Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CALR3

Gene Name Gene ID Reads Annotation
CALR3 ENSGALG00000003914 8 calreticulin 3 [Source:HGNC Symbol;Acc:HGNC:20407]











Genes with expression patterns similar to CALR3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CALR3 ENSGALG00000003914 8 5 - - 1.000 1.000 - 1.000 1.000 - - 1.000 calreticulin 3 [Source:HGNC Symbol;Acc:HGNC:20407]
2. ACSS1L ENSGALG00000010225 5 2 - - - 1.000 - - 1.000 - - - acyl-CoA synthetase short-chain family member 1-like, transcript variant X3
3. ENSGALG00000009041 ENSGALG00000009041 27 1.97 - - 0.970 - - 1.000 - - - -
4. LRRC55 ENSGALG00000029130 21 1.939 - - - 1.000 - 0.939 - - - - leucine rich repeat containing 55 [Source:HGNC Symbol;Acc:HGNC:32324]
5. MCT2L ENSGALG00000007596 127 1.92 - - 0.920 - - 1.000 - - - - monocarboxylate transporter 2-like, transcript variant X5
6. FEM1B ENSGALG00000028906 4 1.885 - - 0.885 - - 1.000 - - - - fem-1 homolog B [Source:NCBI gene;Acc:415559]
7. SLC13A5 ENSGALG00000005995 23 1.742 - - 0.742 - - 1.000 - - - - solute carrier family 13 member 5 [Source:HGNC Symbol;Acc:HGNC:23089]
8. TAF5L ENSGALG00000011098 17 1.722 - - - - - 0.722 1.000 - - - TATA-box binding protein associated factor 5 like [Source:HGNC Symbol;Acc:HGNC:17304]
9. CCDC73 ENSGALG00000012103 17 1.71 - - - - - - 1.000 - - 0.710 coiled-coil domain containing 73 [Source:HGNC Symbol;Acc:HGNC:23261]
10. ENSGALG00000020661 ENSGALG00000020661 1 1 - - - - - 1.000 - - - -
11. KCNH4 ENSGALG00000003354 0 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily H member 4 [Source:HGNC Symbol;Acc:HGNC:6253]
12. CDK19 ENSGALG00000015051 26 1 - - - - - - 1.000 - - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
13. gga-mir-22 ENSGALG00000024507 2 1 - - - - - 1.000 - - - - gga-mir-22 [Source:miRBase;Acc:MI0006982]
14. SPG20 22 1 - - - - - - 1.000 - - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
15. EVI2A ENSGALG00000039084 13 1 - - - - - 1.000 - - - - ecotropic viral integration site 2A [Source:NCBI gene;Acc:776037]
16. LZTS3 ENSGALG00000016001 3 1 - - - - - 1.000 - - - - leucine zipper tumor suppressor family member 3 [Source:HGNC Symbol;Acc:HGNC:30139]
17. GABRA5 ENSGALG00000016744 12 1 - - - - - - 1.000 - - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
18. GALNT9 ENSGALG00000002242 219 1 - - - - - - 1.000 - - - polypeptide N-acetylgalactosaminyltransferase 9 [Source:HGNC Symbol;Acc:HGNC:4131]
19. AGO2 ENSGALG00000040957 25 1 - - - - - 1.000 - - - - argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
20. IL8 ENSGALG00000026098 16 1 - - - - - 1.000 - - - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
21. PLEKHG7 ENSGALG00000011277 3 1 - - - - - 1.000 - - - - pleckstrin homology and RhoGEF domain containing G7 [Source:HGNC Symbol;Acc:HGNC:33829]
22. FIP1L1 ENSGALG00000013943 15 1 - - - - - - 1.000 - - - factor interacting with PAPOLA and CPSF1, transcript variant X5
23. UPK3A ENSGALG00000014227 7 1 - - - - - 1.000 - - - - uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
24. MIER2 ENSGALG00000001108 25 1 - - - - - - 1.000 - - - MIER family member 2 [Source:HGNC Symbol;Acc:HGNC:29210]
25. NEGR1 ENSGALG00000011350 6 1 - - - - - 1.000 - - - - neuronal growth regulator 1 [Source:NCBI gene;Acc:395662]
26. PAH ENSGALG00000012754 15 1 - - - - - - 1.000 - - - phenylalanine hydroxylase [Source:NCBI gene;Acc:408024]
27. LRCH1 ENSGALG00000016990 17 1 - - - - - 1.000 - - - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
28. AK5 ENSGALG00000031652 12 1 - - - - - 1.000 - - - - adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]
29. LOC100858797 ENSGALG00000027167 7 1 - - - 1.000 - - - - - - feather keratin 1-like, transcript variant X1
30. ASIP ENSGALG00000039101 29 1 - - - - - 1.000 - - - - agouti signaling protein [Source:NCBI gene;Acc:419147]
31. PCGF3 ENSGALG00000015333 7 1 - - - - - - 1.000 - - - polycomb group ring finger 3 [Source:HGNC Symbol;Acc:HGNC:10066]
32. SLC22A16 ENSGALG00000015055 21 1 - - - - - - 1.000 - - - solute carrier family 22 member 16 [Source:HGNC Symbol;Acc:HGNC:20302]
33. HMGCS2 ENSGALG00000002960 54 1 - - - 1.000 - - - - - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
34. TMEM150A ENSGALG00000005649 1 1 - - - - - 1.000 - - - - transmembrane protein 150A
35. EPHA8 ENSGALG00000021567 3 1 - - - - - 1.000 - - - - EPH receptor A8 [Source:HGNC Symbol;Acc:HGNC:3391]
36. DAAM1 ENSGALG00000012017 81 1 - - - - - - 1.000 - - - Gallus gallus dishevelled associated activator of morphogenesis 1 (DAAM1), mRNA. [Source:RefSeq mRNA;Acc:NM_001322368]
37. HPGDS ENSGALG00000010402 343 1 - - - - - 1.000 - - - - hematopoietic prostaglandin D synthase [Source:NCBI gene;Acc:395863]
38. DHX58 ENSGALG00000023821 15 1 - - - - - 1.000 - - - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
39. ENSGALG00000028239 ENSGALG00000028239 0 1 - - - - - 1.000 - - - -
40. EML5 ENSGALG00000010639 25 1 - - - - - - 1.000 - - - echinoderm microtubule associated protein like 5, transcript variant X1
41. VWA5A ENSGALG00000028815 19 1 - - - - - - 1.000 - - - von Willebrand factor A domain containing 5A, transcript variant X5
42. CRK ENSGALG00000002656 15 1 - - - - - - 1.000 - - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
43. NFIL3 ENSGALG00000015209 15 1 - - - - - 1.000 - - - - nuclear factor, interleukin 3 regulated [Source:NCBI gene;Acc:395326]
44. MGAT3 ENSGALG00000036743 5 1 - - - - - - 1.000 - - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
45. HHATL ENSGALG00000005297 0 1 - - - - - 1.000 - - - - hedgehog acyltransferase-like [Source:NCBI gene;Acc:420391]
46. NLRC3 ENSGALG00000033278 11 1 - - - - - 1.000 - - - - NLR family CARD domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29889]
47. FBXL16 ENSGALG00000002443 11 1 - - - - - - 1.000 - - - F-box and leucine rich repeat protein 16 [Source:NCBI gene;Acc:416405]
48. PKD1 ENSGALG00000005714 0 1 - - - - - 1.000 - - - - polycystin 1, transient receptor potential channel interacting [Source:HGNC Symbol;Acc:HGNC:9008]
49. THRB ENSGALG00000011294 7 1 - - - - - - 1.000 - - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
50. KIAA1841 ENSGALG00000007825 22 1 - - - - - 1.000 - - - - KIAA1841 [Source:NCBI gene;Acc:421196]
51. ARHGAP44 ENSGALG00000001311 0 1 - - - - - 1.000 - - - - Rho GTPase activating protein 44, transcript variant X4
52. FAM184B ENSGALG00000041854 43 1 - - - - - - 1.000 - - - family with sequence similarity 184 member B [Source:HGNC Symbol;Acc:HGNC:29235]
53. LOC423752 ENSGALG00000020899 17 1 - - - - - - 1.000 - - - uncharacterized LOC423752, transcript variant X1
54. ENSGALG00000005511 ENSGALG00000005511 7 1 - - - - - - 1.000 - - -
55. MED13L ENSGALG00000008238 27 1 - - - - - - 1.000 - - - mediator complex subunit 13 like [Source:HGNC Symbol;Acc:HGNC:22962]
56. FGF23 ENSGALG00000027791 9 1 - - - - - 1.000 - - - - fibroblast growth factor 23 [Source:HGNC Symbol;Acc:HGNC:3680]
57. LEPR ENSGALG00000011058 4 1 - - - - - 1.000 - - - - leptin receptor [Source:NCBI gene;Acc:374223]
58. UNC13B ENSGALG00000002165 3 1 - - - - - 1.000 - - - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
59. BMPR1A ENSGALG00000002003 20 1 - - - - - - 1.000 - - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
60. PABPC1L ENSGALG00000004123 2 1 - - - - - 1.000 - - - - poly(A) binding protein cytoplasmic 1 like [Source:HGNC Symbol;Acc:HGNC:15797]
61. NRAP ENSGALG00000008914 24 1 - - - - - 1.000 - - - - nebulin related anchoring protein [Source:HGNC Symbol;Acc:HGNC:7988]
62. FAM96A ENSGALG00000026448 41 1 - - - - - - 1.000 - - - family with sequence similarity 96 member A [Source:NCBI gene;Acc:415571]
63. ENSGALG00000025736 ENSGALG00000025736 3 1 - - - - - 1.000 - - - -
64. IL18RAP ENSGALG00000016788 1 1 - - - - - - 1.000 - - - interleukin 18 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5989]
65. U5 U5 1 1 - - - - - 1.000 - - - -
66. GPR174 ENSGALG00000004111 16 1 - - - - - 1.000 - - - - G protein-coupled receptor 174 [Source:NCBI gene;Acc:422146]
67. ENSGALG00000004753 ENSGALG00000004753 63 1 - - - - - 1.000 - - - -
68. DD1 DD1 4 1 - - - - - 1.000 - - - -
69. ENSGALG00000020578 ENSGALG00000020578 25 1 - - - 1.000 - - - - - -
70. TRIO ENSGALG00000031495 233 1 - - - - - - 1.000 - - - trio Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:12303]
71. P4HTM ENSGALG00000006937 33 1 - - - - - - 1.000 - - - prolyl 4-hydroxylase, transmembrane [Source:HGNC Symbol;Acc:HGNC:28858]
72. WDR52 WDR52 37 1 - - - - - - 1.000 - - -
73. SYCP1 ENSGALG00000002511 13 0.984 - - 0.984 - - - - - - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
74. SLC6A2 ENSGALG00000003560 108 0.983 - - - - - 0.983 - - - - solute carrier family 6 member 2 [Source:NCBI gene;Acc:395458]
75. MAP4 36 0.98 - - - 0.980 - - - - - - microtubule associated protein 4, transcript variant X12
76. TNFAIP3 ENSGALG00000013861 11 0.97 - - 0.970 - - - - - - - TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
77. LOXHD1 ENSGALG00000037829 3 0.97 - - 0.970 - - - - - - - lipoxygenase homology domains 1 [Source:HGNC Symbol;Acc:HGNC:26521]
78. CLRN2 ENSGALG00000027453 3 0.97 - - 0.970 - - - - - - - clarin 2 [Source:HGNC Symbol;Acc:HGNC:33939]
79. POMGNT2 ENSGALG00000011518 36 0.97 - - 0.970 - - - - - - - protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
80. ZMAT4 ENSGALG00000003470 2 0.97 - - 0.970 - - - - - - - zinc finger matrin-type 4 [Source:HGNC Symbol;Acc:HGNC:25844]
81. SNX8 ENSGALG00000004255 4 0.97 - - 0.970 - - - - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
82. FHL2 ENSGALG00000016797 11 0.97 - - 0.970 - - - - - - - four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
83. TLL2 ENSGALG00000005519 10 0.97 - - 0.970 - - - - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
84. ENSGALG00000026347 ENSGALG00000026347 2 0.97 - - 0.970 - - - - - - -
85. CNGA2 ENSGALG00000007282 2 0.97 - - 0.970 - - - - - - - cyclic nucleotide gated channel alpha 2 [Source:HGNC Symbol;Acc:HGNC:2149]
86. LRP3 ENSGALG00000004853 13 0.97 - - 0.970 - - - - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
87. GPD1L2 ENSGALG00000012061 31 0.97 - - 0.970 - - - - - - - glycerol-3-phosphate dehydrogenase 1-like 2
88. GAN ENSGALG00000013437 11 0.97 - - 0.970 - - - - - - - gigaxonin [Source:HGNC Symbol;Acc:HGNC:4137]
89. LRRC49 ENSGALG00000004059 29 0.965 - - 0.965 - - - - - - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
90. KIAA0319 ENSGALG00000041273 10 0.963 - - - - - 0.963 - - - - KIAA0319 [Source:HGNC Symbol;Acc:HGNC:21580]
91. SLC17A6 ENSGALG00000039254 16 0.953 - - 0.953 - - - - - - - solute carrier family 17 member 6 [Source:NCBI gene;Acc:422971]
92. HOXB13 ENSGALG00000033154 71 0.951 - - 0.951 - - - - - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
93. U4atac U4atac 23 0.946 - - 0.946 - - - - - - -
94. CCR5 ENSGALG00000037077 23 0.944 - - - 0.944 - - - - - - C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
95. TMEM63B ENSGALG00000010282 7 0.943 - - 0.943 - - - - - - - transmembrane protein 63B [Source:HGNC Symbol;Acc:HGNC:17735]
96. GNAQ ENSGALG00000015177 82 0.942 - - - 0.942 - - - - - - G protein subunit alpha q [Source:NCBI gene;Acc:427262]
97. HEMK1 ENSGALG00000002253 40 0.938 - - - 0.938 - - - - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
98. SERAC1 ENSGALG00000013732 24 0.936 - - 0.936 - - - - - - - serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
99. USP19 ENSGALG00000006824 44 0.935 - - - 0.935 - - - - - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
100. ENSGALG00000001323 ENSGALG00000001323 3 0.931 - - 0.931 - - - - - - -

There are 201 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA