Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CALD1

Gene Name Gene ID Reads Annotation
CALD1 ENSGALG00000033471 8950 caldesmon 1 [Source:NCBI gene;Acc:373965]











Genes with expression patterns similar to CALD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CALD1 ENSGALG00000033471 8950 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 caldesmon 1 [Source:NCBI gene;Acc:373965]
2. MYH9 ENSGALG00000043092 3026 1.54 - - - - - - - 0.740 0.800 - myosin, heavy chain 9, non-muscle [Source:NCBI gene;Acc:396469]
3. ANO1 ENSGALG00000041808 5149 1.495 - - - - - 0.769 - 0.726 - - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
4. EGFLAM ENSGALG00000003726 4588 1.432 - - - - - - - 0.711 - 0.721 EGF like, fibronectin type III and laminin G domains, transcript variant X1
5. PTBP1 ENSGALG00000001962 66983 0.882 - - - - - - - - 0.882 - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
6. TANC1 ENSGALG00000012570 4196 0.843 - - - - - - - - 0.843 - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29364]
7. TGFBR3 ENSGALG00000006038 2951 0.838 - - - - - - - 0.838 - - transforming growth factor beta receptor 3 [Source:NCBI gene;Acc:374251]
8. PLK2 ENSGALG00000014725 1736 0.827 - - - - - - - - 0.827 - polo like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19699]
9. SPARC ENSGALG00000004184 36410 0.821 - - - - - - - - 0.821 - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
10. KCNJ8 ENSGALG00000026373 1263 0.818 - - - - - - - 0.818 - - potassium voltage-gated channel subfamily J member 8 [Source:NCBI gene;Acc:395973]
11. TPM4 ENSGALG00000002563 15621 0.816 - - - - - - - - 0.816 - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
12. MMP2 ENSGALG00000003580 13120 0.816 - - - - - - - 0.816 - - matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
13. FBN2 ENSGALG00000014686 4538 0.811 - - - - - - - - 0.811 - fibrillin 2 [Source:HGNC Symbol;Acc:HGNC:3604]
14. CD9 ENSGALG00000017274 960 0.809 - - - - - - - 0.809 - - CD9 molecule [Source:NCBI gene;Acc:395527]
15. F5 ENSGALG00000029298 1850 0.808 - - - - - - - - 0.808 - coagulation factor V [Source:HGNC Symbol;Acc:HGNC:3542]
16. CEP170 ENSGALG00000010733 4177 0.799 - - - - - - - - 0.799 - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
17. PDZRN4 ENSGALG00000009530 832 0.798 - - - - - - - - 0.798 - PDZ domain containing ring finger 4 [Source:HGNC Symbol;Acc:HGNC:30552]
18. MBSP MBSP 5634 0.796 - - - - - - - - 0.796 -
19. PXN ENSGALG00000007247 615 0.796 - - - - - - - - 0.796 - paxillin [Source:NCBI gene;Acc:395832]
20. EIF3A ENSGALG00000009328 39982 0.795 - - - - - - - - 0.795 - eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
21. THOC2 ENSGALG00000008507 9501 0.794 0.794 - - - - - - - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
22. CAMK4 ENSGALG00000000244 151 0.794 - - - - - - - - 0.794 - calcium/calmodulin dependent protein kinase IV [Source:NCBI gene;Acc:723973]
23. TMED3 ENSGALG00000008272 2838 0.793 - - - - - - - 0.793 - - transmembrane p24 trafficking protein 3 [Source:NCBI gene;Acc:415580]
24. OSBPL5 ENSGALG00000006401 3555 0.788 - - - - - - - 0.788 - - oxysterol binding protein like 5 [Source:HGNC Symbol;Acc:HGNC:16392]
25. ATRX ENSGALG00000007843 34172 0.787 0.787 - - - - - - - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
26. IQGAP1 ENSGALG00000030162 1047 0.785 - - - - - - - - 0.785 - IQ motif containing GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:6110]
27. PCNX PCNX 110 0.785 - - - - - - - - 0.785 -
28. SH3TC1 ENSGALG00000015568 484 0.781 - - - - - - - - 0.781 - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
29. GPX3 ENSGALG00000004521 10856 0.78 - - 0.780 - - - - - - - glutathione peroxidase 3 [Source:NCBI gene;Acc:427638]
30. S100A11 ENSGALG00000036711 23454 0.78 - - - - - - - - 0.780 - S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
31. SNORA73 SNORA73 1644 0.777 - - - - - - - - 0.777 -
32. ANKRD50 ENSGALG00000011831 2870 0.776 - - - - - - - - 0.776 - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
33. SH3D19 ENSGALG00000010081 52 0.775 - - - - - - - - 0.775 - SH3 domain containing 19 [Source:HGNC Symbol;Acc:HGNC:30418]
34. GALM ENSGALG00000013828 1546 0.774 - - - - - - - - 0.774 - galactose mutarotase [Source:HGNC Symbol;Acc:HGNC:24063]
35. PRKCDBP PRKCDBP 2249 0.774 - - - - - - - 0.774 - -
36. HAPLN1 ENSGALG00000015627 14942 0.774 - - - - - - - - 0.774 - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
37. RIN3 ENSGALG00000010806 729 0.772 - - - - - - - - 0.772 - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
38. KRT19 ENSGALG00000019719 38711 0.771 - - - - - - - - 0.771 - keratin 19 [Source:NCBI gene;Acc:395861]
39. ST6GALNAC4 ENSGALG00000005063 1056 0.769 - - - - - - - - 0.769 - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [Source:NCBI gene;Acc:395182]
40. CREB5 ENSGALG00000038265 92 0.765 - - - - - - - - 0.765 - cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
41. MTSS1 ENSGALG00000041969 1312 0.764 - - - - - - - - 0.764 - MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
42. GLIPR2 ENSGALG00000028821 5791 0.763 - - - - - - - 0.763 - - GLI pathogenesis related 2, transcript variant X2
43. CCDC80 ENSGALG00000015193 1387 0.761 - - - - - - - - 0.761 - coiled-coil domain containing 80 [Source:NCBI gene;Acc:395074]
44. EMP2 ENSGALG00000027058 3925 0.761 - - - - - - - 0.761 - - epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
45. SLC45A3 ENSGALG00000000703 85 0.759 - - - - - - - - 0.759 - solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
46. AFG3L2 ENSGALG00000013853 1138 0.757 - - - - - - - - 0.757 - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
47. MAP3K5 ENSGALG00000013892 565 0.757 - - - - - - - - 0.757 - mitogen-activated protein kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6857]
48. CHRNA7 ENSGALG00000004096 107 0.756 - - - - - - - - 0.756 - cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:374001]
49. GM2A ENSGALG00000027534 3141 0.756 - - - - - - - 0.756 - - GM2 ganglioside activator [Source:HGNC Symbol;Acc:HGNC:4367]
50. LPAR4 ENSGALG00000004121 2543 0.756 - - - - - - - 0.756 - - lysophosphatidic acid receptor 4 [Source:NCBI gene;Acc:422149]
51. DDRGK1 ENSGALG00000016003 9098 0.755 - - - - - - - - 0.755 - DDRGK domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16110]
52. CDA ENSGALG00000007382 1544 0.754 - - - - - - - - 0.754 - cytidine deaminase [Source:NCBI gene;Acc:771849]
53. SNCAIP ENSGALG00000005330 2425 0.753 - - - - - - - - 0.753 - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
54. GDPD2 ENSGALG00000005842 86 0.752 - - - - - - - - 0.752 - glycerophosphodiester phosphodiesterase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25974]
55. SLC39A10 ENSGALG00000007777 272 0.751 - - - - - - - - 0.751 - solute carrier family 39 member 10 [Source:HGNC Symbol;Acc:HGNC:20861]
56. HEPH ENSGALG00000037410 640 0.751 - - - - - - - - 0.751 - hephaestin [Source:HGNC Symbol;Acc:HGNC:4866]
57. ENSGALG00000006730 ENSGALG00000006730 3695 0.751 - - - - - - - - 0.751 -
58. PCDH11X ENSGALG00000006851 314 0.751 - - - - - - - - 0.751 - protocadherin 11 X-linked, transcript variant X1
59. SH3BGRL ENSGALG00000007128 18708 0.75 - - - - - - - 0.750 - - SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
60. L3HYPDH ENSGALG00000012011 2212 0.749 - - - - - - - - 0.749 - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
61. ENSGALG00000003515 ENSGALG00000003515 1003 0.749 - - - - - - - - 0.749 -
62. KIAA1217 ENSGALG00000007766 144 0.748 - - - - - - - - 0.748 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
63. IQCA1 ENSGALG00000003980 87 0.747 - - - - - - - - 0.747 - IQ motif containing with AAA domain 1 [Source:HGNC Symbol;Acc:HGNC:26195]
64. BACH1 ENSGALG00000015828 114 0.745 - - - - - - - - 0.745 - BTB domain and CNC homolog 1 [Source:HGNC Symbol;Acc:HGNC:935]
65. GNS ENSGALG00000009856 3045 0.745 - - - - - - - - 0.745 - glucosamine (N-acetyl)-6-sulfatase [Source:NCBI gene;Acc:417829]
66. GSN ENSGALG00000001446 5605 0.745 - - - - - - - 0.745 - - gelsolin [Source:NCBI gene;Acc:395774]
67. NTL ENSGALG00000005156 278 0.745 - - - - - - - - 0.745 - neurotrypsin-like, transcript variant X7
68. APOA1 ENSGALG00000007114 10215 0.744 - - - - - - 0.744 - - - apolipoprotein A1 [Source:NCBI gene;Acc:396536]
69. PCLO 249 0.743 - - - - - - - - 0.743 - piccolo presynaptic cytomatrix protein
70. ITSN1 ENSGALG00000036677 5727 0.743 0.743 - - - - - - - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
71. U3 U3 1604 0.743 - - - - - - - 0.743 - -
72. KRT14 ENSGALG00000003690 682 0.742 - - - - - - - - 0.742 - keratin 14 [Source:NCBI gene;Acc:408039]
73. SS18 ENSGALG00000015119 4687 0.741 - - - - - - - - 0.741 - SS18, nBAF chromatin remodeling complex subunit [Source:NCBI gene;Acc:421085]
74. AGTRAP ENSGALG00000004623 3184 0.74 - - - - - - - - 0.740 - angiotensin II receptor associated protein [Source:HGNC Symbol;Acc:HGNC:13539]
75. NAP1L1 ENSGALG00000010238 14506 0.74 0.740 - - - - - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
76. KIF26A ENSGALG00000011581 11285 0.739 - - - - - - - 0.739 - - kinesin family member 26A [Source:HGNC Symbol;Acc:HGNC:20226]
77. SDC3 ENSGALG00000035184 14096 0.739 - - - - - - - 0.739 - - syndecan 3 [Source:NCBI gene;Acc:396343]
78. ABCC8 ENSGALG00000006172 41 0.739 - - - - - - - - 0.739 - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
79. VASN 583 0.737 - - - - - - - - 0.737 - vasorin, transcript variant X1
80. MDN1 ENSGALG00000015733 2352 0.737 - - - - - - - - 0.737 - midasin AAA ATPase 1, transcript variant X1
81. RRM2B ENSGALG00000040921 600 0.737 - - - - - - - - 0.737 - ribonucleotide reductase regulatory TP53 inducible subunit M2B [Source:HGNC Symbol;Acc:HGNC:17296]
82. ZNF618 ENSGALG00000008886 1326 0.736 - - - - - - - - 0.736 - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
83. RBBP6 ENSGALG00000006043 9708 0.736 0.736 - - - - - - - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
84. ECM2 ENSGALG00000004695 375 0.735 - - - - - - - - 0.735 - extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:3154]
85. DCP1B 1306 0.734 - - - - - - - - 0.734 - decapping mRNA 1B
86. MCEE ENSGALG00000003913 1527 0.734 - - - - - - - 0.734 - - methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]
87. KLHL3 ENSGALG00000039124 1302 0.733 - - - - - - - - 0.733 - kelch like family member 3 [Source:HGNC Symbol;Acc:HGNC:6354]
88. FGF12 ENSGALG00000036971 2631 0.733 - - - - - - - 0.733 - - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
89. EEF2 ENSGALG00000033884 62036 0.733 0.733 - - - - - - - - - eukaryotic translation elongation factor 2 [Source:NCBI gene;Acc:396325]
90. LYVE1 ENSGALG00000005643 1230 0.732 - - - - - - - 0.732 - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
91. DISC1 ENSGALG00000039349 1348 0.732 - - - - - - - 0.732 - - DISC1 scaffold protein [Source:HGNC Symbol;Acc:HGNC:2888]
92. FLOT2 ENSGALG00000031216 1003 0.731 - - - - - - - - 0.731 - flotillin 2 [Source:NCBI gene;Acc:417579]
93. C1orf131 C1orf131 141 0.731 - - - - - - - - 0.731 -
94. SFSWAP ENSGALG00000002487 9977 0.731 - - - - - - - - 0.731 - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
95. TRAF3IP2 ENSGALG00000015026 26 0.73 - - - - - 0.730 - - - - TRAF3 interacting protein 2, transcript variant X1
96. TOX2 ENSGALG00000003106 2472 0.73 - - - - - - - 0.730 - - TOX high mobility group box family member 2, transcript variant X1
97. RALY ENSGALG00000033696 1110 0.73 - - - - - - - 0.730 - - RALY heterogeneous nuclear ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:15921]
98. MYO16 ENSGALG00000016837 1381 0.73 - - - - - - - 0.730 - - myosin XVI [Source:HGNC Symbol;Acc:HGNC:29822]
99. DDX46 ENSGALG00000006404 8765 0.729 0.729 - - - - - - - - - DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]
100. SLC25A16 ENSGALG00000004065 2373 0.729 - - - - - - - - 0.729 - solute carrier family 25 member 16 [Source:HGNC Symbol;Acc:HGNC:10986]

There are 90 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA