Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CAPRIN1

Gene Name Gene ID Reads Annotation
CAPRIN1 ENSGALG00000013532 1699 cell cycle associated protein 1 [Source:NCBI gene;Acc:426151]











Genes with expression patterns similar to CAPRIN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CAPRIN1 ENSGALG00000013532 1699 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cell cycle associated protein 1 [Source:NCBI gene;Acc:426151]
2. SCN9A ENSGALG00000027793 161 1.574 - - - - - - 0.800 - - 0.774 sodium voltage-gated channel alpha subunit 9 [Source:NCBI gene;Acc:395946]
3. CPE ENSGALG00000027788 153 0.869 - - - - - - 0.869 - - - carboxypeptidase E [Source:HGNC Symbol;Acc:HGNC:2303]
4. DHX35 ENSGALG00000003658 1090 0.869 - - - - - - 0.869 - - - DEAH-box helicase 35 [Source:HGNC Symbol;Acc:HGNC:15861]
5. SLC5A11 ENSGALG00000005933 28 0.858 - - - - - - 0.858 - - - solute carrier family 5 member 11 [Source:HGNC Symbol;Acc:HGNC:23091]
6. PKP1 ENSGALG00000000299 155 0.849 - - - - - - 0.849 - - - plakophilin 1 [Source:HGNC Symbol;Acc:HGNC:9023]
7. DEPDC7 ENSGALG00000011681 1181 0.849 - - - - - - 0.849 - - - DEP domain containing 7 [Source:NCBI gene;Acc:421593]
8. MPP2 ENSGALG00000035580 383 0.845 - - - - - - 0.845 - - - membrane palmitoylated protein 2 [Source:HGNC Symbol;Acc:HGNC:7220]
9. WHAMM ENSGALG00000006002 1678 0.843 - - - - - - 0.843 - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
10. NALCN ENSGALG00000016868 164 0.839 - - - - - - 0.839 - - - sodium leak channel, non-selective [Source:HGNC Symbol;Acc:HGNC:19082]
11. ENSGALG00000026659 ENSGALG00000026659 131 0.839 - - - - - - 0.839 - - -
12. CTSB ENSGALG00000030016 177 0.839 - - - - - - 0.839 - - - cathepsin B [Source:NCBI gene;Acc:396329]
13. TMEM150C ENSGALG00000011175 218 0.838 - - - - - - 0.838 - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
14. ENSGALG00000003817 ENSGALG00000003817 45 0.837 - - - - - - 0.837 - - -
15. MICAL3 ENSGALG00000013042 90 0.836 - - - - - - 0.836 - - - microtubule associated monooxygenase, calponin and LIM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24694]
16. CCDC135 CCDC135 220 0.836 - - - - - - 0.836 - - -
17. Mar-06 Mar-06 1218 0.834 - - - - - - 0.834 - - -
18. CFH ENSGALG00000002431 31 0.833 - - - - - - 0.833 - - - complement factor H, transcript variant X1
19. VRTN ENSGALG00000010232 692 0.833 - - - - - - 0.833 - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
20. ZC3H12C ENSGALG00000017154 59 0.833 - - - - - - 0.833 - - - zinc finger CCCH-type containing 12C [Source:HGNC Symbol;Acc:HGNC:29362]
21. RALGAPA2 240 0.833 - - - - - - 0.833 - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
22. ANXA8 ENSGALG00000005956 479 0.833 - - - - - - 0.833 - - - annexin A8, transcript variant X1
23. SKI ENSGALG00000001229 50 0.833 - - - - - - 0.833 - - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
24. QARS ENSGALG00000029980 4207 0.831 - - - - - - 0.831 - - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
25. NBEAL2 ENSGALG00000039120 277 0.83 - - - - - - 0.830 - - - neurobeachin like 2 [Source:HGNC Symbol;Acc:HGNC:31928]
26. ARHGAP20 ENSGALG00000017150 100 0.829 - - - - - - 0.829 - - - Rho GTPase activating protein 20 [Source:HGNC Symbol;Acc:HGNC:18357]
27. TRPC6 ENSGALG00000029416 281 0.829 - - - - - - 0.829 - - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
28. SLC27A6 ENSGALG00000000184 98 0.828 - - - - - - 0.828 - - - solute carrier family 27 member 6 [Source:HGNC Symbol;Acc:HGNC:11000]
29. CKV1.1 CKV1.1 140 0.828 - - - - - - 0.828 - - -
30. EPHB1 ENSGALG00000006609 346 0.828 - - - - - - 0.828 - - - EPH receptor B1, transcript variant X2
31. FAM185A ENSGALG00000008301 754 0.827 - - - - - - 0.827 - - - family with sequence similarity 185 member A [Source:HGNC Symbol;Acc:HGNC:22412]
32. WBP2NL ENSGALG00000011908 23 0.827 - - - - - - 0.827 - - - Gallus gallus WBP2 N-terminal like (WBP2NL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318465]
33. PYGO1 ENSGALG00000004369 527 0.825 - - - - - - 0.825 - - - pygopus family PHD finger 1 [Source:NCBI gene;Acc:415408]
34. ENSGALG00000026930 ENSGALG00000026930 681 0.825 - - - - - - 0.825 - - -
35. UBAC2 ENSGALG00000016880 1343 0.824 - - - - - - 0.824 - - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
36. TMEM248 ENSGALG00000033954 248 0.823 - - - - - - 0.823 - - - transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
37. PLXNB2 ENSGALG00000039861 338 0.821 - - - - - - 0.821 - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
38. RAPGEF5 ENSGALG00000034024 1264 0.821 - - - - - - 0.821 - - - Rap guanine nucleotide exchange factor 5 [Source:HGNC Symbol;Acc:HGNC:16862]
39. GNB1L ENSGALG00000001925 1981 0.82 - - - - - - 0.820 - - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
40. ADAMTSL1 1479 0.816 - - - - - - 0.816 - - - ADAMTS like 1, transcript variant X3
41. CHGA ENSGALG00000010820 1028 0.814 - - - - - - 0.814 - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
42. NOL8 ENSGALG00000004750 1433 0.813 - - - - - - 0.813 - - - nucleolar protein 8 [Source:HGNC Symbol;Acc:HGNC:23387]
43. NCBP2 ENSGALG00000006843 938 0.813 - - - - - - 0.813 - - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
44. CNTN1 ENSGALG00000009523 158 0.812 - - - - - - 0.812 - - - contactin 1 [Source:NCBI gene;Acc:417786]
45. C8G ENSGALG00000040644 443 0.81 - - - - - - 0.810 - - - complement C8 gamma chain [Source:HGNC Symbol;Acc:HGNC:1354]
46. GPSM2 ENSGALG00000002090 50 0.809 - - - - - - 0.809 - - - G protein signaling modulator 2 [Source:HGNC Symbol;Acc:HGNC:29501]
47. NPY2R ENSGALG00000009280 29 0.809 - - - - - - 0.809 - - - neuropeptide Y receptor Y2 [Source:NCBI gene;Acc:422405]
48. ZFHX4 ENSGALG00000037164 811 0.806 - - - - - - 0.806 - - - zinc finger homeobox 4 [Source:HGNC Symbol;Acc:HGNC:30939]
49. ZRANB3 ENSGALG00000012223 475 0.805 - - - - - - 0.805 - - - zinc finger RANBP2-type containing 3 [Source:HGNC Symbol;Acc:HGNC:25249]
50. SRSF1 ENSGALG00000005525 4376 0.804 - - - - - - 0.804 - - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
51. DTNBP1 ENSGALG00000012703 539 0.804 - - - - - - 0.804 - - - dystrobrevin binding protein 1 [Source:NCBI gene;Acc:420840]
52. FICD ENSGALG00000004858 171 0.804 - - - - - - 0.804 - - - FIC domain containing [Source:HGNC Symbol;Acc:HGNC:18416]
53. ECHDC1 ENSGALG00000014828 958 0.801 - - - - - - 0.801 - - - ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
54. TFAP2C ENSGALG00000007690 768 0.801 - - - - - - 0.801 - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
55. GABRG2 ENSGALG00000038042 211 0.798 - - - - - - 0.798 - - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
56. SNX16 ENSGALG00000029678 1104 0.797 - - - - - - 0.797 - - - sorting nexin 16 [Source:NCBI gene;Acc:420202]
57. MAN1B1 ENSGALG00000037375 308 0.797 - - - - - - 0.797 - - - mannosidase alpha class 1B member 1 [Source:HGNC Symbol;Acc:HGNC:6823]
58. FAM47E-STBD1 FAM47E-STBD1 1148 0.796 - - - - - - 0.796 - - -
59. IMMP2L ENSGALG00000027876 962 0.795 - - - - - - 0.795 - - - inner mitochondrial membrane peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:14598]
60. CSNK1A1 495 0.795 - - - - - - 0.795 - - - casein kinase 1 alpha 1, transcript variant X4
61. RNF38 ENSGALG00000015311 506 0.795 - - - - - - 0.795 - - - ring finger protein 38 [Source:HGNC Symbol;Acc:HGNC:18052]
62. TMEM136 ENSGALG00000026316 668 0.795 - - - - - - 0.795 - - - transmembrane protein 136 [Source:NCBI gene;Acc:100857845]
63. CCDC117 ENSGALG00000005784 185 0.794 - - - - - - 0.794 - - - coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:HGNC:26599]
64. ERICH1 ENSGALG00000031021 1495 0.794 - - - - - - - - 0.794 - glutamate rich 1 [Source:NCBI gene;Acc:421904]
65. TNFAIP1 ENSGALG00000005715 3347 0.792 - - - - - - 0.792 - - - TNF alpha induced protein 1 [Source:NCBI gene;Acc:417672]
66. DPYSL4 ENSGALG00000010490 3431 0.792 - - - - - - 0.792 - - - dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
67. C5NT1AL ENSGALG00000006608 277 0.787 - - - - - - 0.787 - - - cytosolic 5'-nucleotidase 1A-like, transcript variant X2
68. GPR180 ENSGALG00000016897 1545 0.787 - - - - - - 0.787 - - - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
69. UACA ENSGALG00000034100 617 0.786 - - - - - - - - 0.786 - uveal autoantigen with coiled-coil domains and ankyrin repeats
70. RAB21 ENSGALG00000010183 7718 0.786 - - - - - - 0.786 - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
71. SCUBE2 ENSGALG00000032161 63 0.785 - - - - - - 0.785 - - - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
72. PLEK2 ENSGALG00000009562 706 0.783 - - - - - - 0.783 - - - pleckstrin 2 [Source:NCBI gene;Acc:423278]
73. PCYOX1L ENSGALG00000040340 2162 0.782 - - - - - - 0.782 - - - prenylcysteine oxidase 1 like [Source:HGNC Symbol;Acc:HGNC:28477]
74. HIST1H111R ENSGALG00000011783 1513 0.781 - - - - - - 0.781 - - - histone cluster 1, H1.11R [Source:NCBI gene;Acc:427896]
75. WDR59 ENSGALG00000002798 815 0.781 - - - - - - 0.781 - - - WD repeat domain 59 [Source:NCBI gene;Acc:415688]
76. CREBL2 ENSGALG00000037030 1247 0.779 - - - - - - 0.779 - - - cAMP responsive element binding protein like 2 [Source:NCBI gene;Acc:426496]
77. IBTK ENSGALG00000015864 3154 0.779 - - - - - - - - 0.779 - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
78. OSBPL2 ENSGALG00000005195 94 0.778 - - - - - - 0.778 - - - oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
79. FBXO34 ENSGALG00000032563 656 0.778 - - - - - - - - 0.778 - F-box protein 34 [Source:NCBI gene;Acc:423554]
80. TMEM120A ENSGALG00000001975 2222 0.778 - - - - - - 0.778 - - - transmembrane protein 120A [Source:HGNC Symbol;Acc:HGNC:21697]
81. CVG1 CVG1 636 0.778 - - - - - - 0.778 - - -
82. AMDHD2 ENSGALG00000009234 1730 0.778 - - - - - - 0.778 - - - Gallus gallus amidohydrolase domain containing 2 (AMDHD2), mRNA. [Source:RefSeq mRNA;Acc:NM_001345995]
83. TM2D1 ENSGALG00000020614 764 0.777 - - - - - - 0.777 - - - TM2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24142]
84. ENSGALG00000020883 ENSGALG00000020883 299 0.776 - - - - - - 0.776 - - -
85. KCNK1 ENSGALG00000011005 1643 0.775 - - - - - - 0.775 - - - potassium two pore domain channel subfamily K member 1 [Source:HGNC Symbol;Acc:HGNC:6272]
86. ZFHX3 ENSGALG00000000713 2340 0.774 - - - - - - 0.774 - - - zinc finger homeobox 3 [Source:NCBI gene;Acc:395682]
87. OSTM1 ENSGALG00000015306 192 0.773 - - - - - - 0.773 - - - osteopetrosis associated transmembrane protein 1 [Source:NCBI gene;Acc:421773]
88. DDX46 ENSGALG00000006404 8765 0.772 - - - - - - 0.772 - - - DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]
89. WHSC1L1 4065 0.771 - - - - - - 0.771 - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
90. CASC5 CASC5 695 0.771 - - - - - - - - 0.771 -
91. AP1S2 ENSGALG00000016551 421 0.771 - - - - - - 0.771 - - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
92. IMPAD1 ENSGALG00000041573 801 0.769 - - - - - - 0.769 - - - inositol monophosphatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26019]
93. BRCA1 ENSGALG00000002781 2052 0.768 - - - - - - 0.768 - - - BRCA1, DNA repair associated [Source:NCBI gene;Acc:373983]
94. LUZP1 ENSGALG00000025858 947 0.765 - - - - - - 0.765 - - - leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
95. RNF121 ENSGALG00000000868 452 0.764 - - - - - - 0.764 - - - ring finger protein 121 [Source:HGNC Symbol;Acc:HGNC:21070]
96. CCK ENSGALG00000029788 213 0.764 - - - - - - 0.764 - - - cholecystokinin [Source:NCBI gene;Acc:414884]
97. MN1 ENSGALG00000026119 1808 0.763 - - - - - - 0.763 - - - MN1 proto-oncogene, transcriptional regulator [Source:HGNC Symbol;Acc:HGNC:7180]
98. NR2C1 ENSGALG00000011327 5109 0.763 - - - - - - 0.763 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
99. ENSGALG00000006865 ENSGALG00000006865 307 0.761 - - - - - - 0.761 - - -
100. CACTIN ENSGALG00000024391 1408 0.76 - - - - - - 0.760 - - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]

There are 100 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA