Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CASS4

Gene Name Gene ID Reads Annotation
CASS4 ENSGALG00000007744 10 Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]











Genes with expression patterns similar to CASS4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CASS4 ENSGALG00000007744 10 5 - - 1.000 1.000 - 1.000 1.000 - - 1.000 Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]
2. LRRC9 2 1.822 - - 0.822 - - 1.000 - - - - leucine rich repeat containing 9
3. CCDC178 6 1.822 - - 0.822 - - 1.000 - - - - coiled-coil domain containing 178, transcript variant X3
4. PSEN2 ENSGALG00000009073 7 1.764 - - 0.764 - - 1.000 - - - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
5. STX19 ENSGALG00000015413 28 1.579 - - - 0.734 - - 0.845 - - - syntaxin 19 [Source:HGNC Symbol;Acc:HGNC:19300]
6. AMOTL1 ENSGALG00000017208 5 1.578 - - 0.822 0.756 - - - - - - angiomotin like 1 [Source:HGNC Symbol;Acc:HGNC:17811]
7. C3AR1 ENSGALG00000013218 32 1.506 - - 0.756 - - - 0.750 - - - complement C3a receptor 1 [Source:NCBI gene;Acc:418198]
8. TEX33 ENSGALG00000012490 11 1 - - - - - 1.000 - - - - testis expressed 33, transcript variant X2
9. CCDC28A ENSGALG00000013834 8 1 - - - - - 1.000 - - - - coiled-coil domain containing 28A [Source:HGNC Symbol;Acc:HGNC:21098]
10. RAB43 ENSGALG00000005021 5 1 - - - - - 1.000 - - - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
11. GDPGP1 ENSGALG00000045045 2 1 - - - - - 1.000 - - - - GDP-D-glucose phosphorylase 1
12. NADSYN1 ENSGALG00000004153 8 1 - - - - - 1.000 - - - - NAD synthetase 1 [Source:NCBI gene;Acc:422983]
13. MFHAS1 ENSGALG00000011444 7 1 - - - - - 1.000 - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
14. ASPR ASPR 1 1 - - - - - 1.000 - - - -
15. SNX19 ENSGALG00000001425 2 1 - - - - - 1.000 - - - - sorting nexin 19 [Source:HGNC Symbol;Acc:HGNC:21532]
16. MMP9 ENSGALG00000006992 78 1 - - - - - 1.000 - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
17. ENSGALG00000028377 ENSGALG00000028377 4 1 - - 1.000 - - - - - - -
18. FAT2 ENSGALG00000004320 4 1 - - - - - 1.000 - - - - FAT atypical cadherin 2 [Source:HGNC Symbol;Acc:HGNC:3596]
19. CHAT ENSGALG00000002289 26 1 - - - - - 1.000 - - - - choline O-acetyltransferase [Source:NCBI gene;Acc:395314]
20. NFATC3 ENSGALG00000003396 40 1 - - - - - 1.000 - - - - nuclear factor of activated T cells 3 [Source:HGNC Symbol;Acc:HGNC:7777]
21. ENSGALG00000009485 ENSGALG00000009485 4 1 - - - - - 1.000 - - - -
22. QSOX1 ENSGALG00000003933 184 1 - - - - - 1.000 - - - - quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
23. ENSGALG00000021106 ENSGALG00000021106 35 1 - - - - - 1.000 - - - -
24. RNFT2 ENSGALG00000008217 0 1 - - - - - 1.000 - - - - ring finger protein, transmembrane 2 [Source:HGNC Symbol;Acc:HGNC:25905]
25. ENSGALG00000023638 ENSGALG00000023638 16 1 - - - - - 1.000 - - - -
26. CNNM1 ENSGALG00000007489 43 1 - - - - - 1.000 - - - - cyclin and CBS domain divalent metal cation transport mediator 1 [Source:HGNC Symbol;Acc:HGNC:102]
27. IAPP ENSGALG00000013168 1 1 - - - - - 1.000 - - - - islet amyloid polypeptide [Source:NCBI gene;Acc:396362]
28. ONECUT3 ENSGALG00000028081 1 1 - - - - - 1.000 - - - - one cut homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13399]
29. CLDN16 ENSGALG00000025821 14 1 - - - - - 1.000 - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
30. NGB ENSGALG00000010413 0 1 - - - - - 1.000 - - - - neuroglobin [Source:NCBI gene;Acc:428896]
31. FNIP1 ENSGALG00000017462 4 1 - - - - - 1.000 - - - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
32. gga-mir-219b ENSGALG00000018278 1 1 - - - - - 1.000 - - - - gga-mir-219b [Source:miRBase;Acc:MI0015382]
33. ALK 2 1 - - - - - 1.000 - - - - anaplastic lymphoma receptor tyrosine kinase, transcript variant X3
34. THBD ENSGALG00000044442 6 1 - - - - - 1.000 - - - - thrombomodulin
35. GRM5 ENSGALG00000017238 2 1 - - - - - 1.000 - - - - glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:373933]
36. STAM2 ENSGALG00000012513 9 1 - - - - - 1.000 - - - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
37. CASZ1 ENSGALG00000002888 2 1 - - - - - 1.000 - - - - castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
38. TLL2 ENSGALG00000005519 10 1 - - - - - 1.000 - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
39. NRG3 ENSGALG00000042812 10 1 - - - - - 1.000 - - - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
40. GZMA ENSGALG00000013548 22 1 - - - - - 1.000 - - - - granzyme A [Source:NCBI gene;Acc:395108]
41. TMC5 ENSGALG00000006911 12 1 - - 1.000 - - - - - - - transmembrane channel like 5 [Source:HGNC Symbol;Acc:HGNC:22999]
42. 5S 5S 0 1 - - - - - 1.000 - - - -
43. C12orf50 ENSGALG00000045093 9 1 - - - - - 1.000 - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
44. CA12 ENSGALG00000003456 62 1 - - - - - 1.000 - - - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
45. INTS3 8 1 - - - - - 1.000 - - - - integrator complex subunit 3, transcript variant X2
46. CD5 ENSGALG00000031735 3 1 - - - - - 1.000 - - - - CD5 molecule [Source:NCBI gene;Acc:395757]
47. DAPK1 ENSGALG00000012608 17 1 - - - - - 1.000 - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
48. FAM46C 13 1 - - - - - 1.000 - - - - family with sequence similarity 46 member C
49. LOC422320 ENSGALG00000007703 6 1 - - - - - 1.000 - - - - ligand of Numb protein X 2-like, transcript variant X1
50. APBB1 ENSGALG00000046164 5 1 - - - - - 1.000 - - - - amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]
51. ENSGALG00000028367 ENSGALG00000028367 102 1 - - 1.000 - - - - - - -
52. TRPM1 ENSGALG00000003849 5 1 - - - - - 1.000 - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
53. PITPNA ENSGALG00000023806, ENSGALG00000035005 8 1 - - - - - 1.000 - - - - phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
54. FAM194B FAM194B 1 1 - - - - - 1.000 - - - -
55. NT5DC3 ENSGALG00000029746 1 1 - - - - - 1.000 - - - - 5'-nucleotidase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30826]
56. WDR37 ENSGALG00000006749 44 1 - - - - - 1.000 - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
57. HABP2 ENSGALG00000008905 1 1 - - - - - 1.000 - - - - hyaluronan binding protein 2 [Source:NCBI gene;Acc:423898]
58. ENSGALG00000013992 ENSGALG00000013992 6 1 - - - - - 1.000 - - - -
59. IL17RA ENSGALG00000033887 0 1 - - - - - 1.000 - - - - Gallus gallus interleukin 17 receptor A (IL17RA), mRNA. [Source:RefSeq mRNA;Acc:NM_001318988]
60. ENSGALG00000028833 ENSGALG00000028833 0 1 - - - - - 1.000 - - - -
61. PASD1 ENSGALG00000009063 0 1 - - - - - 1.000 - - - - PAS domain containing repressor 1, transcript variant X4
62. HIAT1 HIAT1 447 1 - - - - - 1.000 - - - -
63. SNORD61 SNORD61 12 1 - - - - - 1.000 - - - -
64. TMEM161B ENSGALG00000010896 36 1 - - - - - 1.000 - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
65. LOC422308 ENSGALG00000007546 7 1 - - - - - - 1.000 - - - exocyst complex component 1-like
66. VPS9D1 ENSGALG00000023468 1 1 - - - - - 1.000 - - - - VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
67. TMEM132D ENSGALG00000002671 12 1 - - - - - 1.000 - - - - transmembrane protein 132D, transcript variant X6
68. CRCBL ENSGALG00000025881 3 1 - - - - - 1.000 - - - - cytokine receptor common subunit beta-like, transcript variant X3
69. SLC25A42 ENSGALG00000002621 6 0.977 - - - - - 0.977 - - - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
70. RIMBP2 ENSGALG00000002579 10 0.961 - - 0.961 - - - - - - - RIMS binding protein 2 [Source:NCBI gene;Acc:374105]
71. CCDC96 9 0.938 - - - - - 0.938 - - - - coiled-coil domain containing 96
72. LNP1 ENSGALG00000015287 14 0.938 - - - - - 0.938 - - - - leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:HGNC:28014]
73. ENTPD5 ENSGALG00000010202 69 0.938 - - - - - 0.938 - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
74. MICALL2 ENSGALG00000004070 23 0.938 - - - - - 0.938 - - - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
75. MYL3 ENSGALG00000005448 3379 0.929 - - - - - 0.929 - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
76. TMEM114 ENSGALG00000039005 13 0.921 - - - - - 0.921 - - - - transmembrane protein 114 [Source:HGNC Symbol;Acc:HGNC:33227]
77. ENSGALG00000006740 ENSGALG00000006740 30 0.898 - - 0.898 - - - - - - -
78. TNFRSF18 ENSGALG00000001882 12 0.892 - - - - - 0.892 - - - - TNF receptor superfamily member 18 [Source:NCBI gene;Acc:419424]
79. PELI2 ENSGALG00000012124 7 0.892 - - - - - 0.892 - - - - pellino E3 ubiquitin protein ligase family member 2 [Source:HGNC Symbol;Acc:HGNC:8828]
80. ST8SIA1 ENSGALG00000013211 14 0.888 - - 0.888 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
81. TAL2 ENSGALG00000023114 17 0.882 - - - - - 0.882 - - - - TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]
82. PDE1A ENSGALG00000008885 4 0.88 - - - 0.880 - - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
83. PIK3R3 ENSGALG00000010335 374 0.877 - - - - - 0.877 - - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
84. ENSGALG00000020303 ENSGALG00000020303 5 0.863 - - 0.863 - - - - - - -
85. PTH1R ENSGALG00000005476 15 0.86 - - - - - 0.860 - - - - parathyroid hormone 1 receptor [Source:NCBI gene;Acc:420401]
86. MFSD2B ENSGALG00000016498 208 0.856 - - - - - 0.856 - - - - major facilitator superfamily domain containing 2B [Source:HGNC Symbol;Acc:HGNC:37207]
87. CCDC37 CCDC37 7 0.85 - - - - - 0.850 - - - -
88. MTPN ENSGALG00000041619 1 0.846 - - - - - 0.846 - - - - myotrophin [Source:NCBI gene;Acc:395702]
89. CYP2U1 ENSGALG00000027908 13 0.845 - - - - - - 0.845 - - - cytochrome P450 family 2 subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:20582]
90. COL15A1 ENSGALG00000034119 9 0.845 - - - - - - 0.845 - - - collagen type XV alpha 1 chain, transcript variant X6
91. PAPPA2 40 0.845 - - - - - - 0.845 - - - pappalysin 2
92. TNS4 ENSGALG00000028308 2 0.845 - - - - - - 0.845 - - - tensin 4 [Source:HGNC Symbol;Acc:HGNC:24352]
93. PLEKHG5 ENSGALG00000027476 42 0.845 - - - - - - 0.845 - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
94. ENSGALG00000016136 ENSGALG00000016136 33 0.845 - - - - - - 0.845 - - -
95. CRB2 ENSGALG00000001169 23 0.845 - - - - - - 0.845 - - - crumbs 2, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:18688]
96. PTPN13 ENSGALG00000011078 62 0.845 - - - - - - 0.845 - - - protein tyrosine phosphatase, non-receptor type 13, transcript variant X7
97. LOC100859850 ENSGALG00000000803 3 0.845 - - - - - - 0.845 - - - lisH domain-containing protein C1711.05-like
98. B3GNTL1 ENSGALG00000001433 22 0.845 - - - - - - 0.845 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
99. TSC1 34 0.845 - - - - - - 0.845 - - - tuberous sclerosis 1, transcript variant X1
100. PWP2 60 0.845 - - - - - - 0.845 - - - PWP2, small subunit processome component

There are 160 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA