Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CAPN1

Gene Name Gene ID Reads Annotation
CAPN1 ENSDARG00000055338 683 calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]










Genes with expression patterns similar to CAPN1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CAPN1 ENSDARG00000055338 683 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
2. inpp5e ENSDARG00000103926 567 2.527 - 0.780 0.971 - - 0.776 - - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
3. PTGFRN_1 ENSDARG00000075505 1447 2.348 - - - - - 0.855 0.779 0.714 - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
4. slc35c1 ENSDARG00000104669 65 1.802 - 0.828 0.974 - - - - - - solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
5. lysmd3 ENSDARG00000024693 754 1.771 - 0.828 0.943 - - - - - - LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
6. trappc2 ENSDARG00000097660 760 1.746 - 0.809 0.937 - - - - - - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
7. map3k10 ENSDARG00000055672 284 1.741 - 0.767 0.974 - - - - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
8. herc2 ENSDARG00000073841 486 1.721 - - 0.959 - - 0.762 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070718-6]
9. CU104697.1 CU104697.1 19 1.707 - 0.879 - - - 0.828 - - -
10. inpp4b ENSDARG00000075201 267 1.7 - - 0.976 - - 0.724 - - - inositol polyphosphate-4-phosphatase type II B [Source:ZFIN;Acc:ZDB-GENE-090312-97]
11. alkbh3 ENSDARG00000045606, ENSDARG00000097208 169 1.679 - 0.884 - - - 0.795 - - - alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase [Source:ZFIN;Acc:ZDB-GENE-040801-254]
12. ABHD17A_1 ABHD17A_1 504 1.673 - - 0.928 - - 0.745 - - -
13. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.668 - - 0.937 - - - 0.731 - -
14. pcmtl ENSDARG00000042848, ENSDARG00000110149 301 1.661 - 0.888 - - - 0.773 - - - l-isoaspartyl protein carboxyl methyltransferase, like [Source:ZFIN;Acc:ZDB-GENE-040426-1738]
15. hsd17b14 ENSDARG00000054842 1394 1.659 - - 0.953 - - - 0.706 - - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
16. hrh3 ENSDARG00000035942 32 1.655 - 0.871 - - - 0.784 - - - histamine receptor H3 [Source:ZFIN;Acc:ZDB-GENE-040724-204]
17. asap2b ENSDARG00000019564 1660 1.649 - - 0.900 - - - 0.749 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
18. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 1.635 - 0.700 0.935 - - - - - - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
19. fn1 fn1 2538 1.634 - - 0.927 - - - 0.707 - -
20. tgfb1a ENSDARG00000041502 972 1.599 - - - - - 0.842 0.757 - - transforming growth factor, beta 1a [Source:ZFIN;Acc:ZDB-GENE-030618-1]
21. wasa ENSDARG00000015149 26 1.595 - 0.803 - - - 0.792 - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) a [Source:ZFIN;Acc:ZDB-GENE-081104-419]
22. ctdp1 ENSDARG00000017522 731 1.595 - - 0.880 - - 0.715 - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040720-1]
23. wif1 ENSDARG00000005541 1689 1.59 - - 0.779 - - - 0.811 - - wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
24. CSGALNACT1 CSGALNACT1 116 1.569 - 0.731 - - - 0.838 - - -
25. MAD2L1BP ENSDARG00000104943 351 1.544 0.710 0.834 - - - - - - - MAD2L1 binding protein [Source:ZFIN;Acc:ZDB-GENE-161230-19]
26. wdr26b ENSDARG00000006812 2216 1.535 - - 0.803 - - - 0.732 - - WD repeat domain 26b [Source:ZFIN;Acc:ZDB-GENE-041014-277]
27. STARD5 ENSDARG00000076117 251 1.526 - 0.778 - - - 0.748 - - - StAR-related lipid transfer (START) domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-130103-4]
28. zgc:110333 ENSDARG00000040628 3250 1.495 - - 0.768 - - - 0.727 - - zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
29. wu:fa03e10 2390 1.478 - 0.715 - - - - 0.763 - - wu:fa03e10
30. psmc1b ENSDARG00000043561, ENSDARG00000112404 2148 1.466 - - 0.752 - - - 0.714 - - proteasome 26S subunit, ATPase 1b [Source:ZFIN;Acc:ZDB-GENE-040625-69]
31. dscr3 1229 1.453 - - - - - 0.719 - 0.734 - Down syndrome critical region 3
32. ndst2b ENSDARG00000060678 453 0.983 - - 0.983 - - - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
33. Metazoa_SRP_8 Metazoa_SRP_8 153 0.983 - - 0.983 - - - - - -
34. ATF6B 960 0.98 - - 0.980 - - - - - - activating transcription factor 6 beta
35. foxd5 ENSDARG00000042485, ENSDARG00000109712 216 0.98 - - 0.980 - - - - - - forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]
36. CABZ01073032.1 CABZ01073032.1 125 0.979 - - 0.979 - - - - - -
37. CU929394.1 CU929394.1 405 0.978 - - 0.978 - - - - - -
38. CABZ01113061.1 CABZ01113061.1 51 0.976 - - 0.976 - - - - - -
39. CR942805.1 CR942805.1 94 0.976 - - 0.976 - - - - - -
40. zbtb22b ENSDARG00000003251 956 0.976 - - 0.976 - - - - - - zinc finger and BTB domain containing 22b [Source:ZFIN;Acc:ZDB-GENE-010110-4]
41. zgc:158260 ENSDARG00000101703 103 0.976 - - 0.976 - - - - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
42. CMTM8 CMTM8 71 0.976 - - 0.976 - - - - - -
43. wdr66 ENSDARG00000059855 276 0.976 - - 0.976 - - - - - - WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
44. RNase_MRP RNase_MRP 118 0.976 - - 0.976 - - - - - -
45. msgn1 ENSDARG00000070546 188 0.976 - - 0.976 - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
46. il2rb ENSDARG00000075720 116 0.974 - - 0.974 - - - - - - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
47. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 0.974 - - 0.974 - - - - - - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
48. arhgap29b ENSDARG00000017748 812 0.974 - - 0.974 - - - - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
49. CU571255.1 CU571255.1 902 0.973 - - 0.973 - - - - - -
50. TRAK1 212 0.972 - - 0.972 - - - - - - trafficking protein, kinesin binding 1, transcript variant X6
51. BX649554.3_1 BX649554.3_1 1071 0.972 - - 0.972 - - - - - -
52. TRIM14_6 TRIM14_6 342 0.972 - - 0.972 - - - - - -
53. zgc:113265 318 0.971 - - 0.971 - - - - - - zgc:113265, transcript variant X3
54. brf1a ENSDARG00000017835 206 0.971 - - 0.971 - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
55. GPSM3 GPSM3 257 0.97 - - 0.970 - - - - - -
56. antxr1c ENSDARG00000063612 3203 0.97 - - 0.970 - - - - - - ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
57. IER2 IER2 604 0.97 - - 0.970 - - - - - -
58. PLA2G3_1 PLA2G3_1 411 0.97 - - 0.970 - - - - - -
59. F8A3 F8A3 646 0.97 - - 0.970 - - - - - -
60. mxra5b ENSDARG00000076309 190 0.969 - - 0.969 - - - - - - matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
61. rapgef1a ENSDARG00000043593 416 0.969 - - 0.969 - - - - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
62. cpm ENSDARG00000011769, ENSDARG00000113736 1113 0.969 - - 0.969 - - - - - - carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
63. zgc:66484 ENSDARG00000030478 167 0.968 - - 0.968 - - - - - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
64. CAMSAP2 CAMSAP2 109 0.968 - - 0.968 - - - - - -
65. pcdh8 ENSDARG00000006467 317 0.968 - - 0.968 - - - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
66. TATDN3 ENSDARG00000044072 914 0.967 - - 0.967 - - - - - - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
67. twist2 ENSDARG00000078266 499 0.966 - - 0.966 - - - - - - twist2 [Source:ZFIN;Acc:ZDB-GENE-980526-235]
68. pho ENSDARG00000035133 670 0.964 - - 0.964 - - - - - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
69. mns1 ENSDARG00000060169, ENSDARG00000110835 283 0.964 - - 0.964 - - - - - - meiosis-specific nuclear structural 1 [Source:ZFIN;Acc:ZDB-GENE-030521-42]
70. suv39h1b ENSDARG00000055753 1540 0.964 - - 0.964 - - - - - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
71. zgc:113377 335 0.964 - - 0.964 - - - - - - zgc:113377, transcript variant X2
72. trub2 ENSDARG00000028379 783 0.964 - - 0.964 - - - - - - TruB pseudouridine (psi) synthase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040704-41]
73. CABZ01073174.1 CABZ01073174.1 581 0.963 - - 0.963 - - - - - -
74. rnf114 ENSDARG00000009886 725 0.963 - - 0.963 - - - - - - ring finger protein 114 [Source:ZFIN;Acc:ZDB-GENE-040813-1]
75. mphosph10 ENSDARG00000012495 1679 0.963 - - 0.963 - - - - - - M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-2146]
76. b3gnt2b ENSDARG00000091902 4125 0.963 - - 0.963 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
77. zgc:153952 739 0.962 - - 0.962 - - - - - - zgc:153952, transcript variant X1
78. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 0.962 - - 0.962 - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
79. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.962 - - 0.962 - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
80. FBLN1 ENSDARG00000103311 877 0.961 - - 0.961 - - - - - - fibulin 1 [Source:NCBI gene;Acc:30240]
81. alg6 ENSDARG00000017617 483 0.961 - - 0.961 - - - - - - asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-040808-45]
82. rcbtb2 ENSDARG00000090687 1658 0.96 - - 0.960 - - - - - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
83. mfsd2ab ENSDARG00000035909, ENSDARG00000114714 1520 0.96 - - 0.960 - - - - - - major facilitator superfamily domain containing 2ab [Source:NCBI gene;Acc:445176]
84. DACT3 DACT3 766 0.96 - - 0.960 - - - - - -
85. wnt5b ENSDARG00000102464 1662 0.959 - - 0.959 - - - - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
86. tnfaip2a ENSDARG00000043416 688 0.959 - - 0.959 - - - - - - tumor necrosis factor, alpha-induced protein 2a [Source:ZFIN;Acc:ZDB-GENE-041210-301]
87. tmem206 ENSDARG00000012271 508 0.959 - - 0.959 - - - - - - transmembrane protein 206 [Source:ZFIN;Acc:ZDB-GENE-040426-1173]
88. si:ch73-173m3.3 si:ch73-173m3.3 425 0.958 - - 0.958 - - - - - -
89. CYP27A1_1 CYP27A1_1 329 0.958 - - 0.958 - - - - - -
90. layna ENSDARG00000035169 515 0.958 - - 0.958 - - - - - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
91. zfyve21 ENSDARG00000027887 1687 0.957 - - 0.957 - - - - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
92. PLCE1 ENSDARG00000087921 277 0.957 - - 0.957 - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
93. cyp2k16 ENSDARG00000102981 560 0.956 - - 0.956 - - - - - - cytochrome P450, family 2, subfamily K, polypeptide16 [Source:ZFIN;Acc:ZDB-GENE-041010-37]
94. agfg1b ENSDARG00000019526 472 0.955 - - 0.955 - - - - - - ArfGAP with FG repeats 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1520]
95. C18H11orf58 C18H11orf58 1293 0.955 - - 0.955 - - - - - -
96. BX571794.1 ENSDARG00000097619 376 0.954 - - 0.954 - - - - - -
97. jag1b ENSDARG00000013168 1002 0.954 - - 0.954 - - - - - - jagged 1b [Source:ZFIN;Acc:ZDB-GENE-011128-4]
98. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 0.954 - - 0.954 - - - - - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
99. cc2d2a ENSDARG00000090971 363 0.954 - - 0.954 - - - - - - coiled-coil and C2 domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2291]
100. cog2 ENSDARG00000004037 462 0.954 - - 0.954 - - - - - - component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]

There are 1156 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA