Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CASP1

Gene Name Gene ID Reads Annotation
CASP1 ENSGALG00000001049 1067 caspase 1, transcript variant X2











Genes with expression patterns similar to CASP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CASP1 ENSGALG00000001049 1067 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 caspase 1, transcript variant X2
2. STRN3 ENSGALG00000040464 9045 1.663 - - 0.886 - - - - 0.777 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
3. KIAA0195 KIAA0195 48 0.978 - - 0.978 - - - - - - -
4. RHOC ENSGALG00000001569 53 0.978 - - 0.978 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
5. POMC ENSGALG00000016600 99 0.978 - - 0.978 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
6. MGMT ENSGALG00000042949 53 0.978 - - 0.978 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
7. PLEKHG5 ENSGALG00000027476 42 0.978 - - 0.978 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
8. GRIK3 ENSGALG00000002098 111 0.977 - - 0.977 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
9. ENSGALG00000023180 ENSGALG00000023180 83 0.976 - - 0.976 - - - - - - -
10. LGALS3 ENSGALG00000012173 3306 0.976 - - 0.976 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
11. ADAMTS2 ENSGALG00000032974 141 0.975 - - 0.975 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
12. MT1 MT1 218 0.974 - - 0.974 - - - - - - -
13. ACOT9 ENSGALG00000016351 330 0.974 - - 0.974 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
14. PKP4 ENSGALG00000012561 3087 0.974 - - 0.974 - - - - - - - plakophilin 4 [Source:NCBI gene;Acc:424328]
15. SORCS1 ENSGALG00000008465 468 0.974 - - 0.974 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
16. GOLGA2 ENSGALG00000004881 677 0.973 - - 0.973 - - - - - - - golgin A2, transcript variant X7
17. TMEM97 ENSGALG00000005702 2037 0.968 - - 0.968 - - - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
18. IP6K1 ENSGALG00000002510 827 0.965 - - 0.965 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
19. NCAPD3 ENSGALG00000001491 221 0.965 - - 0.965 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
20. AP3M1 ENSGALG00000005070 712 0.964 - - 0.964 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
21. LRP2 ENSGALG00000010858 363 0.964 - - 0.964 - - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
22. FBXO34 ENSGALG00000032563 656 0.964 - - 0.964 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
23. EIF2AK2 ENSGALG00000010560 749 0.963 - - 0.963 - - - - - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
24. PCP4 ENSGALG00000022819 880 0.962 - - 0.962 - - - - - - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
25. LYPD6B ENSGALG00000028759 831 0.962 - - 0.962 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
26. ZEB2 ENSGALG00000040465 315 0.962 - - 0.962 - - - - - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
27. RPUSD1 ENSGALG00000005315 651 0.962 - - 0.962 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
28. ATP2B2 ENSGALG00000030908 584 0.962 - - 0.962 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
29. YLPM1 671 0.961 - - 0.961 - - - - - - - YLP motif containing 1
30. ENTPD5 ENSGALG00000010202 69 0.961 - - 0.961 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
31. INTS9 ENSGALG00000016631 742 0.96 - - 0.960 - - - - - - - integrator complex subunit 9 [Source:NCBI gene;Acc:422023]
32. TMEM38B ENSGALG00000027472 2465 0.959 - - 0.959 - - - - - - - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
33. ZNF423 ENSGALG00000003891 103 0.959 - - 0.959 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
34. CCDC25 ENSGALG00000016586 351 0.958 - - 0.958 - - - - - - - coiled-coil domain containing 25 [Source:HGNC Symbol;Acc:HGNC:25591]
35. C8H1ORF52 C8H1ORF52 118 0.958 - - 0.958 - - - - - - -
36. SLC4A4 ENSGALG00000031105 534 0.958 - - 0.958 - - - - - - - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
37. CXorf30 CXorf30 172 0.957 - - 0.957 - - - - - - -
38. C19H17ORF85 C19H17ORF85 2538 0.957 - - 0.957 - - - - - - -
39. USP40 ENSGALG00000004228 1137 0.956 - - 0.956 - - - - - - - ubiquitin specific peptidase 40 [Source:NCBI gene;Acc:100859211]
40. LZIC ENSGALG00000002616 9052 0.955 - - 0.955 - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
41. GBGT1 ENSGALG00000003340 399 0.955 - - 0.955 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [Source:NCBI gene;Acc:417163]
42. TSEN2 ENSGALG00000004981 1929 0.955 - - 0.955 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
43. VRTN ENSGALG00000010232 692 0.952 - - 0.952 - - - - - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
44. LHFP 167 0.952 - - 0.952 - - - - - - - lipoma HMGIC fusion partner
45. TRIM45 ENSGALG00000014818 1258 0.952 - - 0.952 - - - - - - - tripartite motif containing 45 [Source:HGNC Symbol;Acc:HGNC:19018]
46. MAN1A1 ENSGALG00000014878 1061 0.951 - - 0.951 - - - - - - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
47. RAB3B ENSGALG00000010567 894 0.951 - - 0.951 - - - - - - - RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
48. MYO18A ENSGALG00000003741 1023 0.951 - - 0.951 - - - - - - - myosin XVIIIA [Source:HGNC Symbol;Acc:HGNC:31104]
49. GNMT ENSGALG00000043290 3288 0.949 - - 0.949 - - - - - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
50. SULT2B1L1 ENSGALG00000023472 569 0.948 - - 0.948 - - - - - - - sulfotransferase family cytosolic 2B member 1-like 1
51. BMP2 ENSGALG00000029301 379 0.947 - - 0.947 - - - - - - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
52. ITPR1 ENSGALG00000008294 1226 0.946 - - 0.946 - - - - - - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
53. FOPNL ENSGALG00000006532 2922 0.945 - - 0.945 - - - - - - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
54. Sep-02 Sep-02 206 0.944 - - 0.944 - - - - - - -
55. EXTL2 ENSGALG00000027984 808 0.943 - - 0.943 - - - - - - - exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
56. WDR11 ENSGALG00000035013 3393 0.943 - - 0.943 - - - - - - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
57. KIAA0930 ENSGALG00000014226 1243 0.943 - - 0.943 - - - - - - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
58. FRMD3 ENSGALG00000012577 999 0.943 - - 0.943 - - - - - - - FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
59. ENSGALG00000028359 ENSGALG00000028359 479 0.941 - - 0.941 - - - - - - -
60. B3GNT7 ENSGALG00000007701 929 0.941 - - 0.941 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
61. BCCIP ENSGALG00000006617 13291 0.941 - - 0.941 - - - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
62. ZNF276 ENSGALG00000000513 2410 0.94 - - 0.940 - - - - - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
63. TRIM37 ENSGALG00000005084 4036 0.94 - - 0.940 - - - - - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
64. WDR89 ENSGALG00000011827 1481 0.94 - - 0.940 - - - - - - - WD repeat domain 89 [Source:NCBI gene;Acc:423510]
65. DLX5 ENSGALG00000009129 1395 0.94 - - 0.940 - - - - - - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
66. OSGEPL1 ENSGALG00000037727 1879 0.939 - - 0.939 - - - - - - - O-sialoglycoprotein endopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:23075]
67. SDCBP ENSGALG00000015436 1228 0.938 - - 0.938 - - - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
68. DAPK3 ENSGALG00000037733 6215 0.938 - - 0.938 - - - - - - - death-associated protein kinase 3, transcript variant X2
69. RUFY2 1442 0.938 - - 0.938 - - - - - - - RUN and FYVE domain containing 2, transcript variant X1
70. C5H14ORF166 C5H14ORF166 24176 0.937 - - 0.937 - - - - - - -
71. MPG ENSGALG00000028691 1874 0.937 - - 0.937 - - - - - - - N-methylpurine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7211]
72. MAK16 ENSGALG00000001663 7455 0.935 - - 0.935 - - - - - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
73. TXNDC12 ENSGALG00000010569 13822 0.933 - - 0.933 - - - - - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
74. FBF1 ENSGALG00000002179 1738 0.933 - - 0.933 - - - - - - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
75. FURIN ENSGALG00000008341 2609 0.933 - - 0.933 - - - - - - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
76. LMO4 ENSGALG00000006252 3686 0.932 - - 0.932 - - - - - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
77. DDX18 ENSGALG00000012147 12463 0.931 - - 0.931 - - - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
78. LRR1 ENSGALG00000012230 1062 0.931 - - 0.931 - - - - - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
79. METTL13 ENSGALG00000003206 1503 0.93 - - 0.930 - - - - - - - methyltransferase like 13 [Source:HGNC Symbol;Acc:HGNC:24248]
80. TRANK1 ENSGALG00000037629 2268 0.93 - - 0.930 - - - - - - - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
81. DZIP1 ENSGALG00000016895 681 0.929 - - 0.929 - - - - - - - DAZ interacting zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:20908]
82. EPB41 ENSGALG00000001329 787 0.929 - - 0.929 - - - - - - - erythrocyte membrane protein band 4.1 [Source:NCBI gene;Acc:396493]
83. CDV3 ENSGALG00000032316 693 0.929 - - 0.929 - - - - - - - CDV3 homolog [Source:NCBI gene;Acc:420693]
84. ATG10 ENSGALG00000027714 1100 0.929 - - 0.929 - - - - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
85. KLHL15 ENSGALG00000016345 1638 0.928 - - 0.928 - - - - - - - kelch like family member 15 [Source:NCBI gene;Acc:418598]
86. SPON2 ENSGALG00000038433 1240 0.926 - - 0.926 - - - - - - - spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
87. TSN ENSGALG00000011652 905 0.925 - - 0.925 - - - - - - - translin [Source:NCBI gene;Acc:395955]
88. ISCU ENSGALG00000004869 6852 0.925 - - 0.925 - - - - - - - iron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]
89. PIH1D3 ENSGALG00000004870 1365 0.924 - - 0.924 - - - - - - - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
90. PDCD4 ENSGALG00000008700 574 0.924 - - 0.924 - - - - - - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
91. WBSCR17 581 0.922 - - 0.922 - - - - - - - Williams-Beuren syndrome chromosome region 17, transcript variant X1
92. NLGN1 ENSGALG00000040938 651 0.919 - - 0.919 - - - - - - - neuroligin 1 [Source:NCBI gene;Acc:424980]
93. TMEM128 ENSGALG00000014992 6567 0.919 - - 0.919 - - - - - - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
94. TMEM200C ENSGALG00000030210 1434 0.918 - - 0.918 - - - - - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
95. SYBU ENSGALG00000036527 1221 0.918 - - 0.918 - - - - - - - syntabulin [Source:HGNC Symbol;Acc:HGNC:26011]
96. PVALB1 PVALB1 267 0.917 - - 0.917 - - - - - - -
97. AMMECR1L ENSGALG00000026728 2134 0.917 - - 0.917 - - - - - - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
98. SNX2 ENSGALG00000005337 590 0.917 - - 0.917 - - - - - - - sorting nexin 2 [Source:NCBI gene;Acc:426797]
99. SOD2 ENSGALG00000011661 13178 0.916 - - 0.916 - - - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
100. ALG14 ENSGALG00000005583 2008 0.916 - - 0.916 - - - - - - - ALG14, UDP-N-acetylglucosaminyltransferase subunit [Source:NCBI gene;Acc:424484]

There are 335 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA