. CNKSR3 ENSGALG00000027159 41 0.85 - - - - - - - - - 0.850 CNKSR family member 3, transcript variant X2
34. UBE3C ENSGALG00000006461 57 0.85 - - - - - - - - - 0.850 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
35. ENSGALG00000004772 ENSGALG00000004772 173 0.85 - - - - - - - - - 0.850
36. ENSGALG00000008594 ENSGALG00000008594 54 0.849 - - - - - - - - - 0.849
37. MAP3K3 ENSGALG00000000525 115 0.849 - - - - - - - - - 0.849 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
38. TFG ENSGALG00000015299 849 0.847 - - - - - - - - - 0.847 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
39. TRIM24 ENSGALG00000012823 2725 0.845 - - - - - - - - - 0.845 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
40. TRIP4 ENSGALG00000030672 1255 0.845 - - - - - - - - - 0.845 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
41. PROCR ENSGALG00000006547 645 0.845 - - - - - - - - - 0.845 protein C receptor [Source:NCBI gene;Acc:424867]
42. BCOR ENSGALG00000016245 85 0.845 - - - - - - - - - 0.845 BCL6 corepressor, transcript variant X8
43. HEATR5A 1233 0.844 - - - - - - - - - 0.844 HEAT repeat containing 5A, transcript variant X7
44. PTPRE ENSGALG00000009823 250 0.844 - - - - - - - - - 0.844 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
45. AHSA2 1504 0.843 - - - - - - - - - 0.843 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
46. ADAMTS12 55 0.843 - - - - - - - - - 0.843 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
47. STAU1 ENSGALG00000004736 3828 0.842 - - - - - - - - - 0.842 staufen double-stranded RNA binding protein 1 [Source:NCBI gene;Acc:419213]
48. SUPV3L1 ENSGALG00000004197 4141 0.842 - - - - - - - - - 0.842 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
49. DNAJC24 ENSGALG00000012130 1882 0.842 - - - - - - - - - 0.842 DnaJ heat shock protein family (Hsp40) member C24 [Source:NCBI gene;Acc:421603]
50. GRPEL2 ENSGALG00000002673 105 0.842 - - - - - - - - - 0.842 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
51. TTI1 ENSGALG00000006791 1218 0.842 - - - - - - - - - 0.842 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
52. ENSGALG00000027621 ENSGALG00000027621 863 0.841 - - - - - - - - - 0.841
53. SERPINB6 ENSGALG00000012866 1582 0.841 - - - - - - - - - 0.841 serpin family B member 6 [Source:NCBI gene;Acc:420895]
54. GPR114 GPR114 46 0.84 - - - - - - - - - 0.840
55. ENSGALG00000018358 ENSGALG00000018358 101 0.839 - - - - - - - - - 0.839
56. TMEM199 ENSGALG00000023757 10781 0.839 - - - - - - - - - 0.839 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
57. VAV2 ENSGALG00000002699 503 0.838 - - - - - - - - - 0.838 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
58. EEA1 ENSGALG00000011280 923 0.838 - - - - - - - - - 0.838 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
59. CHTF8 ENSGALG00000000632 7230 0.838 - - - - - - - - - 0.838 chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
60. PKDCCB ENSGALG00000011166 74 0.836 - - - - - - - - - 0.836 protein kinase domain containing, cytoplasmic b
61. TNFRSF21 ENSGALG00000016719 2762 0.836 - - - - - - - - - 0.836 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
62. NMD3 ENSGALG00000009533 8726 0.836 - - - - - - - - - 0.836 NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
63. TGFB3 ENSGALG00000010346 3118 0.836 - - - - - - - - - 0.836 transforming growth factor beta 3 [Source:NCBI gene;Acc:396438]
64. ZNF142 ENSGALG00000011393 2078 0.836 - - - - - - - - - 0.836 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
65. ZFPM2 ENSGALG00000040079 942 0.835 - - - - - - - - - 0.835 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
66. TYSND1 ENSGALG00000033807 716 0.834 - - - - - - - - - 0.834 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
67. NFKBIE ENSGALG00000044525 633 0.834 - - - - - - - - - 0.834 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
68. DTX2 ENSGALG00000001905 1475 0.834 - - - - - - - - - 0.834 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
69. MDN1 ENSGALG00000015733 2352 0.833 - - - - - - - - - 0.833 midasin AAA ATPase 1, transcript variant X1
70. KIF25 ENSGALG00000011299 2601 0.833 - - - - - - - - - 0.833 kinesin family member 25 [Source:HGNC Symbol;Acc:HGNC:6390]
71. USP36 ENSGALG00000037018 783 0.832 - - - - - - - - - 0.832 ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
72. PMVK ENSGALG00000046656 645 0.832 - - - - - - - - - 0.832 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
73. STX6 3297 0.832 - - - - - - - - - 0.832 syntaxin 6
74. CTK-1 CTK-1 1618 0.832 - - - - - - - - - 0.832
75. RGP1 ENSGALG00000002394 5937 0.832 - - - - - - - - - 0.832 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
76. ENTHD2 684 0.832 - - - - - - - - - 0.832 ENTH domain containing 2, transcript variant X1
77. RAB11FIP2 ENSGALG00000009304 913 0.832 - - - - - - - - - 0.832 RAB11 family interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29152]
78. EP3 EP3 741 0.831 - - - - - - - - - 0.831
79. ANGEL1 ENSGALG00000010372 1763 0.83 - - - - - - - - - 0.830 angel homolog 1 [Source:NCBI gene;Acc:423370]
80. C5orf24 ENSGALG00000006371 1573 0.829 - - - - - - - - - 0.829 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
81. FN3K ENSGALG00000001531 208 0.829 - - - - - - - - - 0.829 fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
82. RP9 ENSGALG00000035453 1186 0.827 - - - - - - - - - 0.827 retinitis pigmentosa 9 (autosomal dominant)
83. MITF ENSGALG00000039583 865 0.826 - - - - - - - - - 0.826 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
84. CKI CKI 2845 0.826 - - - - - - - - - 0.826
85. SNIP1 ENSGALG00000002010 1429 0.824 - - - - - - - - - 0.824 Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
86. NET1 ENSGALG00000008437 9850 0.823 - - - - - - - - - 0.823 neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
87. FOXP1 127 0.823 - - - - - - - - - 0.823 forkhead box P1, transcript variant X14
88. CEPT1 ENSGALG00000000142 4219 0.823 - - - - - - - - - 0.823 choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
89. PDCD4 ENSGALG00000008700 574 0.823 - - - - - - - - - 0.823 programmed cell death 4 [Source:NCBI gene;Acc:374191]
90. DUSP23 1663 0.822 - - - - - - - - - 0.822 dual specificity phosphatase 23, transcript variant X1
91. ARIH2 ENSGALG00000006956 3692 0.821 - - - - - - - - - 0.821 ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:416061]
92. ENSGALG00000004643 ENSGALG00000004643 2297 0.821 - - - - - - - - - 0.821
93. PURH PURH 28410 0.821 - - - - - - - - - 0.821
94. CENPJ ENSGALG00000017148 1415 0.821 - - - - - - - - - 0.821 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
95. ENSGALG00000028359 ENSGALG00000028359 479 0.818 - - - - - - - - - 0.818
96. CEP57 ENSGALG00000017201 524 0.818 - - - - - - - - - 0.818 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
97. SHPK ENSGALG00000004637 2386 0.817 - - - - - - - - - 0.817 sedoheptulokinase, transcript variant X1
98. AP3B2 2331 0.815 - - - - - - - - - 0.815 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
99. HDAC4 ENSGALG00000004288 2124 0.815 - - - - - - - - - 0.815 histone deacetylase 4 [Source:NCBI gene;Acc:374207]
100. USP14 ENSGALG00000014920 18778 0.814 - - - - - - - - - 0.814 ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]

There are 278 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA