Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CASQ2

Gene Name Gene ID Reads Annotation
CASQ2 ENSGALG00000015018 157 calsequestrin 2 [Source:NCBI gene;Acc:395198]











Genes with expression patterns similar to CASQ2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CASQ2 ENSGALG00000015018 157 7 1.000 - 1.000 1.000 1.000 1.000 1.000 - - 1.000 calsequestrin 2 [Source:NCBI gene;Acc:395198]
2. gga-mir-7474 ENSGALG00000033766 5727 1.476 - - 0.712 - - - - - - 0.764 gga-mir-7474 [Source:miRBase;Acc:MI0024147]
3. VAMP1 ENSGALG00000022955 1 1 - - - - - 1.000 - - - - vesicle-associated membrane protein 1 (synaptobrevin 1) [Source:NCBI gene;Acc:418273]
4. ENSGALG00000012780 ENSGALG00000012780 10 1 - - - - - 1.000 - - - -
5. TOM1L2 ENSGALG00000004902 89 1 - - - - - 1.000 - - - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
6. PEX5L ENSGALG00000043386 5 1 - - - - - 1.000 - - - - peroxisomal biogenesis factor 5 like [Source:HGNC Symbol;Acc:HGNC:30024]
7. JAKMIP1 ENSGALG00000015528 11 1 - - - - - 1.000 - - - - janus kinase and microtubule interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26460]
8. CAMK2A ENSGALG00000005621 3 1 - - - - - 1.000 - - - - calcium/calmodulin dependent protein kinase II alpha [Source:NCBI gene;Acc:374175]
9. ADCY5 ENSGALG00000031244 10 1 - - - - - 1.000 - - - - adenylate cyclase 5 [Source:NCBI gene;Acc:395340]
10. CCDC177 ENSGALG00000026215 10 1 - - - - - 1.000 - - - - coiled-coil domain containing 177
11. CTSEAL ENSGALG00000010018 0 1 - - - - - 1.000 - - - - Gallus gallus cathepsin E-A-like (CTSEAL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318427]
12. GRAMD1B ENSGALG00000006494 5 1 - - - - - 1.000 - - - - GRAM domain containing 1B [Source:HGNC Symbol;Acc:HGNC:29214]
13. TTLL9 ENSGALG00000006460 11 1 - - - - - 1.000 - - - - tubulin tyrosine ligase like 9 [Source:HGNC Symbol;Acc:HGNC:16118]
14. KEL ENSGALG00000014736 18 1 - - - - - 1.000 - - - - Kell blood group, metallo-endopeptidase, transcript variant X4
15. TEX2L ENSGALG00000005421 52 1 - - - - - 1.000 - - - - testis expressed 2-like, transcript variant X1
16. MBLAC2 ENSGALG00000014649 16 1 - - - - - 1.000 - - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
17. RAB9B ENSGALG00000004918 2 1 - - - - - 1.000 - - - - RAB9B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14090]
18. MGAT4D ENSGALG00000009830 23 1 - - - - - 1.000 - - - - MGAT4 family member D [Source:HGNC Symbol;Acc:HGNC:43619]
19. TCFL5 ENSGALG00000045499 2 1 - - - - - 1.000 - - - - transcription factor like 5 [Source:HGNC Symbol;Acc:HGNC:11646]
20. C17orf58 ENSGALG00000003590 4 1 - - - - - 1.000 - - - - chromosome 17 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:27568]
21. GABRA5 ENSGALG00000016744 12 1 - - - - - 1.000 - - - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
22. uc_3 uc_3 1 1 - - - - - 1.000 - - - -
23. ENSGALG00000019291 ENSGALG00000019291 4 1 - - - - - 1.000 - - - -
24. B3GAT1 ENSGALG00000001611 0 1 - - - - - 1.000 - - - - beta-1,3-glucuronyltransferase 1 [Source:NCBI gene;Acc:373949]
25. LOC422926 ENSGALG00000027090 16 1 - - - - - 1.000 - - - - uncharacterized LOC422926
26. DCDC2B ENSGALG00000046649 3 1 - - - - - 1.000 - - - - doublecortin domain containing 2B [Source:HGNC Symbol;Acc:HGNC:32576]
27. ENSGALG00000019135 ENSGALG00000019135 0 1 - - - - - 1.000 - - - -
28. ENSGALG00000003188 ENSGALG00000003188 2 1 - - - - - 1.000 - - - -
29. PTHRP PTHRP 8 1 - - - - - 1.000 - - - -
30. ZPBP ENSGALG00000013083 26 1 - - - - - 1.000 - - - - zona pellucida binding protein [Source:NCBI gene;Acc:404537]
31. FUK ENSGALG00000002648 9 1 - - - - - 1.000 - - - - fucokinase [Source:HGNC Symbol;Acc:HGNC:29500]
32. VWC2L ENSGALG00000003472 13 1 - - - - - 1.000 - - - - von Willebrand factor C domain containing protein 2 like [Source:HGNC Symbol;Acc:HGNC:37203]
33. CABLES2 ENSGALG00000005345 6 1 - - - - - 1.000 - - - - Cdk5 and Abl enzyme substrate 2 [Source:HGNC Symbol;Acc:HGNC:16143]
34. CCR4 ENSGALG00000039146 20 1 - - - - - 1.000 - - - - C-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1605]
35. CDH7 ENSGALG00000013782 11 1 - - - - - 1.000 - - - - cadherin 7 [Source:NCBI gene;Acc:374007]
36. GSAP ENSGALG00000008312 12 1 - - - - - 1.000 - - - - gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
37. WDR72 ENSGALG00000004545 5 1 - - - - - 1.000 - - - - WD repeat domain 72 [Source:HGNC Symbol;Acc:HGNC:26790]
38. ENSGALG00000005344 ENSGALG00000005344 6 1 - - - - - 1.000 - - - -
39. AGPAT4 ENSGALG00000011571 4 1 - - - - - 1.000 - - - - 1-acylglycerol-3-phosphate O-acyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:20885]
40. DISP2 ENSGALG00000031266 5 1 - - - - - 1.000 - - - - dispatched RND transporter family member 2 [Source:HGNC Symbol;Acc:HGNC:19712]
41. ENSGALG00000006582 ENSGALG00000006582 8 1 - - - - - 1.000 - - - -
42. CCDC181 ENSGALG00000015221 10 1 - - - - - 1.000 - - - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
43. HDC ENSGALG00000023436 3 1 - - - - - 1.000 - - - - histidine decarboxylase [Source:NCBI gene;Acc:415454]
44. ABCA12 ENSGALG00000003553 9 1 - - - - - 1.000 - - - - ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
45. SPP2 ENSGALG00000004129 34 1 - - - - - 1.000 - - - - secreted phosphoprotein 2 [Source:NCBI gene;Acc:396080]
46. NDST4 ENSGALG00000012015 43 1 - - - - - 1.000 - - - - N-deacetylase and N-sulfotransferase 4 [Source:HGNC Symbol;Acc:HGNC:20779]
47. VIL1 ENSGALG00000037286 5 1 - - - - - 1.000 - - - - villin 1 [Source:NCBI gene;Acc:396423]
48. ACTL10 ACTL10 3 1 - - - - - 1.000 - - - -
49. RNF170 ENSGALG00000015386 296 0.97 - - - - - 0.970 - - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
50. RCOR1 ENSGALG00000011384 22 0.967 - - - - - 0.967 - - - - REST corepressor 1 [Source:HGNC Symbol;Acc:HGNC:17441]
51. OSGIN2 ENSGALG00000042840 83 0.964 - - - - - 0.964 - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
52. KIAA1549 ENSGALG00000012796 60 0.956 - - - - - 0.956 - - - - KIAA1549 [Source:HGNC Symbol;Acc:HGNC:22219]
53. PDCL2 ENSGALG00000013783 9 0.954 - - - - - 0.954 - - - - phosducin like 2 [Source:HGNC Symbol;Acc:HGNC:29524]
54. NPBWR1 ENSGALG00000015261 6 0.953 - - - - - 0.953 - - - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
55. ENSGALG00000022901 ENSGALG00000022901 19 0.936 - - - - - 0.936 - - - -
56. MAPK8 ENSGALG00000006109 51 0.926 - - - - - 0.926 - - - - mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]
57. DLST ENSGALG00000010286 19 0.902 - - - - - 0.902 - - - - dihydrolipoamide S-succinyltransferase [Source:NCBI gene;Acc:423357]
58. CROCC 5 0.893 - - - - - 0.893 - - - - ciliary rootlet coiled-coil, rootletin, transcript variant X6
59. SNORA4 SNORA4 12 0.888 - - - - - 0.888 - - - -
60. MAP3K21 ENSGALG00000011008 54 0.885 - - - - - 0.885 - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
61. MTHFD2L ENSGALG00000010855 14 0.881 - - - - - 0.881 - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:HGNC Symbol;Acc:HGNC:31865]
62. CWH43 ENSGALG00000041921 68 0.876 - - - - - 0.876 - - - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
63. OLFML2B ENSGALG00000002667 8 0.873 - - - - - 0.873 - - - - olfactomedin like 2B [Source:HGNC Symbol;Acc:HGNC:24558]
64. SBSPONL ENSGALG00000005862 129 0.871 - - - - - 0.871 - - - - somatomedin B and thrombospondin type 1 domain containing like [Source:NCBI gene;Acc:416923]
65. Mar-08 Mar-08 106 0.849 - - - - - 0.849 - - - -
66. SNAPC4 ENSGALG00000044726 36 0.836 - - - - - 0.836 - - - - small nuclear RNA activating complex polypeptide 4 [Source:HGNC Symbol;Acc:HGNC:11137]
67. ENSGALG00000024437 ENSGALG00000024437 73 0.807 - - - - - 0.807 - - - -
68. RECK ENSGALG00000036829 252 0.806 - - - - - 0.806 - - - - reversion inducing cysteine rich protein with kazal motifs [Source:HGNC Symbol;Acc:HGNC:11345]
69. EPC1 ENSGALG00000007169 101 0.799 - - - - - 0.799 - - - - enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
70. GJD2 ENSGALG00000009845 236 0.796 - - - - - 0.796 - - - - gap junction protein delta 2 [Source:NCBI gene;Acc:395273]
71. RAPSN ENSGALG00000008100 53 0.795 - - - - - 0.795 - - - - receptor associated protein of the synapse [Source:NCBI gene;Acc:395986]
72. ENSGALG00000012332 ENSGALG00000012332 71 0.795 - - - - - 0.795 - - - -
73. ENSGALG00000004351 ENSGALG00000004351 2 0.792 - - - - - 0.792 - - - -
74. ADAP1 ENSGALG00000003819 13 0.784 - - - - - 0.784 - - - - ArfGAP with dual PH domains 1 [Source:HGNC Symbol;Acc:HGNC:16486]
75. ENSGALG00000029113 ENSGALG00000029113 737 0.783 - - - - - 0.783 - - - -
76. PPP1R1C ENSGALG00000008896 378 0.783 - - - - - 0.783 - - - - protein phosphatase 1 regulatory inhibitor subunit 1C [Source:HGNC Symbol;Acc:HGNC:14940]
77. MCM8 ENSGALG00000009195 9 0.775 - - - - - 0.775 - - - - minichromosome maintenance 8 homologous recombination repair factor [Source:NCBI gene;Acc:421314]
78. PRKAR2B ENSGALG00000008060 40 0.775 - - - - - 0.775 - - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
79. LAMP2 ENSGALG00000008572 198 0.771 - - - - - 0.771 - - - - lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
80. MAMDC2 ENSGALG00000015115 1512 0.77 - - - - - - - - - 0.770 MAM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23673]
81. CCDC141 ENSGALG00000020788 606 0.769 - - - - - - - - - 0.769 coiled-coil domain containing 141, transcript variant X5
82. TMEM156 ENSGALG00000024490 9 0.767 - - - - - 0.767 - - - - transmembrane protein 156, transcript variant X5
83. SEC24D ENSGALG00000011998 68 0.764 - - - - - 0.764 - - - - SEC24 homolog D, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10706]
84. NLGN4 NLGN4 283 0.763 - - - - - 0.763 - - - -
85. ACTC1 ENSGALG00000009844 20914 0.758 - - - - - - - - - 0.758 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
86. PLEKHA8 ENSGALG00000011185 101 0.745 - - - - - 0.745 - - - - pleckstrin homology domain containing A8 [Source:HGNC Symbol;Acc:HGNC:30037]
87. TNNT3 ENSGALG00000006572 1652 0.736 - - - - - - - - - 0.736 troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
88. DCLK1 ENSGALG00000041263 40 0.731 - - - - - 0.731 - - - - doublecortin like kinase 1 [Source:NCBI gene;Acc:418903]
89. SARM1 ENSGALG00000003595 15 0.731 - - - - - 0.731 - - - - sterile alpha and TIR motif containing 1 [Source:HGNC Symbol;Acc:HGNC:17074]
90. EDAR ENSGALG00000016809 81 0.729 - - - - - 0.729 - - - - ectodysplasin A receptor [Source:NCBI gene;Acc:428015]
91. SERPINC1 ENSGALG00000004591 68 0.728 - - - - - 0.728 - - - - Gallus gallus serpin family C member 1 (SERPINC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001353945]
92. H1F0 ENSGALG00000044240 1206 0.728 - - - - - - 0.728 - - - H1 histone family, member 0 [Source:NCBI gene;Acc:693250]
93. SEC31B ENSGALG00000005722 13 0.725 - - - - - 0.725 - - - - SEC31 homolog B, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:23197]
94. ARV1 ENSGALG00000011155 38 0.724 - - - - - 0.724 - - - - ARV1 homolog, fatty acid homeostasis modulator [Source:HGNC Symbol;Acc:HGNC:29561]
95. DLX5 ENSGALG00000009129 1395 0.724 - - - - - 0.724 - - - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
96. ACTN2 ENSGALG00000014463 1724 0.723 - - - - - - - - - 0.723 actinin alpha 2 [Source:NCBI gene;Acc:396263]
97. KLHDC8B ENSGALG00000006776 76 0.721 - - - - - 0.721 - - - - kelch domain containing 8B [Source:HGNC Symbol;Acc:HGNC:28557]
98. ENSGALG00000002005 ENSGALG00000002005 987 0.719 - - - - - 0.719 - - - -
99. GAREM GAREM 16 0.719 - - - - - 0.719 - - - -
100. PRAG1 ENSGALG00000019003 293 0.718 - - - - - 0.718 - - - - PEAK1 related, kinase-activating pseudokinase 1 [Source:HGNC Symbol;Acc:HGNC:25438]

There are 5 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA