Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CASC4

Gene Name Gene ID Reads Annotation
CASC4 ENSGALG00000008208 8338 cancer susceptibility 4 [Source:NCBI gene;Acc:415575]











Genes with expression patterns similar to CASC4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CASC4 ENSGALG00000008208 8338 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
2. FKBP9 ENSGALG00000037669 12079 1.939 - - - - - - 0.995 0.944 - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
3. HOXB3 ENSGALG00000043219 5198 0.999 - - - - - - 0.999 - - - homeobox B3 [Source:NCBI gene;Acc:395502]
4. NOP14 ENSGALG00000015649 7039 0.999 - - - - - - - 0.999 - - NOP14 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:16821]
5. POGZ ENSGALG00000036365 4056 0.999 - - - - - - 0.999 - - - pogo transposable element with ZNF domain, transcript variant X2
6. RARRES2 ENSGALG00000042642 3043 0.999 - - - - - - 0.999 - - - retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
7. SF3A1 ENSGALG00000007937 11716 0.999 - - - - - - 0.999 - - - splicing factor 3a subunit 1 [Source:NCBI gene;Acc:427717]
8. FAAH ENSGALG00000010433 3309 0.999 - - - - - - 0.999 - - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
9. SH2D3C ENSGALG00000005036 5101 0.999 - - - - - - 0.999 - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
10. C-MET C-MET 1650 0.999 - - - - - - 0.999 - - -
11. USP34 ENSGALG00000004455 6667 0.999 - - - - - - 0.999 - - - ubiquitin specific peptidase 34 [Source:NCBI gene;Acc:421193]
12. VPS41 ENSGALG00000031635 4391 0.999 - - - - - - 0.999 - - - VPS41, HOPS complex subunit [Source:NCBI gene;Acc:420762]
13. TRIM37 ENSGALG00000005084 4036 0.999 - - - - - - 0.999 - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
14. ZCCHC17 ENSGALG00000000618 5163 0.999 - - - - - - 0.999 - - - zinc finger CCHC-type containing 17 [Source:NCBI gene;Acc:404295]
15. CCDC47 ENSGALG00000000564 6584 0.998 - - - - - - 0.998 - - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
16. TLE4 TLE4 7278 0.998 - - - - - - 0.998 - - -
17. JMJD1C ENSGALG00000002942 4556 0.998 - - - - - - - 0.998 - - jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
18. LSM1 ENSGALG00000003245 4701 0.998 - - - - - - - 0.998 - - LSM1 homolog, mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:20472]
19. MBTPS1 ENSGALG00000003293 4843 0.998 - - - - - - - 0.998 - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
20. ORC2 ENSGALG00000008234 3361 0.998 - - - - - - - 0.998 - - origin recognition complex subunit 2 [Source:NCBI gene;Acc:424077]
21. SLC9A3R2 ENSGALG00000005608 4220 0.998 - - - - - - 0.998 - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
22. WDR33 ENSGALG00000002043 6340 0.998 - - - - - - 0.998 - - - WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
23. DISP1 3281 0.998 - - - - - - - 0.998 - - dispatched RND transporter family member 1, transcript variant X3
24. PRMT7 ENSGALG00000038865 2666 0.998 - - - - - - - 0.998 - - protein arginine methyltransferase 7 [Source:NCBI gene;Acc:415620]
25. GTF2I ENSGALG00000021665 6812 0.998 - - - - - - 0.998 - - - general transcription factor IIi [Source:HGNC Symbol;Acc:HGNC:4659]
26. EIF5B ENSGALG00000016764 30681 0.998 - - - - - - 0.998 - - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
27. TBC1D12 ENSGALG00000034044 5588 0.998 - - - - - - - 0.998 - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
28. MTMR6 ENSGALG00000017112 2214 0.998 - - - - - - - 0.998 - - myotubularin related protein 6 [Source:HGNC Symbol;Acc:HGNC:7453]
29. SAMM50 ENSGALG00000014194 20437 0.998 - - - - - - 0.998 - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
30. LARP1B ENSGALG00000010207 2935 0.998 - - - - - - - 0.998 - - La ribonucleoprotein domain family member 1B [Source:HGNC Symbol;Acc:HGNC:24704]
31. FAM206A ENSGALG00000019524 7170 0.998 - - - - - - 0.998 - - - family with sequence similarity 206 member A [Source:NCBI gene;Acc:420983]
32. Sep-11 Sep-11 2005 0.998 - - - - - - - 0.998 - -
33. FBXO5 ENSGALG00000013607 6156 0.998 - - - - - - - 0.998 - - F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
34. PSMG1 ENSGALG00000016062 7511 0.998 - - - - - - - 0.998 - - proteasome assembly chaperone 1 [Source:NCBI gene;Acc:418520]
35. ENGASE ENSGALG00000011816 1763 0.997 - - - - - - - 0.997 - - endo-beta-N-acetylglucosaminidase [Source:HGNC Symbol;Acc:HGNC:24622]
36. PPP1CB ENSGALG00000010026 6909 0.997 - - - - - - 0.997 - - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
37. GAS41 GAS41 9941 0.997 - - - - - - 0.997 - - -
38. GOLGA2 ENSGALG00000004881 677 0.997 - - - - - - - 0.997 - - golgin A2, transcript variant X7
39. BAG2 ENSGALG00000026605 3898 0.997 - - - - - - - 0.997 - - BCL2 associated athanogene 2
40. SSR1 ENSGALG00000012798 62626 0.997 - - - - - - 0.997 - - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
41. HIGD2A ENSGALG00000003348 34109 0.997 - - - - - - - 0.997 - - HIG1 hypoxia inducible domain family member 2A
42. STT3B ENSGALG00000011465 11939 0.997 - - - - - - 0.997 - - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
43. GPR89 GPR89 2253 0.997 - - - - - - - 0.997 - -
44. EXTL3 ENSGALG00000016630 1916 0.997 - - - - - - - 0.997 - - exostosin like glycosyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:3518]
45. SAFB ENSGALG00000013365 3175 0.997 - - - - - - - 0.997 - - scaffold attachment factor B, transcript variant X1
46. ADAM9 ENSGALG00000003398 1299 0.997 - - - - - - - 0.997 - - ADAM metallopeptidase domain 9 [Source:NCBI gene;Acc:426781]
47. RPTOR ENSGALG00000034210 982 0.997 - - - - - - - 0.997 - - regulatory associated protein of MTOR complex 1 [Source:HGNC Symbol;Acc:HGNC:30287]
48. DDX55 ENSGALG00000003298 2315 0.997 - - - - - - - 0.997 - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
49. CTPS1 ENSGALG00000042967 9532 0.996 - - - - - - - 0.996 - - CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]
50. CCNYL1 ENSGALG00000008485 11958 0.996 - - - - - - - 0.996 - - cyclin Y like 1
51. PCNA ENSGALG00000029292 19163 0.996 - - - - - - 0.996 - - - proliferating cell nuclear antigen [Source:NCBI gene;Acc:373984]
52. TMEM9B ENSGALG00000005908 14074 0.996 - - - - - - 0.996 - - - TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
53. PSMD5 ENSGALG00000001637 6812 0.995 - - - - - - - 0.995 - - proteasome 26S subunit, non-ATPase 5 [Source:NCBI gene;Acc:417125]
54. KDM2B ENSGALG00000004225 11513 0.994 - - - - - - - 0.994 - - lysine demethylase 2B [Source:HGNC Symbol;Acc:HGNC:13610]
55. TNRC18 ENSGALG00000040770 4061 0.994 - - - - - - - 0.994 - - trinucleotide repeat containing 18 [Source:HGNC Symbol;Acc:HGNC:11962]
56. BTG1 ENSGALG00000011276 17496 0.993 - - - - - - 0.993 - - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
57. NSF ENSGALG00000001055 7399 0.993 - - - - - - 0.993 - - - N-ethylmaleimide sensitive factor, vesicle fusing ATPase [Source:NCBI gene;Acc:419972]
58. BID ENSGALG00000013039 12427 0.993 - - - - - - 0.993 - - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
59. ESF1 ENSGALG00000034768 8610 0.993 - - - - - - - 0.993 - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]
60. NUDC ENSGALG00000000895 17844 0.992 - - - - - - - 0.992 - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
61. MTF2 ENSGALG00000043087 15225 0.992 - - - - - - 0.992 - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
62. PPP1R8 ENSGALG00000000729 11797 0.99 - - - - - - 0.990 - - - protein phosphatase 1 regulatory subunit 8 [Source:NCBI gene;Acc:419564]
63. DAK DAK 13208 0.989 - - - - - - - 0.989 - -
64. PARP16 ENSGALG00000007365 9467 0.989 - - - - - - - 0.989 - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
65. NAA15 ENSGALG00000009782 18563 0.989 - - - - - - 0.989 - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
66. GFPT1 ENSGALG00000036391 14025 0.988 - - - - - - 0.988 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
67. ACO1 ENSGALG00000002162 6645 0.985 - - - - - - - 0.985 - - aconitase 1, soluble [Source:NCBI gene;Acc:373916]
68. OLFML3 ENSGALG00000001956 28633 0.985 - - - - - - 0.985 - - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
69. FANCC ENSGALG00000012618 7002 0.985 - - - - - - 0.985 - - - FA complementation group C [Source:NCBI gene;Acc:427468]
70. STK3 ENSGALG00000032850 6339 0.984 - - - - - - 0.984 - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
71. LARS ENSGALG00000007494 13966 0.978 - - - - - - 0.978 - - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
72. LPHN2 LPHN2 16507 0.977 - - - - - - 0.977 - - -
73. MCM5 ENSGALG00000012546 18254 0.974 - - - - - - - 0.974 - - minichromosome maintenance complex component 5 [Source:NCBI gene;Acc:418058]
74. CDH5 ENSGALG00000032349 8526 0.973 - - - - - - - 0.973 - - cadherin 5 [Source:NCBI gene;Acc:374068]
75. NOL9 ENSGALG00000028958 23978 0.971 - - - - - - 0.971 - - - nucleolar protein 9 [Source:HGNC Symbol;Acc:HGNC:26265]
76. CTNND2 ENSGALG00000013001 11217 0.964 - - - - - - - 0.964 - - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
77. SRSF7 ENSGALG00000033120 43444 0.962 - - - - - - 0.962 - - - serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]
78. DTD1 ENSGALG00000008808 10807 0.956 - - - - - - - 0.956 - - D-tyrosyl-tRNA deacylase 1 [Source:NCBI gene;Acc:416726]
79. SRSF6 ENSGALG00000000990 12424 0.946 - - - - - - - 0.946 - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
80. TTC4 10377 0.945 - - - - - - - 0.945 - - tetratricopeptide repeat domain 4
81. THOC5 ENSGALG00000029223 16069 0.942 - - - - - - - 0.942 - - THO complex 5 [Source:NCBI gene;Acc:417019]
82. BCCIP ENSGALG00000006617 13291 0.941 - - - - - - - 0.941 - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
83. SKP2 ENSGALG00000003547 14637 0.94 - - - - - - - 0.940 - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
84. SH3BGRL3 ENSGALG00000038536 18187 0.938 - - - - - - - 0.938 - - SH3 domain binding glutamate rich protein like 3 [Source:NCBI gene;Acc:768795]
85. EIF2B1 ENSGALG00000003259 9491 0.936 - - - - - - - 0.936 - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
86. PKM ENSGALG00000001992 93960 0.935 - - - - - - 0.935 - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
87. TAF3 ENSGALG00000006731 15569 0.931 - - - - - - - 0.931 - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
88. ATP1A1 ENSGALG00000032247 15898 0.928 - - - - - - - 0.928 - - ATPase Na+/K+ transporting subunit alpha 1 [Source:NCBI gene;Acc:396530]
89. PARL ENSGALG00000002315 15943 0.926 - - - - - - - 0.926 - - presenilin associated rhomboid like
90. LSM7 ENSGALG00000000408 19112 0.923 - - - - - - - 0.923 - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]
91. SYNCRIP ENSGALG00000015830 30555 0.922 - - - - - - 0.922 - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
92. TM9SF3 ENSGALG00000005534 15290 0.92 - - - - - - - 0.920 - - transmembrane 9 superfamily member 3
93. ACTG1 ENSGALG00000001381 63905 0.917 - - - - - - 0.917 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
94. SPARC ENSGALG00000004184 36410 0.912 - - - - - - - 0.912 - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
95. HDAC2 ENSGALG00000014991 23458 0.91 - - - - - - - 0.910 - - histone deacetylase 2 [Source:NCBI gene;Acc:395635]
96. COPS5 ENSGALG00000030843 11942 0.897 - - - - - - - 0.897 - - COP9 signalosome subunit 5 [Source:NCBI gene;Acc:426579]
97. GNB2L1 ENSGALG00000000122 194871 0.89 - - - - - - 0.890 - - - receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
98. MPHOSPH10 ENSGALG00000003906 7029 0.888 - - - - - - - 0.888 - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
99. RNF7 ENSGALG00000021117 13110 0.888 - - - - - - - 0.888 - - ring finger protein 7 [Source:NCBI gene;Acc:424781]
100. SFSWAP ENSGALG00000002487 9977 0.88 - - - - - - 0.880 - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]

There are 34 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA