Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CARF

Gene Name Gene ID Reads Annotation
CARF ENSGALG00000008474 6 calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]











Genes with expression patterns similar to CARF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CARF ENSGALG00000008474 6 5 - - 1.000 1.000 - 1.000 1.000 - - 1.000 calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
2. SEMA4G ENSGALG00000026957 11 1.837 - - - 0.837 - - 1.000 - - - semaphorin 4G [Source:HGNC Symbol;Acc:HGNC:10735]
3. EPAS1 ENSGALG00000010005 14 1.691 - - 0.885 - - - - - - 0.806 endothelial PAS domain protein 1 [Source:NCBI gene;Acc:395596]
4. TRPC3 ENSGALG00000011875 9 1.573 - - 0.812 - - 0.761 - - - - transient receptor potential cation channel subfamily C member 3 [Source:NCBI gene;Acc:374153]
5. IRF2BP2 ENSGALG00000010996 11 1.508 - - 0.702 - - - - - - 0.806 interferon regulatory factor 2 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21729]
6. SCN3B ENSGALG00000006490 48 1 - - - - - - 1.000 - - - sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]
7. F-KER ENSGALG00000028706 0 1 - - - - - 1.000 - - - - feather keratin I [Source:NCBI gene;Acc:769269]
8. PPP1R12B ENSGALG00000000336 16 1 - - - - - 1.000 - - - - protein phosphatase 1 regulatory subunit 12B [Source:NCBI gene;Acc:395478]
9. ARHGEF17 6 1 - - - - - 1.000 - - - - Rho guanine nucleotide exchange factor 17
10. PPP1R1B ENSGALG00000044406 6 1 - - - - - 1.000 - - - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
11. WNK1 ENSGALG00000012992 67 1 - - - - - - 1.000 - - - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]
12. PAX5 ENSGALG00000016431 1 1 - - - - - - 1.000 - - - paired box 5 [Source:NCBI gene;Acc:387330]
13. VSTM2A ENSGALG00000041764 2 1 - - - - - 1.000 - - - - V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
14. MUC13 7 1 - - - - - - - - - 1.000 mucin 13, cell surface associated, transcript variant X10
15. ZNRF2 ENSGALG00000031163 0 1 - - - - - 1.000 - - - - zinc and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:22316]
16. PLD5 ENSGALG00000010737 5 1 - - - - - 1.000 - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
17. SLC26A4 ENSGALG00000007998 2 1 - - - - - - 1.000 - - - solute carrier family 26 member 4 [Source:HGNC Symbol;Acc:HGNC:8818]
18. uc_6 uc_6 14 1 - - - - - - - - - 1.000
19. SLC5A7 ENSGALG00000016804 93 1 - - - - - - 1.000 - - - solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
20. EHF ENSGALG00000007817 11 1 - - - - - - - - - 1.000 ETS homologous factor [Source:NCBI gene;Acc:425791]
21. STX3 ENSGALG00000035153 1 1 - - - - - 1.000 - - - - syntaxin 3
22. ENSGALG00000021682 ENSGALG00000021682 0 1 - - - - - 1.000 - - - -
23. C9orf3 C9orf3 47 1 - - - - - - 1.000 - - -
24. PSTPIP1 ENSGALG00000002786 9 1 - - - - - 1.000 - - - - proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
25. SP-A SP-A 9 1 - - - - - 1.000 - - - -
26. FAM160A2 ENSGALG00000003416 23 1 - - - - - 1.000 - - - - family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
27. C1H7ORF60 C1H7ORF60 3 1 - - - - - 1.000 - - - -
28. THRA ENSGALG00000040017 3 1 - - - - - - - - - 1.000 Gallus gallus thyroid hormone receptor, alpha (THRA), mRNA. [Source:RefSeq mRNA;Acc:NM_205313]
29. PITPNC1L ENSGALG00000002610 3 1 - - - - - 1.000 - - - - phosphatidylinositol transfer protein, cytoplasmic 1-like, transcript variant X2
30. CFAP99 ENSGALG00000015685 32 1 - - - - - - 1.000 - - - cilia and flagella associated protein 99 [Source:HGNC Symbol;Acc:HGNC:51180]
31. MFSD6 ENSGALG00000041884 1 1 - - - - - 1.000 - - - - major facilitator superfamily domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24711]
32. ENSGALG00000013079 ENSGALG00000013079 12 1 - - - - - 1.000 - - - -
33. PRKG2 ENSGALG00000010909 1 1 - - - - - 1.000 - - - - protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
34. EPB42 ENSGALG00000021230 20 1 - - - - - - 1.000 - - - Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA. [Source:RefSeq mRNA;Acc:NM_001321559]
35. SEC16A ENSGALG00000002364 19 1 - - - - - 1.000 - - - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
36. SIX4 ENSGALG00000017389 10 1 - - - - - - 1.000 - - - SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]
37. RHBDF2 ENSGALG00000001943 1 1 - - - - - 1.000 - - - - rhomboid 5 homolog 2 [Source:HGNC Symbol;Acc:HGNC:20788]
38. PTPN3 ENSGALG00000022909 6 1 - - - - - 1.000 - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
39. TMEM163 ENSGALG00000012190 72 1 - - - - - 1.000 - - - - transmembrane protein 163 [Source:HGNC Symbol;Acc:HGNC:25380]
40. SCN1A ENSGALG00000010943 6 1 - - - - - - 1.000 - - - sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]
41. ENSGALG00000008309 ENSGALG00000008309 7 1 - - 1.000 - - - - - - -
42. GBE ENSGALG00000011859, ENSGALG00000028016 2 1 - - - - - 1.000 - - - - eye-globin, transcript variant X3
43. AFTPH ENSGALG00000008828 21 1 - - - - - 1.000 - - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
44. SHROOM3 35 1 - - - - - - 1.000 - - - shroom family member 3, transcript variant X1
45. SNX8 ENSGALG00000004255 4 1 - - - - - 1.000 - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
46. TBX15 0 1 - - - - - 1.000 - - - - T-box 15
47. MFSD11 ENSGALG00000001777 8 1 - - - - - 1.000 - - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
48. SLC26A6 ENSGALG00000026089 3 1 - - - - - 1.000 - - - - solute carrier family 26 member 6 [Source:NCBI gene;Acc:416012]
49. OLAH ENSGALG00000043833 3 1 - - - - - - 1.000 - - - oleoyl-ACP hydrolase [Source:HGNC Symbol;Acc:HGNC:25625]
50. ERI3 ENSGALG00000010106 995 1 - - - - - 1.000 - - - - ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
51. AATK ENSGALG00000006901 1 1 - - - - - 1.000 - - - - apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
52. TRIM25 ENSGALG00000003144 12 1 - - - - - 1.000 - - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
53. CNP1 ENSGALG00000028638 56 1 - - - - - - 1.000 - - - C-type natriuretic peptide 1 [Source:NCBI gene;Acc:100499455]
54. UBXN6 ENSGALG00000001146 122 1 - - - - - - 1.000 - - - UBX domain protein 6 [Source:HGNC Symbol;Acc:HGNC:14928]
55. C17orf105 C17orf105 11 1 - - - - - 1.000 - - - -
56. FKHR FKHR 1 1 - - - - - 1.000 - - - -
57. SOD3 ENSGALG00000018557 16 1 - - - - - 1.000 - - - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
58. GAMT ENSGALG00000040182 5 1 - - - - - 1.000 - - - - guanidinoacetate N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4136]
59. gga-mir-10a ENSGALG00000021952 4 1 - - - - - 1.000 - - - - gga-mir-10a [Source:miRBase;Acc:MI0007559]
60. WWTR1 ENSGALG00000010412 5 1 - - - - - - 1.000 - - - WW domain containing transcription regulator 1 [Source:HGNC Symbol;Acc:HGNC:24042]
61. CCDC69 2 1 - - - - - - - - - 1.000 coiled-coil domain containing 69
62. PABPN1L ENSGALG00000006242 3 1 - - - - - 1.000 - - - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
63. VENTX VENTX 50 1 - - - - - - 1.000 - - -
64. TYRP1 ENSGALG00000015205 4 1 - - - - - - 1.000 - - - tyrosinase related protein 1 [Source:NCBI gene;Acc:395913]
65. ENSGALG00000028222 ENSGALG00000028222 44 1 - - - - - - 1.000 - - -
66. WFDC2 ENSGALG00000031164 37 1 - - - - - 1.000 - - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
67. RNF217 ENSGALG00000013651 1 1 - - - - - 1.000 - - - - ring finger protein 217 [Source:HGNC Symbol;Acc:HGNC:21487]
68. WDR41 ENSGALG00000004350 16 1 - - - - - 1.000 - - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
69. LMLN ENSGALG00000012067 15 1 - - - - - - 1.000 - - - leishmanolysin like peptidase [Source:HGNC Symbol;Acc:HGNC:15991]
70. TMEM189 ENSGALG00000026906 14 1 - - - - - 1.000 - - - - transmembrane protein 189 [Source:NCBI gene;Acc:100538348]
71. LDB1 ENSGALG00000007641 2 1 - - - - - 1.000 - - - - LIM domain binding 1 [Source:NCBI gene;Acc:395952]
72. NME4 ENSGALG00000002688 1 1 - - - - - 1.000 - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:NCBI gene;Acc:395915]
73. PPM1F ENSGALG00000039121 26 1 - - - - - 1.000 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
74. KATNAL2 ENSGALG00000041882 1 1 - - - - - 1.000 - - - - katanin catalytic subunit A1 like 2 [Source:HGNC Symbol;Acc:HGNC:25387]
75. MADCAM1 ENSGALG00000028341 6 1 - - - - - - - - - 1.000 mucosal vascular addressin cell adhesion molecule 1
76. AK4 ENSGALG00000011035 9 1 - - - - - 1.000 - - - - adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
77. MNOC MNOC 1 1 - - - - - 1.000 - - - -
78. STRA8 ENSGALG00000011722 4 1 - - - - - 1.000 - - - - stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
79. VPS37D 3 1 - - - - - 1.000 - - - - VPS37D, ESCRT-I subunit
80. DNMBP ENSGALG00000007304 4 1 - - - - - 1.000 - - - - dynamin binding protein
81. ZNF143 ENSGALG00000005787 345 1 - - - - - - 1.000 - - - zinc finger protein 143 [Source:HGNC Symbol;Acc:HGNC:12928]
82. MINPP1 ENSGALG00000003695 1 1 - - - - - 1.000 - - - - multiple inositol-polyphosphate phosphatase 1 [Source:NCBI gene;Acc:395356]
83. ASMT ENSGALG00000016685 3 1 - - - - - - 1.000 - - - acetylserotonin O-methyltransferase [Source:NCBI gene;Acc:396286]
84. CBL ENSGALG00000029077 6 1 - - - - - 1.000 - - - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
85. GTF3C3 ENSGALG00000007958 6 1 - - - - - 1.000 - - - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
86. SEPT12 ENSGALG00000029027 611 1 - - - - - - 1.000 - - - septin 12 [Source:HGNC Symbol;Acc:HGNC:26348]
87. CORO6 ENSGALG00000028949 21 1 - - - - - 1.000 - - - - coronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]
88. RPS6KA2 ENSGALG00000011473 2 1 - - - - - 1.000 - - - - ribosomal protein S6 kinase A2 [Source:HGNC Symbol;Acc:HGNC:10431]
89. MAGI1 ENSGALG00000007431 23 1 - - - - - 1.000 - - - - membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:946]
90. BAFF BAFF 40 1 - - - - - 1.000 - - - -
91. HID1 ENSGALG00000007808 2 1 - - - - - 1.000 - - - - HID1 domain containing [Source:HGNC Symbol;Acc:HGNC:15736]
92. ENSGALG00000028116 ENSGALG00000028116 0 1 - - - - - 1.000 - - - -
93. FARP2 ENSGALG00000005788 6 1 - - - - - 1.000 - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
94. HECA ENSGALG00000013824 14 1 - - - - - - 1.000 - - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
95. ARHGEF37 ENSGALG00000039652 28 1 - - - - - - - - - 1.000 Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
96. SNORA24 SNORA24 2 1 - - - - - 1.000 - - - -
97. RASA4 ENSGALG00000001876 178 1 - - - - - - 1.000 - - - RAS p21 protein activator 4 [Source:NCBI gene;Acc:417513]
98. ENSGALG00000027164 ENSGALG00000027164 8 1 - - - - - - 1.000 - - -
99. DNAJC28 ENSGALG00000037414 6 1 - - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C28 [Source:HGNC Symbol;Acc:HGNC:1297]
100. RASAL2 ENSGALG00000004323 55 1 - - - - - - 1.000 - - - RAS protein activator like 2 [Source:HGNC Symbol;Acc:HGNC:9874]

There are 230 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA