Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CASC1

Gene Name Gene ID Reads Annotation
CASC1 ENSGALG00000014030 64 cancer susceptibility candidate 1











Genes with expression patterns similar to CASC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CASC1 ENSGALG00000014030 64 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 cancer susceptibility candidate 1
2. PBK ENSGALG00000016582 50 1.447 - - 0.738 - - 0.709 - - - - PDZ binding kinase [Source:NCBI gene;Acc:422003]
3. ENSGALG00000019943 ENSGALG00000019943 6 0.807 - - 0.807 - - - - - - -
4. CDK6 ENSGALG00000009476 17 0.797 - - 0.797 - - - - - - - cyclin dependent kinase 6 [Source:NCBI gene;Acc:420558]
5. MX MX 45 0.77 - - - - - - - - - 0.770
6. SAP30BP ENSGALG00000002415 19 0.768 - - - - - - - - - 0.768 SAP30 binding protein [Source:HGNC Symbol;Acc:HGNC:30785]
7. TMEM170B ENSGALG00000012744 24 0.758 - - - - - - - - - 0.758 transmembrane protein 170B [Source:HGNC Symbol;Acc:HGNC:34244]
8. FAM122B ENSGALG00000006108 16 0.757 - - 0.757 - - - - - - - family with sequence similarity 122B [Source:HGNC Symbol;Acc:HGNC:30490]
9. C20H20ORF108 C20H20ORF108 49 0.741 - - - - - - - 0.741 - -
10. SH3PXD2A ENSGALG00000008293 243 0.738 - - - - 0.738 - - - - - SH3 and PX domains 2A [Source:HGNC Symbol;Acc:HGNC:23664]
11. ENSGALG00000027602 ENSGALG00000027602 20 0.731 - - 0.731 - - - - - - -
12. SKIV2L ENSGALG00000035499 45 0.722 - - - - - - - 0.722 - - Ski2 like RNA helicase [Source:HGNC Symbol;Acc:HGNC:10898]
13. SEZ6L ENSGALG00000032415 56 0.722 - - - - - - - 0.722 - - seizure related 6 homolog like [Source:HGNC Symbol;Acc:HGNC:10763]
14. MADCAM1 ENSGALG00000028341 6 0.722 - - - - - - - 0.722 - - mucosal vascular addressin cell adhesion molecule 1
15. ANO2 ENSGALG00000017271 4 0.722 - - - - - - - 0.722 - - anoctamin 2 [Source:HGNC Symbol;Acc:HGNC:1183]
16. SLC35F4 ENSGALG00000012094 30 0.722 - - - - - - - 0.722 - - solute carrier family 35 member F4 [Source:HGNC Symbol;Acc:HGNC:19845]
17. FREM1 ENSGALG00000005426 61 0.722 - - - - - - - 0.722 - - FRAS1 related extracellular matrix 1 [Source:HGNC Symbol;Acc:HGNC:23399]
18. GRHL2 ENSGALG00000037687 3 0.722 - - - - - - - 0.722 - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
19. LOC425001 ENSGALG00000009468 7 0.722 - - - - - - - 0.722 - - uncharacterized LOC425001, transcript variant X2
20. TBXAS1 ENSGALG00000012791 2 0.722 - - - - - - - 0.722 - - thromboxane A synthase 1 [Source:HGNC Symbol;Acc:HGNC:11609]
21. TTC39B ENSGALG00000005416 12 0.722 - - - - - - - 0.722 - - tetratricopeptide repeat domain 39B [Source:HGNC Symbol;Acc:HGNC:23704]
22. PEPCK PEPCK 1 0.722 - - - - - - - 0.722 - -
23. CD8B ENSGALG00000015902 3 0.722 - - - - - - - 0.722 - - CD8b molecule [Source:NCBI gene;Acc:396175]
24. KIAA1841 ENSGALG00000007825 22 0.722 - - - - - - - 0.722 - - KIAA1841 [Source:NCBI gene;Acc:421196]
25. CLDN3 ENSGALG00000022557 189 0.722 - - - - - - - 0.722 - - claudin 3 [Source:NCBI gene;Acc:374029]
26. FAM73A FAM73A 7 0.722 - - - - - - - 0.722 - -
27. C1ORF95 C1ORF95 0 0.722 - - - - - - - 0.722 - -
28. GPR34 ENSGALG00000016227 9 0.722 - - - - - - - 0.722 - - G protein-coupled receptor 34 [Source:NCBI gene;Acc:771199]
29. BST1 ENSGALG00000014509 12 0.722 - - - - - - - 0.722 - - bone marrow stromal cell antigen 1 [Source:NCBI gene;Acc:422828]
30. ANPEP ENSGALG00000027501 234 0.722 - - - - - - - 0.722 - - alanyl aminopeptidase, membrane [Source:NCBI gene;Acc:395667]
31. MAP3K15 ENSGALG00000016426 1 0.722 - - - - - - - 0.722 - - mitogen-activated protein kinase kinase kinase 15 [Source:HGNC Symbol;Acc:HGNC:31689]
32. CTSE ENSGALG00000000786 1 0.722 - - - - - - - 0.722 - - cathepsin E [Source:HGNC Symbol;Acc:HGNC:2530]
33. CASKIN2 ENSGALG00000008034 3 0.722 - - - - - - - 0.722 - - CASK interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:18200]
34. ICK ENSGALG00000016321 19 0.722 - - - - - - - 0.722 - - intestinal cell kinase [Source:HGNC Symbol;Acc:HGNC:21219]
35. CCKBR ENSGALG00000039837 23 0.722 - - - - - - - 0.722 - - cholecystokinin B receptor [Source:NCBI gene;Acc:414885]
36. TRAPPC9 ENSGALG00000042766 10 0.722 - - - - - - - 0.722 - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
37. SERHL2 ENSGALG00000011867 2 0.722 - - - - - - - 0.722 - - serine hydrolase like 2 [Source:NCBI gene;Acc:417976]
38. FAM237A ENSGALG00000020836 21 0.722 - - - - - - - 0.722 - - family with sequence similarity 237 member A [Source:HGNC Symbol;Acc:HGNC:52388]
39. PRPF19 ENSGALG00000040048 168 0.722 - - - - - - - 0.722 - - pre-mRNA processing factor 19 [Source:NCBI gene;Acc:430767]
40. PAQR7 ENSGALG00000009680 10 0.722 - - - - - - - 0.722 - - progestin and adipoQ receptor family member 7 [Source:NCBI gene;Acc:425505]
41. MCF2L2 ENSGALG00000008744 8 0.722 - - - - - - - 0.722 - - MCF.2 cell line derived transforming sequence-like 2 [Source:HGNC Symbol;Acc:HGNC:30319]
42. SMYD3 ENSGALG00000010653 14 0.722 - - - - - - - 0.722 - - SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
43. STON1 ENSGALG00000009092 49 0.722 - - - - - - - 0.722 - - stonin 1 [Source:NCBI gene;Acc:100534590]
44. CRYBG3 7 0.722 - - - - - - - 0.722 - - crystallin beta-gamma domain containing 3, transcript variant X2
45. CACNA1D ENSGALG00000005332 34 0.722 - - - - - - - 0.722 - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]
46. C1orf43 C1orf43 100 0.722 - - - - - - - 0.722 - -
47. KIAA1024L ENSGALG00000027692 20 0.722 - - - - - - - 0.722 - - KIAA1024 like [Source:HGNC Symbol;Acc:HGNC:33914]
48. AMBP ENSGALG00000030255 18 0.722 - - - - - - - 0.722 - - alpha-1-microglobulin/bikunin precursor [Source:NCBI gene;Acc:770795]
49. MTHFD2L ENSGALG00000010855 14 0.722 - - - - - - - 0.722 - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:HGNC Symbol;Acc:HGNC:31865]
50. MDGA1 ENSGALG00000010145 13 0.722 - - - - - - - 0.722 - - MAM domain containing glycosylphosphatidylinositol anchor 1 [Source:NCBI gene;Acc:421431]
51. GNRH1 9 0.722 - - - - - - - 0.722 - - gonadotropin releasing hormone 1
52. SVOP ENSGALG00000034278 27 0.722 - - - - - - - 0.722 - - SV2 related protein [Source:HGNC Symbol;Acc:HGNC:25417]
53. EDRF1 26 0.722 - - - - - - - 0.722 - - erythroid differentiation regulatory factor 1
54. MC5R ENSGALG00000032087 2 0.722 - - - - - - - 0.722 - - melanocortin 5 receptor [Source:NCBI gene;Acc:421047]
55. ZAP70 ENSGALG00000001486 2 0.722 - - - - - - - 0.722 - - Gallus gallus zeta-chain (TCR) associated protein kinase 70kDa (ZAP70), mRNA. [Source:RefSeq mRNA;Acc:NM_001321556]
56. FES ENSGALG00000008340 223 0.722 - - - - - - - 0.722 - - FES proto-oncogene, tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3657]
57. PRKG2 ENSGALG00000010909 1 0.722 - - - - - - - 0.722 - - protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
58. CDH23 ENSGALG00000004653, ENSGALG00000036824 2 0.722 - - - - - - - 0.722 - - cadherin related 23, transcript variant X17
59. LECT2 ENSGALG00000006323 60 0.722 - - - - - - - 0.722 - - leukocyte cell derived chemotaxin 2 [Source:NCBI gene;Acc:396471]
60. ABCA9 ENSGALG00000021395 5 0.722 - - - - - - - 0.722 - - ATP binding cassette subfamily A member 9
61. NFYA ENSGALG00000003247 1894 0.721 - - - - - 0.721 - - - - nuclear transcription factor Y subunit alpha [Source:NCBI gene;Acc:419917]
62. NDFIP2 ENSGALG00000016909 25 0.72 - - - - - - - 0.720 - - Nedd4 family interacting protein 2 [Source:NCBI gene;Acc:418803]
63. AP3B1 ENSGALG00000004390 387 0.72 - - - - - - - 0.720 - - adaptor related protein complex 3 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:566]
64. HGFAC ENSGALG00000015623 1 0.718 - - - - - - - 0.718 - - HGF activator [Source:HGNC Symbol;Acc:HGNC:4894]
65. CR1L ENSGALG00000023950 98 0.717 - - - - - - - - - 0.717 complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
66. MOB3C ENSGALG00000025946 164 0.714 - - - - - - 0.714 - - - MOB kinase activator 3C [Source:HGNC Symbol;Acc:HGNC:29800]
67. TPCN1 ENSGALG00000008357 28 0.709 - - - - - - - 0.709 - - two pore segment channel 1 [Source:HGNC Symbol;Acc:HGNC:18182]
68. ENSGALG00000022901 ENSGALG00000022901 19 0.709 - - - - - - - 0.709 - -
69. RQCD1 RQCD1 110 0.709 - - - - - - - 0.709 - -
70. ZNF512B ENSGALG00000006013 100 0.709 - - - - - - - 0.709 - - zinc finger protein 512B [Source:NCBI gene;Acc:771616]
71. RTKN2 ENSGALG00000002980 50 0.709 - - - - - - - 0.709 - - rhotekin 2 [Source:NCBI gene;Acc:423660]
72. MYO10L ENSGALG00000011172 80 0.709 - - - - - - - 0.709 - - myosin-X-like, transcript variant X2
73. CD28 ENSGALG00000008669 2 0.709 - - - - - - - 0.709 - - CD28 molecule [Source:NCBI gene;Acc:396249]
74. CCNI2 ENSGALG00000023812 21 0.709 - - - - - - - 0.709 - - cyclin I family member 2, transcript variant X2
75. NUDT2 ENSGALG00000027295 15 0.708 - - 0.708 - - - - - - - nudix hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8049]
76. IGHMBP2 ENSGALG00000004328 118 0.707 - - - - - 0.707 - - - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
77. PRKCE ENSGALG00000010000 99 0.707 - - - - - - - - - 0.707 protein kinase C epsilon, transcript variant X1
78. MICAL2 ENSGALG00000005540 25 0.706 - - - - - - - - - 0.706 microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24693]
79. STOML1 ENSGALG00000001470 472 0.705 - - - - - - 0.705 - - - stomatin like 1 [Source:NCBI gene;Acc:415303]
80. HN1L HN1L 247 0.701 - - - - - - - - - 0.701
81. SH2D4A ENSGALG00000010122 206 0.701 - - - - - - - - - 0.701 SH2 domain containing 4A [Source:HGNC Symbol;Acc:HGNC:26102]
82. OVST_1 ENSGALG00000011930 9 0.7 - - - - - - - 0.700 - - ovostatin [Source:NCBI gene;Acc:396151]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA