Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CAPN1

Gene Name Gene ID Reads Annotation
CAPN1 ENSGALG00000041685 4011 calpain 1 [Source:NCBI gene;Acc:693249]











Genes with expression patterns similar to CAPN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CAPN1 ENSGALG00000041685 4011 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calpain 1 [Source:NCBI gene;Acc:693249]
2. CERCAM ENSGALG00000004986 5158 1.451 - - - - - - 0.728 0.723 - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
3. THOC3 ENSGALG00000024172 7617 0.965 - - - - - - 0.965 - - - THO complex 3 [Source:NCBI gene;Acc:416232]
4. ACTR10 ENSGALG00000012041 2752 0.962 - - - - - - 0.962 - - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
5. BEND5 ENSGALG00000010505 3298 0.96 - - - - - - 0.960 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
6. TAF1B ENSGALG00000016437 2318 0.957 - - - - - - 0.957 - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
7. APCDD1 ENSGALG00000000894 1482 0.954 - - - - - - 0.954 - - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]
8. EFNB1 ENSGALG00000036539 2706 0.947 - - - - - - 0.947 - - - ephrin B1 [Source:NCBI gene;Acc:395896]
9. CLASP1 ENSGALG00000011645 1378 0.944 - - - - - - 0.944 - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
10. PRDM10 632 0.944 - - - - - - 0.944 - - - PR domain 10, transcript variant X10
11. CLK3 ENSGALG00000001362 2171 0.943 - - - - - - 0.943 - - - CDC like kinase 3 [Source:NCBI gene;Acc:415295]
12. ANGPTL2 ENSGALG00000000927 2580 0.942 - - - - - - 0.942 - - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
13. AP1AR ENSGALG00000028807 2398 0.941 - - - - - - 0.941 - - - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
14. EML1 1941 0.94 - - - - - - 0.940 - - - echinoderm microtubule associated protein like 1, transcript variant X11
15. C12orf66 ENSGALG00000027682 2110 0.939 - - - - - - 0.939 - - - chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
16. FDFT1 ENSGALG00000016665 3053 0.939 - - - - - - 0.939 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
17. C11H19ORF12 C11H19ORF12 5149 0.939 - - - - - - 0.939 - - -
18. DTX2 ENSGALG00000001905 1475 0.939 - - - - - - 0.939 - - - deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
19. CDC16 ENSGALG00000016816 2162 0.939 - - - - - - 0.939 - - - cell division cycle 16 [Source:NCBI gene;Acc:418735]
20. PYCR1 ENSGALG00000007300 7987 0.938 - - - - - - 0.938 - - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
21. BTBD7 4136 0.938 - - - - - - 0.938 - - - BTB domain containing 7, transcript variant X2
22. C9orf85 ENSGALG00000026001 4110 0.938 - - - - - - 0.938 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
23. SLC28A3 ENSGALG00000012593 131 0.938 - - - - - - 0.938 - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
24. TP53BP1 ENSGALG00000042201 708 0.937 - - - - - - 0.937 - - - tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
25. FXYD6 ENSGALG00000025937 4073 0.937 - - - - - - 0.937 - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
26. ASTN2 ENSGALG00000007038 1748 0.937 - - - - - - 0.937 - - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
27. LRR1 ENSGALG00000012230 1062 0.936 - - - - - - 0.936 - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
28. DDX42 ENSGALG00000000581 8780 0.935 - - - - - - 0.935 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
29. COL17A1 ENSGALG00000029617 167 0.935 - - - - - - 0.935 - - - collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]
30. ESCO1 ENSGALG00000014936 739 0.935 - - - - - - 0.935 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
31. RAD51A RAD51A 2132 0.935 - - - - - - 0.935 - - -
32. C7orf55 C7orf55 7083 0.934 - - - - - - 0.934 - - -
33. MYH15 ENSGALG00000015358 6304 0.934 - - - - - - 0.934 - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
34. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.934 - - - - - - 0.934 - - - pseudouridylate synthase-like 1, transcript variant X8
35. MRPL23 ENSGALG00000006561 13737 0.934 - - - - - - 0.934 - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
36. AP1S3 ENSGALG00000005171 2981 0.934 - - - - - - 0.934 - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
37. LPXN 133 0.933 - - - - - - 0.933 - - - leupaxin, transcript variant X4
38. BBS4 ENSGALG00000001798 667 0.933 - - - - - - 0.933 - - - Bardet-Biedl syndrome 4 [Source:NCBI gene;Acc:415318]
39. C7orf63 C7orf63 147 0.932 - - - - - - 0.932 - - -
40. CLN6 ENSGALG00000007981 5656 0.932 - - - - - - 0.932 - - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
41. LMO4 ENSGALG00000006252 3686 0.931 - - - - - - 0.931 - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
42. ARHGEF3 ENSGALG00000005481 683 0.931 - - - - - - 0.931 - - - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
43. TNFRSF11B ENSGALG00000043167 911 0.931 - - - - - - 0.931 - - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
44. BCAR3 358 0.93 - - - - - - 0.930 - - - breast cancer anti-estrogen resistance 3, transcript variant X9
45. LIG3 ENSGALG00000002288 7198 0.93 - - - - - - 0.930 - - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
46. TMEM14A ENSGALG00000019894 5279 0.929 - - - - - - 0.929 - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
47. C1GALT1 ENSGALG00000009752 7148 0.929 - - - - - - 0.929 - - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
48. MYEOV2 MYEOV2 5155 0.929 - - - - - - 0.929 - - -
49. FREM3 ENSGALG00000020561 1824 0.929 - - - - - - 0.929 - - - FRAS1 related extracellular matrix 3
50. TUFT1 ENSGALG00000032955 1317 0.928 - - - - - - 0.928 - - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
51. C9H21ORF2 C9H21ORF2 3161 0.928 - - - - - - 0.928 - - -
52. ZER1 ENSGALG00000004659 1635 0.927 - - - - - - 0.927 - - - zyg-11 related cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:30960]
53. RNF144A ENSGALG00000028709 2855 0.927 - - - - - - 0.927 - - - ring finger protein 144A, transcript variant X1
54. SRA1 ENSGALG00000040453 266 0.927 - - - - - - 0.927 - - - steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
55. PIGF ENSGALG00000020057 201 0.927 - - - - - - 0.927 - - - phosphatidylinositol glycan anchor biosynthesis class F [Source:HGNC Symbol;Acc:HGNC:8962]
56. PIGL ENSGALG00000004492 669 0.927 - - - - - - 0.927 - - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
57. KLF11 ENSGALG00000016440 65 0.927 - - - - - - 0.927 - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
58. SALL1 ENSGALG00000039238 3740 0.927 - - - - - - 0.927 - - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
59. NARFL ENSGALG00000005365 2668 0.926 - - - - - - 0.926 - - - nuclear prelamin A recognition factor like [Source:NCBI gene;Acc:416535]
60. PTDSS2 ENSGALG00000004300 682 0.926 - - - - - - 0.926 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
61. WHSC1 1712 0.926 - - - - - - 0.926 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
62. KCTD1 ENSGALG00000015124 6121 0.926 - - - - - - 0.926 - - - potassium channel tetramerization domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18249]
63. TIRAP ENSGALG00000040224 2578 0.926 - - - - - - 0.926 - - - TIR domain containing adaptor protein [Source:NCBI gene;Acc:419715]
64. NUDCD1 ENSGALG00000040879 2965 0.926 - - - - - - 0.926 - - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
65. ARL6IP4 ENSGALG00000003682 2467 0.924 - - - - - - 0.924 - - - ADP ribosylation factor like GTPase 6 interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:18076]
66. YWHAQ ENSGALG00000016433 3450 0.923 - - - - - - 0.923 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
67. SQSTM1 ENSGALG00000035804 2238 0.923 - - - - - - 0.923 - - - sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]
68. HYAL1 ENSGALG00000000785 1778 0.923 - - - - - - 0.923 - - - hyaluronoglucosaminidase 1, transcript variant X3
69. ZBTB26 ENSGALG00000042762 1920 0.923 - - - - - - 0.923 - - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
70. ZNF830 ENSGALG00000013156 3896 0.921 - - - - - - 0.921 - - - zinc finger protein 830
71. GADD45 GADD45 8780 0.921 - - - - - - 0.921 - - -
72. ANXA11 ENSGALG00000043826 5189 0.921 - - - - - - 0.921 - - - annexin A11 [Source:NCBI gene;Acc:423637]
73. PANK1 ENSGALG00000006431 2910 0.921 - - - - - - 0.921 - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
74. SUMF1 ENSGALG00000008286 941 0.92 - - - - - - 0.920 - - - sulfatase modifying factor 1 [Source:HGNC Symbol;Acc:HGNC:20376]
75. ABHD13 ENSGALG00000016853 4975 0.92 - - - - - - 0.920 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
76. RFFL ENSGALG00000002225 928 0.92 - - - - - - 0.920 - - - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
77. IWS1 ENSGALG00000001803 2305 0.92 - - - - - - 0.920 - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
78. NRCAM ENSGALG00000009514 490 0.919 - - - - - - 0.919 - - - neuronal cell adhesion molecule [Source:NCBI gene;Acc:396202]
79. MRM1 ENSGALG00000039523 2009 0.918 - - - - - - 0.918 - - - mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
80. FAM86A FAM86A 1860 0.917 - - - - - - 0.917 - - -
81. NNT ENSGALG00000014869 8496 0.916 - - - - - - 0.916 - - - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
82. TBC1D12 ENSGALG00000034044 5588 0.916 - - - - - - 0.916 - - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
83. DLAT ENSGALG00000007904 3297 0.915 - - - - - - 0.915 - - - dihydrolipoamide S-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2896]
84. PPIL2 ENSGALG00000042052 4349 0.914 - - - - - - 0.914 - - - peptidylprolyl isomerase like 2 [Source:NCBI gene;Acc:416775]
85. RHOT2 ENSGALG00000002497 1744 0.912 - - - - - - 0.912 - - - ras homolog family member T2 [Source:NCBI gene;Acc:427651]
86. TSPAN13 ENSGALG00000027240 8999 0.91 - - - - - - 0.910 - - - tetraspanin 13 [Source:NCBI gene;Acc:420595]
87. COG4 ENSGALG00000002603 4485 0.91 - - - - - - 0.910 - - - component of oligomeric golgi complex 4 [Source:NCBI gene;Acc:415681]
88. NAPEPLD ENSGALG00000008285 1295 0.909 - - - - - - 0.909 - - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
89. SDK1 ENSGALG00000004420 571 0.909 - - - - - - 0.909 - - - sidekick cell adhesion molecule 1 [Source:NCBI gene;Acc:373894]
90. FBXW7 ENSGALG00000010103 5982 0.909 - - - - - - 0.909 - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
91. NFRKB ENSGALG00000001306 4469 0.909 - - - - - - 0.909 - - - nuclear factor related to kappaB binding protein [Source:NCBI gene;Acc:419730]
92. TTI1 ENSGALG00000006791 1218 0.909 - - - - - - 0.909 - - - TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
93. RAD17 ENSGALG00000015571 1374 0.908 - - - - - - 0.908 - - - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
94. USP25 ENSGALG00000015693 2567 0.907 - - - - - - 0.907 - - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
95. BSDC1 ENSGALG00000003405 3701 0.906 - - - - - - 0.906 - - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
96. CYTL1 ENSGALG00000015015 4438 0.906 - - - - - - 0.906 - - - cytokine like 1 [Source:HGNC Symbol;Acc:HGNC:24435]
97. OSBPL1A ENSGALG00000015086 2702 0.906 - - - - - - 0.906 - - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
98. MITF ENSGALG00000039583 865 0.905 - - - - - - 0.905 - - - melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
99. KIAA1468 2062 0.902 - - - - - - 0.902 - - - KIAA1468, transcript variant X5
100. ATXN7 ENSGALG00000007302 2596 0.902 - - - - - - 0.902 - - - ataxin 7, transcript variant X3

There are 210 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA