Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CAPN13

Gene Name Gene ID Reads Annotation
CAPN13 ENSGALG00000020084 6 calpain 13 [Source:HGNC Symbol;Acc:HGNC:16663]











Genes with expression patterns similar to CAPN13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CAPN13 ENSGALG00000020084 6 4 - - 1.000 1.000 1.000 1.000 - - - - calpain 13 [Source:HGNC Symbol;Acc:HGNC:16663]
2. ALDH8A1 ENSGALG00000013969 8 1.922 - - - 1.000 - 0.922 - - - - aldehyde dehydrogenase 8 family member A1 [Source:HGNC Symbol;Acc:HGNC:15471]
3. RAB43 ENSGALG00000005021 5 1.696 - - 0.819 - 0.877 - - - - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
4. SYTL2L ENSGALG00000008326 5 1 - - - - 1.000 - - - - - synaptotagmin-like protein 2-like, transcript variant X4
5. EPHB6 ENSGALG00000014749 30 1 - - - - 1.000 - - - - - EPH receptor B6 [Source:NCBI gene;Acc:418308]
6. CHAT ENSGALG00000002289 26 1 - - - - 1.000 - - - - - choline O-acetyltransferase [Source:NCBI gene;Acc:395314]
7. POMT2 ENSGALG00000041962 1 1 - - - - 1.000 - - - - - protein O-mannosyltransferase 2, transcript variant X7
8. LL LL 2 1 - - 1.000 - - - - - - -
9. AKAP14 26 1 - - - - 1.000 - - - - - A-kinase anchoring protein 14, transcript variant X1
10. MTMR3 ENSGALG00000008051 9 1 - - - 1.000 - - - - - - myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
11. ACSL6 ENSGALG00000006644 5 1 - - - - 1.000 - - - - - acyl-CoA synthetase long-chain family member 6, transcript variant X3
12. RXFP1 ENSGALG00000009429 10 1 - - - - 1.000 - - - - - relaxin family peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:19718]
13. PCDH19 ENSGALG00000006822 13 1 - - - - 1.000 - - - - - protocadherin 19 [Source:NCBI gene;Acc:422263]
14. ENSGALG00000025801 ENSGALG00000025801 5 1 - - - 1.000 - - - - - -
15. CTRB2 ENSGALG00000000038 6 1 - - - 1.000 - - - - - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
16. CDHR4 2 1 - - - - 1.000 - - - - - cadherin related family member 4
17. ACOT1L ENSGALG00000008752 6 1 - - - 1.000 - - - - - - acyl-CoA thioesterase 1-like
18. ENSGALG00000000188 ENSGALG00000000188 11 1 - - 1.000 - - - - - - -
19. SNORD100 SNORD100 270 1 - - - - 1.000 - - - - -
20. SLC25A25 ENSGALG00000005095 4 1 - - - - 1.000 - - - - - solute carrier family 25 member 25 [Source:HGNC Symbol;Acc:HGNC:20663]
21. ABCB1LB ABCB1LB 4 1 - - 1.000 - - - - - - -
22. SLC25A43 ENSGALG00000008682 1 1 - - - - 1.000 - - - - - solute carrier family 25 member 43 [Source:HGNC Symbol;Acc:HGNC:30557]
23. ENSGALG00000000099 ENSGALG00000000099 16 1 - - - 1.000 - - - - - -
24. RCBTB2 ENSGALG00000017000 3 1 - - 1.000 - - - - - - - RCC1 and BTB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:1914]
25. FBXL4 ENSGALG00000015490 12 1 - - - - 1.000 - - - - - F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
26. TRHDE ENSGALG00000010200 4 1 - - - - 1.000 - - - - - thyrotropin releasing hormone degrading enzyme [Source:HGNC Symbol;Acc:HGNC:30748]
27. EMID1 4 1 - - - - 1.000 - - - - - EMI domain containing 1, transcript variant X5
28. MUC6 ENSGALG00000040530 11 1 - - - 1.000 - - - - - - mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]
29. TPO ENSGALG00000016370 98 1 - - 1.000 - - - - - - - thyroid peroxidase [Source:HGNC Symbol;Acc:HGNC:12015]
30. MECR ENSGALG00000032763 110 1 - - - 1.000 - - - - - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
31. ENSGALG00000000526 ENSGALG00000000526 2 1 - - - 1.000 - - - - - -
32. IL15 ENSGALG00000009870 3 1 - - 1.000 - - - - - - - interleukin 15 [Source:NCBI gene;Acc:395258]
33. CLDN12 ENSGALG00000009038 16 1 - - 1.000 - - - - - - - claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
34. LOC101750367 ENSGALG00000006693 5 1 - - 1.000 - - - - - - - BPI fold-containing family B member 4-like, transcript variant X3
35. BST1 ENSGALG00000014509 12 1 - - 1.000 - - - - - - - bone marrow stromal cell antigen 1 [Source:NCBI gene;Acc:422828]
36. FGF20 ENSGALG00000013663 20 1 - - - 1.000 - - - - - - fibroblast growth factor 20 [Source:HGNC Symbol;Acc:HGNC:3677]
37. TSNAXIP1 ENSGALG00000001533 9 1 - - - - 1.000 - - - - - translin associated factor X interacting protein 1, transcript variant X2
38. BRI3BP ENSGALG00000002913 3 1 - - - 1.000 - - - - - - BRI3 binding protein [Source:NCBI gene;Acc:416812]
39. HDC ENSGALG00000023436 3 1 - - - - 1.000 - - - - - histidine decarboxylase [Source:NCBI gene;Acc:415454]
40. ARL15 ENSGALG00000014911 13 1 - - - - 1.000 - - - - - ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
41. TRAF2 ENSGALG00000042838 24 1 - - - - 1.000 - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
42. ENSGALG00000005511 ENSGALG00000005511 7 1 - - - 1.000 - - - - - -
43. HEPACAM2 ENSGALG00000009482 3 1 - - - - 1.000 - - - - - HEPACAM family member 2 [Source:HGNC Symbol;Acc:HGNC:27364]
44. C2CD3 ENSGALG00000017314 13 1 - - - - 1.000 - - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
45. PTGER2 ENSGALG00000012396 1 1 - - 1.000 - - - - - - - prostaglandin E receptor 2 [Source:NCBI gene;Acc:100034745]
46. TESK2 ENSGALG00000010230 9 1 - - - - 1.000 - - - - - testis associated actin remodelling kinase 2 [Source:HGNC Symbol;Acc:HGNC:11732]
47. GRHL2 ENSGALG00000037687 3 1 - - - - 1.000 - - - - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
48. HOXB1 ENSGALG00000013454 9 1 - - - - 1.000 - - - - - homeobox B1 [Source:NCBI gene;Acc:395900]
49. GPR22 ENSGALG00000008032 5 1 - - - - 1.000 - - - - - G protein-coupled receptor 22, transcript variant X1
50. C21H1orf158 C21H1orf158 1 1 - - - 1.000 - - - - - -
51. CDCA4L ENSGALG00000023023 1 1 - - - - 1.000 - - - - - cell division cycle associated 4-like, transcript variant X1
52. FAM212B ENSGALG00000001480 2 1 - - - 1.000 - - - - - - family with sequence similarity 212, member B
53. NQO1 ENSGALG00000023437 13 1 - - 1.000 - - - - - - - NAD(P)H quinone dehydrogenase 1 [Source:NCBI gene;Acc:769737]
54. ENSGALG00000016493 ENSGALG00000016493 2 1 - - 1.000 - - - - - - -
55. SLC39A12 ENSGALG00000008602 6 1 - - 1.000 - - - - - - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
56. MMP10 ENSGALG00000019063 2 1 - - - 1.000 - - - - - - matrix metallopeptidase 10 [Source:NCBI gene;Acc:418981]
57. IL15RA ENSGALG00000008153 3 1 - - - 1.000 - - - - - - interleukin 15 receptor, alpha, transcript variant X2
58. KIAA1211L ENSGALG00000016755 2 1 - - 1.000 - - - - - - - KIAA1211 like [Source:HGNC Symbol;Acc:HGNC:33454]
59. GPR87 ENSGALG00000010377 3 1 - - 1.000 - - - - - - - G protein-coupled receptor 87 [Source:HGNC Symbol;Acc:HGNC:4538]
60. AKAP11 ENSGALG00000022739 82 1 - - - - 1.000 - - - - - A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
61. MYO1D ENSGALG00000000674 14 1 - - - 1.000 - - - - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
62. CRK ENSGALG00000002656 15 1 - - - - 1.000 - - - - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
63. PKD2 ENSGALG00000010921 55 1 - - - 1.000 - - - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
64. FSTL1 ENSGALG00000014970 25 1 - - - - 1.000 - - - - - follistatin like 1 [Source:NCBI gene;Acc:395349]
65. BRINP2 ENSGALG00000004448 26 1 - - - - 1.000 - - - - - BMP/retinoic acid inducible neural specific 2 [Source:HGNC Symbol;Acc:HGNC:13746]
66. SCN1A ENSGALG00000010943 6 1 - - - - 1.000 - - - - - sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]
67. HFM1 ENSGALG00000006091 5 1 - - - - 1.000 - - - - - HFM1, ATP dependent DNA helicase homolog [Source:HGNC Symbol;Acc:HGNC:20193]
68. ANO3 ENSGALG00000013311 16 1 - - - - 1.000 - - - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
69. ADAP1 ENSGALG00000003819 13 1 - - - - 1.000 - - - - - ArfGAP with dual PH domains 1 [Source:HGNC Symbol;Acc:HGNC:16486]
70. ADCY1 ENSGALG00000031170 4 1 - - - - 1.000 - - - - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
71. KLHL8 ENSGALG00000011017 3 1 - - - 1.000 - - - - - - kelch like family member 8 [Source:HGNC Symbol;Acc:HGNC:18644]
72. DAGLA ENSGALG00000036492 3 1 - - - - 1.000 - - - - - diacylglycerol lipase alpha [Source:HGNC Symbol;Acc:HGNC:1165]
73. ENSGALG00000003051 ENSGALG00000003051 1 1 - - - - 1.000 - - - - -
74. BTBD10 ENSGALG00000005369 56 1 - - - - 1.000 - - - - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
75. XDH ENSGALG00000008701 10 1 - - - - 1.000 - - - - - xanthine dehydrogenase [Source:NCBI gene;Acc:396025]
76. PLD5 ENSGALG00000010737 5 1 - - - - 1.000 - - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
77. NRXN3 ENSGALG00000010518, ENSGALG00000027255 3 0.965 - - 0.965 - - - - - - - neurexin 3 [Source:NCBI gene;Acc:423385]
78. NEIL2 ENSGALG00000016664 4 0.956 - - - 0.956 - - - - - - nei like DNA glycosylase 2 [Source:NCBI gene;Acc:422037]
79. PDXK ENSGALG00000016205 26 0.953 - - - - - 0.953 - - - - pyridoxal kinase [Source:NCBI gene;Acc:418549]
80. GSTT1 ENSGALG00000006344 22 0.953 - - - - - 0.953 - - - - glutathione S-transferase theta 1 [Source:NCBI gene;Acc:396322]
81. SERPINF2 ENSGALG00000002987 236 0.952 - - - - 0.952 - - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
82. DIO1 ENSGALG00000010736 87 0.943 - - 0.943 - - - - - - - iodothyronine deiodinase 1 [Source:NCBI gene;Acc:395940]
83. WFIKKN2 ENSGALG00000007367 9 0.94 - - 0.940 - - - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30916]
84. ENSGALG00000001629 ENSGALG00000001629 31 0.933 - - - 0.933 - - - - - -
85. C1orf116 ENSGALG00000001091 34 0.933 - - - 0.933 - - - - - - chromosome 1 open reading frame 116 [Source:HGNC Symbol;Acc:HGNC:28667]
86. ALPI ENSGALG00000023866 19 0.931 - - - 0.931 - - - - - - alkaline phosphatase, intestinal, transcript variant X2
87. LPHN3 LPHN3 41 0.922 - - - - - 0.922 - - - -
88. KCNH7 ENSGALG00000038543 20 0.922 - - - - - 0.922 - - - - potassium voltage-gated channel subfamily H member 7 [Source:HGNC Symbol;Acc:HGNC:18863]
89. APELA ENSGALG00000023444 3 0.922 - - - - - 0.922 - - - - apelin receptor early endogenous ligand [Source:NCBI gene;Acc:770154]
90. PRKD3 ENSGALG00000010612 2 0.922 - - - - - 0.922 - - - - protein kinase D3 [Source:HGNC Symbol;Acc:HGNC:9408]
91. VCAM1 ENSGALG00000005257 102 0.922 - - - - - 0.922 - - - - vascular cell adhesion molecule 1, transcript variant X1
92. IL23R IL23R 25 0.922 - - - - - 0.922 - - - -
93. ENSGALG00000026267 ENSGALG00000026267 1 0.922 - - - - - 0.922 - - - -
94. ACER2 ENSGALG00000015081 18 0.922 - - - - - 0.922 - - - - alkaline ceramidase 2 [Source:HGNC Symbol;Acc:HGNC:23675]
95. SLC6A9 ENSGALG00000010098 5 0.922 - - - - - 0.922 - - - - solute carrier family 6 member 9 [Source:NCBI gene;Acc:424576]
96. QRSL1 ENSGALG00000015338 16 0.922 - - - - - 0.922 - - - - QRSL1, glutaminyl-tRNA amidotransferase subunit A [Source:HGNC Symbol;Acc:HGNC:21020]
97. KDM1B ENSGALG00000012685 11 0.922 - - - - - 0.922 - - - - lysine demethylase 1B [Source:HGNC Symbol;Acc:HGNC:21577]
98. HTR2A ENSGALG00000016992 73 0.922 - - - - - 0.922 - - - - Gallus gallus 5-hydroxytryptamine receptor 2A (HTR2A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318420]
99. TMEM204 ENSGALG00000029047 8 0.922 - - - - - 0.922 - - - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
100. SK2 SK2 74 0.922 - - - - - 0.922 - - - -

There are 123 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA