Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CAP1

Gene Name Gene ID Reads Annotation
CAP1 ENSGALG00000036294 18598 cyclase associated actin cytoskeleton regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:20040]











Genes with expression patterns similar to CAP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CAP1 ENSGALG00000036294 18598 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclase associated actin cytoskeleton regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:20040]
2. LEPROT ENSGALG00000011047 7132 1.646 - - - - - - 0.842 0.804 - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
3. GTPBP4 ENSGALG00000006703 16183 1.619 - - - - - - 0.831 0.788 - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
4. PARN ENSGALG00000003091 6363 1.614 - - - - - - 0.828 0.786 - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
5. IK ENSGALG00000037172 12100 1.554 - - - - - - 0.720 - - 0.834 IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
6. TOR1AIP1 ENSGALG00000029238 5843 1.548 - - - - - - 0.731 0.817 - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
7. CZH9ORF80 CZH9ORF80 12760 1.507 - - 0.739 - - - 0.768 - - -
8. NUP50 ENSGALG00000014222 11743 1.503 - - - - - - 0.717 0.786 - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
9. CCNK ENSGALG00000011138 6416 1.497 - - - - - - 0.728 0.769 - - cyclin K [Source:NCBI gene;Acc:423446]
10. RNF185 ENSGALG00000006960 5428 1.476 - - - - - - 0.739 0.737 - - ring finger protein 185 [Source:NCBI gene;Acc:416965]
11. PRPF40A ENSGALG00000012526 7724 1.446 - - - - - - 0.711 0.735 - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
12. TM4SF18 4553 1.436 - - - - - - 0.717 0.719 - - transmembrane 4 L six family member 18, transcript variant X2
13. BLMH ENSGALG00000004259 36907 1.433 - - - - - - 0.719 0.714 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
14. AIP ENSGALG00000040247 4166 1.41 - - - - - - 0.710 0.700 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
15. ARPC1A ENSGALG00000004693 11583 0.914 - - - - - - 0.914 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
16. CPSF6 ENSGALG00000019355 7634 0.892 - - - - - - 0.892 - - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
17. WDR61 ENSGALG00000003221 11352 0.876 - - - - - - 0.876 - - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
18. TOMM20 ENSGALG00000035299 23431 0.871 - - - - - - 0.871 - - - translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]
19. RAD21 ENSGALG00000029523 25658 0.869 - - - - - - 0.869 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
20. RPN1 ENSGALG00000005907 25315 0.867 - - - - - - - 0.867 - - ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]
21. CHMP5 ENSGALG00000013160 13347 0.867 - - - - - - 0.867 - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
22. PSMB7 ENSGALG00000001103 42683 0.866 - - - - - - 0.866 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
23. MOSPD1 ENSGALG00000006132 8503 0.865 - - - - - - 0.865 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
24. SRSF6 ENSGALG00000000990 12424 0.865 - - - - - - 0.865 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
25. SBNO1 ENSGALG00000003392 6731 0.864 - - - - - - 0.864 - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
26. NUMB ENSGALG00000009300 4220 0.863 - - - - - - 0.863 - - - NUMB, endocytic adaptor protein [Source:NCBI gene;Acc:395639]
27. MCTS1 ENSGALG00000008517 27514 0.862 - - - - - - 0.862 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
28. MRPL54 ENSGALG00000027611 39450 0.861 - - - - - - 0.861 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
29. NXN 20202 0.86 - - - - - - 0.860 - - - nucleoredoxin, transcript variant X1
30. UBE2F ENSGALG00000003812 13874 0.859 - - - - - - 0.859 - - - ubiquitin conjugating enzyme E2 F (putative) [Source:NCBI gene;Acc:424015]
31. RRP9 ENSGALG00000043359 9747 0.859 - - - - - - 0.859 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
32. CPOX ENSGALG00000015240 5292 0.858 - - - - - - 0.858 - - - coproporphyrinogen oxidase
33. PSMD12 ENSGALG00000026225 17473 0.857 - - - - - - 0.857 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
34. AP2M1 ENSGALG00000008432 16249 0.855 - - - - - - - 0.855 - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
35. RPL7L1 ENSGALG00000011974 20292 0.852 - - - - - - 0.852 - - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
36. GSPT1 15580 0.852 - - - - - - 0.852 - - - G1 to S phase transition 1, transcript variant X1
37. BET1L ENSGALG00000004172 5305 0.852 - - - - - - - 0.852 - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
38. SDF2L1 ENSGALG00000031982 6084 0.852 - - - - - - 0.852 - - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
39. XPO1 ENSGALG00000029476 9526 0.85 - - - - - - 0.850 - - - exportin 1 [Source:NCBI gene;Acc:421192]
40. UBE2G2 ENSGALG00000005667 12689 0.849 - - - - - - 0.849 - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
41. CPSF2 ENSGALG00000010783 5236 0.848 - - - - - - 0.848 - - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
42. FAM207A ENSGALG00000007513 8748 0.844 - - - - - - 0.844 - - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
43. IREB2 ENSGALG00000035462 10659 0.843 - - - - - - - 0.843 - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
44. GLRX5 ENSGALG00000011079 28943 0.843 - - - - - - 0.843 - - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
45. SRRM1 ENSGALG00000001283 23820 0.843 - - - - - - 0.843 - - - serine and arginine repetitive matrix 1 [Source:NCBI gene;Acc:428216]
46. RCHY1 ENSGALG00000023335 12947 0.843 - - - - - - 0.843 - - - ring finger and CHY zinc finger domain containing 1 [Source:NCBI gene;Acc:771726]
47. RER1 ENSGALG00000021683 9074 0.84 - - - - - - - 0.840 - - retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
48. DYNC1H1 ENSGALG00000011330 16400 0.84 - - - - - - 0.840 - - - dynein cytoplasmic 1 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2961]
49. SMU1 ENSGALG00000002014 8136 0.838 - - - - - - 0.838 - - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
50. RCN1 RCN1 11758 0.838 - - - - - - 0.838 - - -
51. SEC63 ENSGALG00000015308 11596 0.838 - - - - - - - 0.838 - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
52. ZFR ENSGALG00000003235 8466 0.837 - - - - - - 0.837 - - - zinc finger RNA binding protein, transcript variant X3
53. RBBP4 ENSGALG00000003522 72455 0.837 - - - - - - 0.837 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
54. CDC20 ENSGALG00000009971 11197 0.837 - - - - - - 0.837 - - - cell division cycle 20 [Source:NCBI gene;Acc:424563]
55. SEC22B ENSGALG00000039704 16080 0.836 - - - - - - 0.836 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
56. SPCS3 ENSGALG00000010839 19106 0.836 - - - - - - 0.836 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
57. PNRC2 ENSGALG00000004122 19228 0.833 - - - - - - 0.833 - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
58. UQCRC1 ENSGALG00000005789 23201 0.833 - - - - - - 0.833 - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
59. SRP9 ENSGALG00000026009 12418 0.832 - - - - - - 0.832 - - - signal recognition particle 9 [Source:NCBI gene;Acc:770243]
60. SRSF5 ENSGALG00000009421 8502 0.83 - - - - - - 0.830 - - - serine and arginine rich splicing factor 5 [Source:NCBI gene;Acc:423258]
61. FKBP12 FKBP12 64317 0.828 - - - - - - 0.828 - - -
62. VPS35 ENSGALG00000004375 8059 0.827 - - - - - - 0.827 - - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
63. PHAX ENSGALG00000014691 8114 0.826 - - - - - - 0.826 - - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
64. KCTD2 ENSGALG00000007934 15085 0.825 - - - - - - 0.825 - - - potassium channel tetramerization domain containing 2 [Source:NCBI gene;Acc:422116]
65. HSDL2 ENSGALG00000015663 8966 0.824 - - - - - - 0.824 - - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]
66. TPD52L2 ENSGALG00000004683 13624 0.822 - - - - - - 0.822 - - - tumor protein D52 like 2 [Source:NCBI gene;Acc:419257]
67. PTP4A2 ENSGALG00000003265 24826 0.822 - - - - - - 0.822 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
68. ASF1A ENSGALG00000014887 11319 0.822 - - - - - - 0.822 - - - anti-silencing function 1A histone chaperone [Source:NCBI gene;Acc:723780]
69. GLRX3 ENSGALG00000010464 22578 0.821 - - - - - - 0.821 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
70. SNRNP40 ENSGALG00000000615 32298 0.821 - - - - - - 0.821 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
71. NDUFAF1 ENSGALG00000008587 14779 0.821 - - - - - - 0.821 - - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
72. DTYMK ENSGALG00000006305 11736 0.82 - - - - - - 0.820 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
73. MAGT1 ENSGALG00000007861 9105 0.82 - - - - - - 0.820 - - - magnesium transporter 1 [Source:NCBI gene;Acc:422332]
74. CASP3 ENSGALG00000010638 11572 0.819 - - - - - - 0.819 - - - caspase 3 [Source:NCBI gene;Acc:395476]
75. TRIP12 ENSGALG00000002929 11713 0.819 - - - - - - 0.819 - - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
76. PDHA1 ENSGALG00000016430 7070 0.819 - - - - - - 0.819 - - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
77. RNF219 ENSGALG00000016911 4458 0.818 - - - - - - 0.818 - - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
78. MEMO1 ENSGALG00000010624 6722 0.818 - - - - - - 0.818 - - - mediator of cell motility 1 [Source:NCBI gene;Acc:421483]
79. KDELR2 ENSGALG00000040793 29669 0.817 - - - - - - 0.817 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
80. RRAS2 ENSGALG00000005998 6467 0.817 - - - - - - 0.817 - - - RAS related 2 [Source:NCBI gene;Acc:423062]
81. EIF4E2 ENSGALG00000007919 8163 0.816 - - - - - - 0.816 - - - eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:HGNC:3293]
82. PTTG1 17936 0.816 - - - - - - - 0.816 - - pituitary tumor-transforming 1, transcript variant X1
83. EIF4A2 ENSGALG00000008684 58507 0.816 - - - - - - 0.816 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
84. SSR3 ENSGALG00000028683 24334 0.816 - - - - - - 0.816 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
85. QTRTD1 QTRTD1 10765 0.816 - - - - - - 0.816 - - -
86. MTMR8 ENSGALG00000007590 6022 0.815 - - - - - - - 0.815 - - myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
87. RAD23B ENSGALG00000015540 10828 0.815 - - - - - - 0.815 - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
88. TLK1 ENSGALG00000009569 5446 0.814 - - - - - - 0.814 - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
89. GNL3 ENSGALG00000001613 10911 0.814 - - - - - - 0.814 - - - G protein nucleolar 3 [Source:HGNC Symbol;Acc:HGNC:29931]
90. GAS2 ENSGALG00000003655 2672 0.814 - - - - - - - 0.814 - - growth arrest specific 2 [Source:NCBI gene;Acc:422970]
91. SLC30A4 ENSGALG00000005703 5696 0.813 - - - - - - 0.813 - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
92. RPL35 ENSGALG00000035677 252113 0.813 - - - - - - 0.813 - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
93. SENP6 ENSGALG00000015901 8013 0.813 - - - - - - - 0.813 - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
94. LYPLA1 ENSGALG00000040421 14720 0.813 - - - - - - 0.813 - - - lysophospholipase I [Source:HGNC Symbol;Acc:HGNC:6737]
95. SNX4 ENSGALG00000012052 11634 0.812 - - - - - - 0.812 - - - sorting nexin 4 [Source:HGNC Symbol;Acc:HGNC:11175]
96. MRPL14 ENSGALG00000010285 11820 0.811 - - - - - - 0.811 - - - mitochondrial ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:14279]
97. ALDH5A1 ENSGALG00000032544 4924 0.811 - - - - - - 0.811 - - - aldehyde dehydrogenase 5 family member A1 [Source:HGNC Symbol;Acc:HGNC:408]
98. CSK ENSGALG00000031270 11541 0.811 - - - - - - 0.811 - - - C-terminal Src kinase [Source:NCBI gene;Acc:396396]
99. ZSWIM7 ENSGALG00000023686 6459 0.811 - - - - - - - 0.811 - - zinc finger SWIM-type containing 7 [Source:NCBI gene;Acc:417596]
100. RFC3 ENSGALG00000017064 7011 0.809 - - - - - - 0.809 - - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]

There are 389 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA