Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CASC5

Gene Name Gene ID Reads Annotation
CASC5 CASC5 695











Genes with expression patterns similar to CASC5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CASC5 CASC5 695 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. RAB33A ENSGALG00000024049 1993 0.86 - - - - - - 0.860 - - - RAB33A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9773]
3. COL12A1 ENSGALG00000015908 1300 0.847 - - - - - - 0.847 - - - collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
4. IMMP2L ENSGALG00000027876 962 0.837 - - - - - - - - 0.837 - inner mitochondrial membrane peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:14598]
5. C4 ENSGALG00000032231 1961 0.833 - - - - - - - - 0.833 - complement 4 [Source:NCBI gene;Acc:426611]
6. EMP2 ENSGALG00000027058 3925 0.827 - - - - - - 0.827 - - - epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
7. SGTB ENSGALG00000014768 1065 0.823 - - - - - - 0.823 - - - small glutamine rich tetratricopeptide repeat containing beta [Source:NCBI gene;Acc:427166]
8. SLC20A2 ENSGALG00000038336 1704 0.823 - - - - - - 0.823 - - - solute carrier family 20 member 2 [Source:NCBI gene;Acc:422493]
9. DHDDS ENSGALG00000029909 2229 0.822 - - - - - - 0.822 - - - dehydrodolichyl diphosphate synthase subunit [Source:HGNC Symbol;Acc:HGNC:20603]
10. MYLIP ENSGALG00000012704 983 0.808 - - - - - - - - 0.808 - myosin regulatory light chain interacting protein [Source:NCBI gene;Acc:420841]
11. ELMOD2 ENSGALG00000009836 177 0.802 - - - - - - - 0.802 - - ELMO domain containing 2 [Source:NCBI gene;Acc:422449]
12. NKRF ENSGALG00000008645 3531 0.802 - - - - - - 0.802 - - - NFKB repressing factor [Source:NCBI gene;Acc:422370]
13. N6AMT1 ENSGALG00000015802 5221 0.797 - - - - - - 0.797 - - - N-6 adenine-specific DNA methyltransferase 1 (putative) [Source:NCBI gene;Acc:418481]
14. TOPBP1 ENSGALG00000034461 3094 0.795 - - - - - - - - 0.795 - DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]
15. ERICH1 ENSGALG00000031021 1495 0.789 - - - - - - - - 0.789 - glutamate rich 1 [Source:NCBI gene;Acc:421904]
16. PLCH1 ENSGALG00000010312 1294 0.787 - - - - - - 0.787 - - - phospholipase C eta 1 [Source:HGNC Symbol;Acc:HGNC:29185]
17. DIP2C ENSGALG00000006652 1858 0.786 - - - - - - - - 0.786 - disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
18. MXRA7 ENSGALG00000001805 945 0.786 - - - - - - - 0.786 - - matrix remodeling associated 7 [Source:HGNC Symbol;Acc:HGNC:7541]
19. ARPP19 ENSGALG00000017370 1720 0.781 - - - - - - 0.781 - - - cAMP regulated phosphoprotein 19 [Source:NCBI gene;Acc:768853]
20. ENTPD4 ENSGALG00000000390 1394 0.78 - - - - - - 0.780 - - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
21. ENSGALG00000010963 ENSGALG00000010963 462 0.775 - - - - - - 0.775 - - -
22. C1H11ORF73 C1H11ORF73 10071 0.775 - - - - - - - - 0.775 -
23. KCTD3 ENSGALG00000009678 335 0.775 - - - - 0.775 - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
24. ARIH2 ENSGALG00000006956 3692 0.772 - - - - - - 0.772 - - - ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:416061]
25. AADAT ENSGALG00000009655 1692 0.772 - - - - - - 0.772 - - - aminoadipate aminotransferase [Source:HGNC Symbol;Acc:HGNC:17929]
26. GPR89 GPR89 2253 0.771 - - - - - - 0.771 - - -
27. CAPRIN1 ENSGALG00000013532 1699 0.771 - - - - - - - - 0.771 - cell cycle associated protein 1 [Source:NCBI gene;Acc:426151]
28. TMEM164 ENSGALG00000008076 734 0.77 - - - - - - 0.770 - - - transmembrane protein 164 [Source:NCBI gene;Acc:422344]
29. MPP4 ENSGALG00000008398 188 0.769 - - - - - - - 0.769 - - membrane palmitoylated protein 4 [Source:HGNC Symbol;Acc:HGNC:13680]
30. NPAS3 ENSGALG00000029022 1950 0.767 - - - - - - 0.767 - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
31. CFTR ENSGALG00000032986 424 0.765 - - - - - - - 0.765 - - cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
32. FAHD1 ENSGALG00000024041 1942 0.765 - - - - - - 0.765 - - - fumarylacetoacetate hydrolase domain containing 1 [Source:NCBI gene;Acc:416538]
33. PARP8 ENSGALG00000032991 17 0.764 - - - - - - - 0.764 - - poly(ADP-ribose) polymerase family member 8 [Source:HGNC Symbol;Acc:HGNC:26124]
34. TRAF3IP2 ENSGALG00000015026 26 0.764 - - - - - - - 0.764 - - TRAF3 interacting protein 2, transcript variant X1
35. EPS15 ENSGALG00000010543 1598 0.762 - - - - - - 0.762 - - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
36. EIF3E ENSGALG00000037067 36561 0.76 - - - - - - - - 0.760 - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
37. LSM14B ENSGALG00000005125 31 0.76 - - - - - - - - - 0.760 LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]
38. ABHD12 ENSGALG00000008525 5763 0.757 - - - - - - 0.757 - - - abhydrolase domain containing 12 [Source:NCBI gene;Acc:421249]
39. LOC776067 ENSGALG00000016808 9164 0.754 - - - - - - - - 0.754 - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
40. SLMO1 SLMO1 4357 0.753 - - - - - - 0.753 - - -
41. PRPS2 ENSGALG00000016592 165 0.749 - - - - - - - - 0.749 - phosphoribosyl pyrophosphate synthetase 2 [Source:NCBI gene;Acc:418639]
42. ST7 ENSGALG00000037206 673 0.747 - - - - - - 0.747 - - - suppression of tumorigenicity 7 [Source:NCBI gene;Acc:417770]
43. TMEM80 ENSGALG00000045337 775 0.747 - - - - - - - 0.747 - - transmembrane protein 80 [Source:HGNC Symbol;Acc:HGNC:27453]
44. ENSGALG00000013357 ENSGALG00000013357 2282 0.746 - - - - - - 0.746 - - -
45. LEO1 ENSGALG00000004696 111 0.745 - - - - - - - 0.745 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:NCBI gene;Acc:769405]
46. SFMBT2 ENSGALG00000009279 125 0.744 - - - - - - - 0.744 - - Scm like with four mbt domains 2 [Source:HGNC Symbol;Acc:HGNC:20256]
47. DUSP12 ENSGALG00000007084 1477 0.743 - - - - - - - - 0.743 - dual specificity phosphatase 12 [Source:NCBI gene;Acc:425349]
48. HDAC1 ENSGALG00000003297 3528 0.742 - - - - - - 0.742 - - - histone deacetylase 1 [Source:NCBI gene;Acc:373961]
49. ATG2B ENSGALG00000042088 918 0.74 - - - - - - - - 0.740 - autophagy related 2B [Source:HGNC Symbol;Acc:HGNC:20187]
50. LYST ENSGALG00000032840 96 0.74 - - - - - - - 0.740 - - lysosomal trafficking regulator [Source:HGNC Symbol;Acc:HGNC:1968]
51. POMT1 ENSGALG00000003757 38 0.739 - - - - 0.739 - - - - - protein O-mannosyltransferase 1 [Source:NCBI gene;Acc:417175]
52. MSANTD4 ENSGALG00000017177 3306 0.738 - - - - - - 0.738 - - - Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
53. CLASP1 ENSGALG00000011645 1378 0.737 - - - - - - - 0.737 - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
54. ABHD17B ENSGALG00000015139 2805 0.737 - - - - - - - - 0.737 - abhydrolase domain containing 17B [Source:NCBI gene;Acc:427252]
55. BEND3 ENSGALG00000015314 2162 0.737 - - - - - - 0.737 - - - BEN domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23040]
56. TMEM130 ENSGALG00000003569 949 0.734 - - - - - - 0.734 - - - transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]
57. DUSP11 DUSP11 765 0.732 - - - - - - - 0.732 - -
58. SMTNL2 ENSGALG00000006069 827 0.731 - - - - - - 0.731 - - - smoothelin like 2 [Source:HGNC Symbol;Acc:HGNC:24764]
59. SIK2 ENSGALG00000036873 7 0.731 - - - - - - - 0.731 - - salt inducible kinase 2 [Source:HGNC Symbol;Acc:HGNC:21680]
60. PIH1D3 ENSGALG00000004870 1365 0.73 - - - - - - - 0.730 - - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
61. DYRK3 ENSGALG00000000863 375 0.729 - - - - - - - 0.729 - - dual specificity tyrosine phosphorylation regulated kinase 3 [Source:HGNC Symbol;Acc:HGNC:3094]
62. ZBBX ENSGALG00000028207 59 0.728 - - - - - - - 0.728 - - zinc finger B-box domain containing, transcript variant X5
63. CCDC71 ENSGALG00000006787 48 0.728 - - - - - - - 0.728 - - coiled-coil domain containing 71 [Source:HGNC Symbol;Acc:HGNC:25760]
64. VPS26B ENSGALG00000001521 1222 0.728 - - - - - - - - 0.728 - VPS26, retromer complex component B [Source:HGNC Symbol;Acc:HGNC:28119]
65. FBXO34 ENSGALG00000032563 656 0.726 - - - - - - - - 0.726 - F-box protein 34 [Source:NCBI gene;Acc:423554]
66. FBXO8 ENSGALG00000010764 147 0.725 - - - - - 0.725 - - - - F-box protein 8 [Source:NCBI gene;Acc:422565]
67. G6PC2 ENSGALG00000010899 260 0.725 - - - - - - - - 0.725 - glucose-6-phosphatase catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:28906]
68. CLK4 ENSGALG00000006057 2306 0.725 - - - - - - - 0.725 - - CDC like kinase 4 [Source:HGNC Symbol;Acc:HGNC:13659]
69. TOR1A ENSGALG00000004165 4487 0.724 - - - - - - 0.724 - - - torsin family 1 member A [Source:NCBI gene;Acc:417190]
70. IBTK ENSGALG00000015864 3154 0.724 - - - - - - - - 0.724 - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
71. KCNK2 ENSGALG00000009687 1552 0.724 - - - - - - 0.724 - - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
72. EPDR1 ENSGALG00000042063 1066 0.723 - - - - - - 0.723 - - - ependymin related 1
73. OSBPL11 ENSGALG00000012059 2523 0.723 - - - - - - - - 0.723 - oxysterol binding protein like 11 [Source:HGNC Symbol;Acc:HGNC:16397]
74. BRSK2 ENSGALG00000006681 158 0.722 - - - - - - - - 0.722 - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
75. TRIT1 ENSGALG00000003851 1518 0.721 - - - - - - 0.721 - - - tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]
76. UBXN7 ENSGALG00000006385 28 0.721 - - - - - - - 0.721 - - UBX domain protein 7 [Source:HGNC Symbol;Acc:HGNC:29119]
77. KIRREL 1906 0.721 - - - - - - - - 0.721 - kin of IRRE like (Drosophila)
78. KLHL42 ENSGALG00000017296 62 0.721 - - - - - - - 0.721 - - kelch like family member 42 [Source:HGNC Symbol;Acc:HGNC:29252]
79. NT5DC1 ENSGALG00000014964 1540 0.72 - - - - - - - - - 0.720 5'-nucleotidase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21556]
80. TPP1 52 0.72 - - - - - - - - 0.720 - tripeptidyl peptidase 1
81. KBP ENSGALG00000001172 3444 0.72 - - - - - - 0.720 - - - kainate binding protein [Source:NCBI gene;Acc:396300]
82. NKTR ENSGALG00000030268 3563 0.718 - - - - - - - 0.718 - - natural killer cell triggering receptor [Source:HGNC Symbol;Acc:HGNC:7833]
83. CLUAP1 ENSGALG00000030877 4269 0.718 - - - - - - 0.718 - - - clusterin associated protein 1 [Source:NCBI gene;Acc:426077]
84. PPP4R1 ENSGALG00000032092 1135 0.717 - - - - - - - - 0.717 - protein phosphatase 4 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:9320]
85. gga-mir-125b gga-mir-125b 146 0.717 - - - - - - - 0.717 - -
86. ASCC2 ENSGALG00000008059 3086 0.716 - - - - - - - 0.716 - - activating signal cointegrator 1 complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24103]
87. PERP PERP 734 0.716 - - - - - - 0.716 - - -
88. LCA5 ENSGALG00000015878 160 0.715 - - - - - - - 0.715 - - LCA5, lebercilin [Source:HGNC Symbol;Acc:HGNC:31923]
89. DMTF1 ENSGALG00000030844 3584 0.715 - - - - - - 0.715 - - - cyclin D binding myb like transcription factor 1 [Source:NCBI gene;Acc:418646]
90. KDELC2 ENSGALG00000017158 479 0.714 - - - - - - - - 0.714 - KDEL motif containing 2 [Source:HGNC Symbol;Acc:HGNC:28496]
91. C4H4ORF29 C4H4ORF29 2442 0.713 - - - - - - 0.713 - - -
92. LMNB1 ENSGALG00000014692 529 0.713 - - - - - - - - 0.713 - lamin B1 [Source:NCBI gene;Acc:396223]
93. PFN2 313 0.712 - - - - - - - 0.712 - - profilin 2, transcript variant X2
94. CCDC171 ENSGALG00000015103 349 0.712 - - - - - - - 0.712 - - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
95. PCDH12 ENSGALG00000002544 36 0.712 - - - - 0.712 - - - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
96. S1PR3 284 0.712 - - - - - - - - - 0.712 sphingosine-1-phosphate receptor 3
97. RBBP8NL ENSGALG00000045938 89 0.711 - - - - - 0.711 - - - - RBBP8 N-terminal like [Source:HGNC Symbol;Acc:HGNC:16144]
98. EPS15L1 ENSGALG00000021601 93 0.711 - - - - - - - 0.711 - - epidermal growth factor receptor pathway substrate 15 like 1 [Source:HGNC Symbol;Acc:HGNC:24634]
99. CCDC93 ENSGALG00000012129 2405 0.711 - - - - - - 0.711 - - - coiled-coil domain containing 93 [Source:NCBI gene;Acc:424277]
100. ARL16 49 0.711 - - - - - - - 0.711 - - ADP ribosylation factor like GTPase 16, transcript variant X1

There are 25 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA