Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CARKD

Gene Name Gene ID Reads Annotation
CARKD CARKD 2914











Genes with expression patterns similar to CARKD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CARKD CARKD 2914 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ENSGALG00000010034 ENSGALG00000010034 3293 1.849 - - - - - 0.850 - 0.999 - -
3. NPFF1 NPFF1 3177 1.725 - - - - - - - 0.999 - 0.726
4. CHMP5 ENSGALG00000013160 13347 1.716 - - - - - - - 0.997 0.719 - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
5. BSDC1 ENSGALG00000003405 3701 1.682 - - - - - - - 0.963 0.719 - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
6. LEMD3 ENSGALG00000009873 347 1.676 - - - - - 0.838 - - 0.838 - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
7. PIK3IP1 ENSGALG00000006942 8388 1.64 - - - - - - - 0.853 0.787 - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
8. CLP1 ENSGALG00000007370 2047 1.626 - - - - - 0.713 - - 0.913 - cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:423131]
9. EIF3E ENSGALG00000037067 36561 1.546 - - - - - 0.716 - 0.830 - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
10. CCDC47 ENSGALG00000000564 6584 1.449 - - - - - 0.711 - - - 0.738 coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
11. CLNS1A ENSGALG00000008574 25675 1.435 - - - - - - 0.723 0.712 - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
12. SCLT1 2397 1 - - - - - - - 1.000 - - sodium channel and clathrin linker 1, transcript variant X6
13. KIAA0895L 1739 1 - - - - - - - 1.000 - - KIAA0895 like, transcript variant X4
14. GGA3 ENSGALG00000007992 3566 1 - - - - - - - 1.000 - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
15. MADD ENSGALG00000008181 2273 1 - - - - - - - 1.000 - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
16. FXN ENSGALG00000015108 1867 1 - - - - - - - 1.000 - - frataxin [Source:HGNC Symbol;Acc:HGNC:3951]
17. RNF113A ENSGALG00000000538 3985 0.999 - - - - - - - 0.999 - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
18. YTHDC2 2266 0.999 - - - - - - - 0.999 - - YTH domain containing 2, transcript variant X3
19. HBXIP HBXIP 8637 0.999 - - - - - - - 0.999 - -
20. FAM125B FAM125B 2953 0.999 - - - - - - - 0.999 - -
21. RRN3 ENSGALG00000041989 3934 0.999 - - - - - - - 0.999 - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
22. UBALD1 ENSGALG00000007619 8536 0.999 - - - - - - - 0.999 - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
23. PDCD2L 4843 0.999 - - - - - - - 0.999 - - programmed cell death 2-like
24. JKAMP ENSGALG00000012009 5781 0.999 - - - - - - - 0.999 - - JNK1/MAPK8-associated membrane protein [Source:NCBI gene;Acc:423530]
25. ATL1 ENSGALG00000012339 3789 0.998 - - - - - - - 0.998 - - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
26. TMTC2 ENSGALG00000010975 7040 0.998 - - - - - - - 0.998 - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
27. EIF3D ENSGALG00000012529 40887 0.997 - - - - - - - 0.997 - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
28. RIC8A ENSGALG00000004191 6094 0.997 - - - - - - - 0.997 - - RIC8 guanine nucleotide exchange factor A [Source:NCBI gene;Acc:422987]
29. DDX24 ENSGALG00000010884 5485 0.997 - - - - - - - 0.997 - - DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]
30. RBFA ENSGALG00000036067 6542 0.997 - - - - - - - 0.997 - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
31. PGM1 ENSGALG00000011016 3391 0.997 - - - - - - - 0.997 - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
32. CHTOP ENSGALG00000042129 24112 0.991 - - - - - - - 0.991 - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
33. CASP3 ENSGALG00000010638 11572 0.99 - - - - - - - 0.990 - - caspase 3 [Source:NCBI gene;Acc:395476]
34. NECAP1 ENSGALG00000037656 5181 0.989 - - - - - - - 0.989 - - NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
35. ARHGAP11A ENSGALG00000009731 6817 0.989 - - - - - - - 0.989 - - Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
36. MMADHC ENSGALG00000012473 9026 0.987 - - - - - - - 0.987 - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
37. NDUFA2 ENSGALG00000040626 27899 0.977 - - - - - - - 0.977 - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
38. MRPS17 ENSGALG00000002379 30243 0.973 - - - - - - - 0.973 - - mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
39. NOC4L ENSGALG00000002272 9644 0.97 - - - - - - - 0.970 - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
40. SQLE ENSGALG00000036915 4172 0.969 - - - - - - - 0.969 - - squalene epoxidase [Source:NCBI gene;Acc:420335]
41. PRKG1 ENSGALG00000003805 4654 0.967 - - - - - - - 0.967 - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
42. SMC3 ENSGALG00000008585 16618 0.966 - - - - - - - 0.966 - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
43. CENPP ENSGALG00000004687 6707 0.956 - - - - - - - 0.956 - - centromere protein P [Source:NCBI gene;Acc:415952]
44. GCLM ENSGALG00000005782 15789 0.955 - - - - - - - 0.955 - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
45. COL4A6 ENSGALG00000008266 6374 0.933 - - - - - - - 0.933 - - collagen type IV alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:2208]
46. ALYREF ENSGALG00000007237 48479 0.932 - - - - - - - 0.932 - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
47. NIPAL4 ENSGALG00000039687 29 0.931 - - - - - 0.931 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
48. MCC ENSGALG00000000208 61 0.931 - - - - - 0.931 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
49. SH2D1B ENSGALG00000028448 17 0.93 - - - - - 0.930 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
50. HJURP ENSGALG00000015363 54 0.929 - - - - - 0.929 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
51. BLVRA ENSGALG00000031786 23 0.929 - - - - - 0.929 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
52. KIF7 ENSGALG00000006611 33 0.929 - - - - - 0.929 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
53. RAC3 ENSGALG00000040606 355 0.928 - - - - - 0.928 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
54. GPD1L2 ENSGALG00000012061 31 0.928 - - - - - 0.928 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
55. OLFML1 ENSGALG00000027184 19 0.927 - - - - - 0.927 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
56. ENSGALG00000002946 ENSGALG00000002946 56 0.927 - - - - - 0.927 - - - -
57. LOC419851 ENSGALG00000023953 80 0.926 - - - - - 0.926 - - - - complement component 4 binding protein, alpha chain
58. VPS33A ENSGALG00000004440 2030 0.925 - - - - - - - - 0.925 - VPS33A, CORVET/HOPS core subunit, transcript variant X1
59. TPCN3 ENSGALG00000008198 124 0.923 - - - - - 0.923 - - - - two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
60. DRD4 ENSGALG00000040761 79 0.922 - - - - - 0.922 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
61. WHAMM ENSGALG00000006002 1678 0.922 - - - - - 0.922 - - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
62. CLASP1 ENSGALG00000011645 1378 0.919 - - - - - 0.919 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
63. C1orf168 C1orf168 98 0.917 - - - - - 0.917 - - - -
64. PACSIN2 ENSGALG00000014159 601 0.914 - - - - - 0.914 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
65. PRKDC ENSGALG00000042469 449 0.914 - - - - - 0.914 - - - - protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]
66. ELMSAN1 ENSGALG00000009282 79 0.912 - - - - - 0.912 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
67. GGA.16412 GGA.16412 846 0.911 - - - - - - - - 0.911 -
68. AQP1 ENSGALG00000005209 111 0.911 - - - - - 0.911 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
69. GTF3C4 ENSGALG00000031016 1221 0.909 - - - - - 0.909 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
70. ADNP2 ENSGALG00000035669 318 0.909 - - - - - 0.909 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
71. ACN9 ACN9 269 0.907 - - - - - 0.907 - - - -
72. JAKMIP2 ENSGALG00000007593 95 0.907 - - - - - 0.907 - - - - janus kinase and microtubule interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29067]
73. SCAF8 ENSGALG00000013635 421 0.906 - - - - - 0.906 - - - - SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
74. LTC4SL ENSGALG00000011450 645 0.906 - - - - - 0.906 - - - - leukotriene C4 synthase-like, transcript variant X3
75. TTC7A ENSGALG00000010020 793 0.905 - - - - - 0.905 - - - - tetratricopeptide repeat domain 7A [Source:NCBI gene;Acc:421414]
76. DIAPH3 ENSGALG00000016937 1069 0.905 - - - - - 0.905 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
77. ATG10 ENSGALG00000027714 1100 0.903 - - - - - 0.903 - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
78. COBL ENSGALG00000013102 84 0.902 - - - - - 0.902 - - - - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
79. UTP11L UTP11L 11927 0.902 - - - - - - - 0.902 - -
80. NCF1 ENSGALG00000001189 334 0.902 - - - - - - - - 0.902 - neutrophil cytosolic factor 1 [Source:NCBI gene;Acc:417485]
81. GOLGA1 ENSGALG00000001025 334 0.901 - - - - - 0.901 - - - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
82. ENSGALG00000026461 ENSGALG00000026461 61 0.899 - - - - - 0.899 - - - -
83. SMOC2 ENSGALG00000011205 340 0.897 - - - - - 0.897 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
84. DSEL ENSGALG00000042505 92 0.894 - - - - - 0.894 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
85. AHSA2 1504 0.89 - - - - - - - - 0.890 - AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
86. NUDT6 ENSGALG00000011834 1309 0.89 - - - - - - - - 0.890 - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
87. PPIP5K2 ENSGALG00000015264 862 0.89 - - - - - - - - 0.890 - diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:29035]
88. GYPC ENSGALG00000011566 99 0.889 - - - - - 0.889 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
89. POLB ENSGALG00000040828 7462 0.889 - - - - - 0.889 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
90. ACL ACL 1813 0.889 - - - - - - - - 0.889 -
91. SLC7A6OS ENSGALG00000035575 2878 0.889 - - - - - - - - 0.889 - solute carrier family 7 member 6 opposite strand [Source:NCBI gene;Acc:415621]
92. TERF1 ENSGALG00000037453 4497 0.887 - - - - - 0.887 - - - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
93. PON2 ENSGALG00000009689 1416 0.887 - - - - - 0.887 - - - - paraoxonase 2 [Source:NCBI gene;Acc:395830]
94. CEP70 ENSGALG00000012087 7992 0.887 - - - - - - - - 0.887 - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
95. FAM221A ENSGALG00000010977 695 0.886 - - - - - - - - 0.886 - family with sequence similarity 221 member A [Source:HGNC Symbol;Acc:HGNC:27977]
96. HMGN2 HMGN2 158543 0.884 - - - - - - - 0.884 - -
97. ALS2 ENSGALG00000008415 2576 0.884 - - - - - - - - 0.884 - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
98. ENSGALG00000019710 ENSGALG00000019710 212 0.884 - - - - - - - - 0.884 -
99. KLHL40 ENSGALG00000005292 61 0.884 - - - - - 0.884 - - - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
100. DLG3 ENSGALG00000041900 3016 0.884 - - - - - - - - 0.884 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]

There are 435 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA