Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CASP3

Gene Name Gene ID Reads Annotation
CASP3 ENSGALG00000010638 11572 caspase 3 [Source:NCBI gene;Acc:395476]











Genes with expression patterns similar to CASP3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CASP3 ENSGALG00000010638 11572 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 caspase 3 [Source:NCBI gene;Acc:395476]
2. AN1ZNF5L ENSGALG00000014589 21148 2.377 - - - - 0.863 - 0.779 0.735 - - AN1-type zinc finger protein 5-like, transcript variant X2
3. CHMP5 ENSGALG00000013160 13347 1.871 - - - - - - 0.875 0.996 - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
4. MRPS17 ENSGALG00000002379 30243 1.835 - - - - - - 0.857 0.978 - - mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
5. NOC4L ENSGALG00000002272 9644 1.785 - - - - - - 0.821 0.964 - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
6. TMEM184C ENSGALG00000010019 7856 1.774 - - - - 0.927 - 0.847 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
7. RUVBL1 ENSGALG00000005931 9379 1.768 - - - - 0.920 - 0.848 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
8. NDUFA4 ENSGALG00000025999 53323 1.768 - - - - 0.935 - - 0.833 - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
9. PRPS1 ENSGALG00000004908 27994 1.76 - - - - 0.905 - - 0.855 - - phosphoribosyl pyrophosphate synthetase 1
10. CENPP ENSGALG00000004687 6707 1.755 - - - - - - 0.809 0.946 - - centromere protein P [Source:NCBI gene;Acc:415952]
11. TTC37 ENSGALG00000014670 5715 1.75 - - - - 0.914 - 0.836 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
12. RIC8A ENSGALG00000004191 6094 1.737 - - - - - - 0.746 0.991 - - RIC8 guanine nucleotide exchange factor A [Source:NCBI gene;Acc:422987]
13. UTP11L UTP11L 11927 1.731 - - - - - - 0.836 0.895 - -
14. NUPL1 NUPL1 8197 1.729 - - - - 0.918 - 0.811 - - -
15. FAM125B FAM125B 2953 1.715 - - - - - - 0.724 0.991 - -
16. CTSL2 CTSL2 7966 1.697 - - - - 0.905 - 0.792 - - -
17. AP1M1 ENSGALG00000003959 31761 1.696 - - - - 0.858 - - 0.838 - - adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
18. ILF2 ENSGALG00000011570 23050 1.695 - - - - 0.864 - 0.831 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
19. GLRX5 ENSGALG00000011079 28943 1.694 - - - - 0.833 - 0.861 - - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
20. UBE2E3 ENSGALG00000020793 9517 1.689 - - - - 0.909 - 0.780 - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
21. CYB5R2 ENSGALG00000032372 7967 1.683 - - - - 0.878 - 0.805 - - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
22. TMEM70 ENSGALG00000033568 10720 1.683 - - - - 0.843 - 0.840 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
23. NUP188 ENSGALG00000043394 9288 1.678 - - - - 0.896 - - 0.782 - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
24. SEC11A ENSGALG00000037553 32123 1.665 - - - - - - 0.762 0.903 - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
25. KLF3 ENSGALG00000041717 2787 1.663 - - - - 0.918 - 0.745 - - - Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]
26. THUMPD3 ENSGALG00000008394 17711 1.662 - - - - 0.911 - 0.751 - - - THUMP domain containing 3, transcript variant X2
27. TRAPPC6B ENSGALG00000010157 7567 1.657 - - - - 0.896 - 0.761 - - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
28. SEC22B ENSGALG00000039704 16080 1.653 - - - - 0.897 - 0.756 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
29. METAP2 ENSGALG00000011377 16311 1.653 - - - - 0.825 - 0.828 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
30. MYBBP1A ENSGALG00000001363 10331 1.652 - - - - 0.903 - 0.749 - - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
31. ARF6 ENSGALG00000026944 22014 1.652 - - - - 0.849 - 0.803 - - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
32. CCDC59 ENSGALG00000028648 9272 1.65 - - - - - - 0.786 0.864 - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
33. APPBP2 ENSGALG00000005314 6447 1.643 - - - - 0.918 - 0.725 - - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
34. BRMS1L ENSGALG00000010093 4964 1.641 - - - - 0.914 - 0.727 - - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
35. ZFR ENSGALG00000003235 8466 1.64 - - - - 0.844 - 0.796 - - - zinc finger RNA binding protein, transcript variant X3
36. MPRIP ENSGALG00000004798 6700 1.639 - - - - 0.895 - 0.744 - - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
37. TIMM10 ENSGALG00000004845 31395 1.636 - - - - 0.908 - 0.728 - - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
38. RASA2 ENSGALG00000002850 2231 1.636 - - - - 0.917 - 0.719 - - - RAS p21 protein activator 2 [Source:NCBI gene;Acc:424782]
39. PDHB ENSGALG00000029576 12254 1.634 - - - - 0.927 - 0.707 - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
40. ROMO1 ENSGALG00000027416 9560 1.633 - - - - 0.921 - 0.712 - - - reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
41. PLA2G12A ENSGALG00000012185 5261 1.628 - - - - 0.897 - 0.731 - - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
42. EBNA1BP2 ENSGALG00000009045 17453 1.627 - - - - - - 0.820 0.807 - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
43. ITM2A ENSGALG00000004107 29262 1.626 - - - - 0.907 - 0.719 - - - integral membrane protein 2A [Source:NCBI gene;Acc:422145]
44. PPP1R7 ENSGALG00000031766 22187 1.62 - - - - 0.894 - 0.726 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
45. SLC25A24 ENSGALG00000001938 3671 1.614 - - - - 0.908 - 0.706 - - - solute carrier family 25 member 24 [Source:HGNC Symbol;Acc:HGNC:20662]
46. GMPPA ENSGALG00000002417 10383 1.611 - - - - 0.773 - 0.838 - - - GDP-mannose pyrophosphorylase A, transcript variant X2
47. FKBP12 FKBP12 64317 1.606 - - - - 0.755 - 0.851 - - -
48. GTF2B ENSGALG00000006205 6950 1.606 - - - - 0.902 - 0.704 - - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
49. PIK3IP1 ENSGALG00000006942 8388 1.604 - - - - - - 0.753 0.851 - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
50. PPIH ENSGALG00000004874 25558 1.597 - - - - 0.778 - 0.819 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
51. IGF2BP2 ENSGALG00000033195 11421 1.596 - - - - 0.858 - 0.738 - - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
52. ENSGALG00000009771 ENSGALG00000009771 10273 1.585 - - - - 0.827 - 0.758 - - -
53. EXOSC2 ENSGALG00000040373 24275 1.567 - - - - 0.848 - 0.719 - - - exosome component 2 [Source:NCBI gene;Acc:417182]
54. ATP5H 53898 1.477 - - - - 0.750 - 0.727 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit D, transcript variant X2
55. NDUFAF2 ENSGALG00000027564 7302 1.471 - - - - 0.718 - 0.753 - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
56. POLR2K ENSGALG00000036019 8962 1.453 - - - - 0.726 - 0.727 - - - RNA polymerase II subunit K [Source:HGNC Symbol;Acc:HGNC:9198]
57. EIF3D ENSGALG00000012529 40887 0.994 - - - - - - - 0.994 - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
58. DDX24 ENSGALG00000010884 5485 0.993 - - - - - - - 0.993 - - DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]
59. RBFA ENSGALG00000036067 6542 0.993 - - - - - - - 0.993 - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
60. JKAMP ENSGALG00000012009 5781 0.992 - - - - - - - 0.992 - - JNK1/MAPK8-associated membrane protein [Source:NCBI gene;Acc:423530]
61. PDCD2L 4843 0.992 - - - - - - - 0.992 - - programmed cell death 2-like
62. TMTC2 ENSGALG00000010975 7040 0.992 - - - - - - - 0.992 - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
63. PGM1 ENSGALG00000011016 3391 0.992 - - - - - - - 0.992 - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
64. NECAP1 ENSGALG00000037656 5181 0.992 - - - - - - - 0.992 - - NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
65. ENSGALG00000010034 ENSGALG00000010034 3293 0.991 - - - - - - - 0.991 - -
66. GGA3 ENSGALG00000007992 3566 0.991 - - - - - - - 0.991 - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
67. RNF113A ENSGALG00000000538 3985 0.991 - - - - - - - 0.991 - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
68. ATL1 ENSGALG00000012339 3789 0.991 - - - - - - - 0.991 - - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
69. RRN3 ENSGALG00000041989 3934 0.991 - - - - - - - 0.991 - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
70. UBALD1 ENSGALG00000007619 8536 0.991 - - - - - - - 0.991 - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
71. HBXIP HBXIP 8637 0.991 - - - - - - - 0.991 - -
72. SCLT1 2397 0.99 - - - - - - - 0.990 - - sodium channel and clathrin linker 1, transcript variant X6
73. NPFF1 NPFF1 3177 0.99 - - - - - - - 0.990 - -
74. CARKD CARKD 2914 0.99 - - - - - - - 0.990 - -
75. MADD ENSGALG00000008181 2273 0.99 - - - - - - - 0.990 - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
76. CHTOP ENSGALG00000042129 24112 0.99 - - - - - - - 0.990 - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
77. YTHDC2 2266 0.99 - - - - - - - 0.990 - - YTH domain containing 2, transcript variant X3
78. KIAA0895L 1739 0.989 - - - - - - - 0.989 - - KIAA0895 like, transcript variant X4
79. FXN ENSGALG00000015108 1867 0.989 - - - - - - - 0.989 - - frataxin [Source:HGNC Symbol;Acc:HGNC:3951]
80. MMADHC ENSGALG00000012473 9026 0.987 - - - - - - - 0.987 - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
81. ARHGAP11A ENSGALG00000009731 6817 0.981 - - - - - - - 0.981 - - Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
82. SMC3 ENSGALG00000008585 16618 0.967 - - - - - - - 0.967 - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
83. NDUFA2 ENSGALG00000040626 27899 0.965 - - - - - - - 0.965 - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
84. PRKG1 ENSGALG00000003805 4654 0.959 - - - - - - - 0.959 - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
85. SQLE ENSGALG00000036915 4172 0.956 - - - - - - - 0.956 - - squalene epoxidase [Source:NCBI gene;Acc:420335]
86. BSDC1 ENSGALG00000003405 3701 0.948 - - - - - - - 0.948 - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
87. GCLM ENSGALG00000005782 15789 0.945 - - - - - - - 0.945 - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
88. ALYREF ENSGALG00000007237 48479 0.94 - - - - - - - 0.940 - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
89. MCTS1 ENSGALG00000008517 27514 0.931 - - - - - - 0.931 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
90. MSH2 ENSGALG00000008962 9709 0.927 - - - - 0.927 - - - - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
91. SNRNP40 ENSGALG00000000615 32298 0.927 - - - - - - 0.927 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
92. PWP1 ENSGALG00000012631 10536 0.927 - - - - 0.927 - - - - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
93. COG6 ENSGALG00000017035 2777 0.924 - - - - 0.924 - - - - - component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
94. UTP3 ENSGALG00000011553 8814 0.924 - - - - 0.924 - - - - - UTP3, small subunit processome component homolog (S. cerevisiae)
95. DAP3 ENSGALG00000019796 13278 0.923 - - - - 0.923 - - - - - death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
96. REXO5 ENSGALG00000002239 2466 0.922 - - - - 0.922 - - - - - RNA exonuclease 5 [Source:NCBI gene;Acc:427001]
97. ZZZ3 ENSGALG00000008988 3132 0.922 - - - - 0.922 - - - - - zinc finger ZZ-type containing 3, transcript variant X5
98. COL4A6 ENSGALG00000008266 6374 0.921 - - - - - - - 0.921 - - collagen type IV alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:2208]
99. TMEM203 ENSGALG00000008925 3033 0.921 - - - - 0.921 - - - - - transmembrane protein 203 [Source:HGNC Symbol;Acc:HGNC:28217]
100. TPMT ENSGALG00000012687 9537 0.92 - - - - 0.920 - - - - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]

There are 1000 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA