Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CALCOCO2

Gene Name Gene ID Reads Annotation
CALCOCO2 ENSGALG00000001525 3121 calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]











Genes with expression patterns similar to CALCOCO2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CALCOCO2 ENSGALG00000001525 3121 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
2. DTX2 ENSGALG00000001905 1475 1.645 - - - - - - 0.837 - - 0.808 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
3. KTN1 ENSGALG00000012137 4058 1.643 - - - - - - - 0.821 0.822 - kinectin 1 [Source:NCBI gene;Acc:396335]
4. GARNL3 ENSGALG00000000847 3423 1.639 - - - - - - 0.904 - - 0.735 GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
5. ATL1 ENSGALG00000012339 3789 1.637 - - - - - - 0.800 - - 0.837 atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
6. GHITM ENSGALG00000021262 7159 1.633 - - - - - - 0.870 0.763 - - growth hormone inducible transmembrane protein [Source:NCBI gene;Acc:423621]
7. TTI1 ENSGALG00000006791 1218 1.629 - - - - - - 0.829 - - 0.800 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
8. BSDC1 ENSGALG00000003405 3701 1.628 - - - - - - 0.838 - - 0.790 BSD domain containing 1 [Source:NCBI gene;Acc:419658]
9. NFRKB ENSGALG00000001306 4469 1.617 - - - - - - 0.858 0.759 - - nuclear factor related to kappaB binding protein [Source:NCBI gene;Acc:419730]
10. SRA1 ENSGALG00000040453 266 1.616 - - - - - - 0.810 - - 0.806 steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
11. NNT ENSGALG00000014869 8496 1.609 - - - - - - 0.892 - - 0.717 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
12. FREM3 ENSGALG00000020561 1824 1.604 - - - - - - 0.882 - 0.722 - FRAS1 related extracellular matrix 3
13. UFL1 ENSGALG00000015580 3845 1.601 - - - - - - 0.818 0.783 - - UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
14. WWC1 ENSGALG00000001826 4666 1.598 - - - - - - 0.766 - - 0.832 WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
15. EPB41L1 ENSGALG00000034171 3616 1.596 - - - - - - 0.878 0.718 - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
16. ATP5J 14451 1.59 - - - - - - 0.785 0.805 - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
17. PWP1 ENSGALG00000012631 10536 1.588 - - - - - - 0.852 0.736 - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
18. KATNA1 ENSGALG00000012378 1745 1.579 - - - - - - 0.848 0.731 - - katanin catalytic subunit A1 [Source:NCBI gene;Acc:421626]
19. OGFOD3 ENSGALG00000001618 2438 1.577 - - - - - - - - 0.837 0.740 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
20. TJP1 ENSGALG00000042552 3081 1.573 - - - - - - 0.858 0.715 - - tight junction protein 1 [Source:HGNC Symbol;Acc:HGNC:11827]
21. POLR3F ENSGALG00000008749 5645 1.571 - - - - - - 0.830 - 0.741 - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
22. MITF ENSGALG00000039583 865 1.57 - - - - - - 0.803 - - 0.767 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
23. GPX8 ENSGALG00000026704 4497 1.565 - - - - - - 0.818 0.747 - - glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
24. BTBD7 4136 1.565 - - - - - - 0.846 0.719 - - BTB domain containing 7, transcript variant X2
25. CEPT1 ENSGALG00000000142 4219 1.561 - - - - - - 0.790 - - 0.771 choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
26. PDCD2L 4843 1.56 - - - - - - 0.782 - - 0.778 programmed cell death 2-like
27. B4GAL-T7 B4GAL-T7 12356 1.559 - - - - - - 0.766 0.793 - -
28. ARFIP1 ENSGALG00000041361 7351 1.558 - - - - - - 0.775 0.783 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
29. AIFM1 ENSGALG00000004003 10451 1.55 - - - - - - - 0.755 - 0.795 apoptosis inducing factor mitochondria associated 1 [Source:NCBI gene;Acc:428688]
30. RFFL ENSGALG00000002225 928 1.549 - - - - - - 0.838 - - 0.711 ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
31. ADSS ENSGALG00000010702 7207 1.532 - - - - - - 0.735 0.797 - - adenylosuccinate synthase [Source:NCBI gene;Acc:428579]
32. TATDN1 ENSGALG00000041072 1585 1.525 - - - - - - - - 0.721 0.804 TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
33. gga-mir-6681 ENSGALG00000027840 546 1.508 - - - - - - - - 0.705 0.803 gga-mir-6681 [Source:miRBase;Acc:MI0022502]
34. TM2D2 ENSGALG00000003356 7088 1.494 - - - - - - 0.727 0.767 - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
35. STX6 3297 1.493 - - - - - - - 0.722 - 0.771 syntaxin 6
36. FAM96B 14435 1.48 - - - - - - - 0.722 - 0.758 family with sequence similarity 96 member B
37. NOTCH2 ENSGALG00000002922 3272 1.478 - - - - - - - 0.707 0.771 - notch 2 [Source:NCBI gene;Acc:374031]
38. EPHB3 ENSGALG00000008537 1843 1.458 - - - - - - - 0.755 0.703 - EPH receptor B3 [Source:HGNC Symbol;Acc:HGNC:3394]
39. TBC1D12 ENSGALG00000034044 5588 0.925 - - - - - - 0.925 - - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
40. DNAJB6 ENSGALG00000006477 3804 0.916 - - - - - - 0.916 - - - DnaJ heat shock protein family (Hsp40) member B6 [Source:NCBI gene;Acc:420448]
41. C5orf63 C5orf63 3718 0.913 - - - - - - 0.913 - - -
42. ENSGALG00000021024 ENSGALG00000021024 1339 0.912 - - - - - - - - 0.912 -
43. C7orf50 ENSGALG00000004055 5786 0.906 - - - - - - 0.906 - - - chromosome 7 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:22421]
44. REXO4 ENSGALG00000030609 2926 0.904 - - - - - - 0.904 - - - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
45. PLEKHA5 ENSGALG00000013134 3656 0.901 - - - - - - 0.901 - - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
46. RUFY1 ENSGALG00000029706 4473 0.897 - - - - - - 0.897 - - - RUN and FYVE domain containing 1 [Source:NCBI gene;Acc:426519]
47. LIG3 ENSGALG00000002288 7198 0.897 - - - - - - 0.897 - - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
48. ZBTB26 ENSGALG00000042762 1920 0.897 - - - - - - 0.897 - - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
49. KIF21A ENSGALG00000007098 5919 0.894 - - - - - - 0.894 - - - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
50. DDX42 ENSGALG00000000581 8780 0.894 - - - - - - 0.894 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
51. AP1S3 ENSGALG00000005171 2981 0.894 - - - - - - 0.894 - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
52. BEND5 ENSGALG00000010505 3298 0.891 - - - - - - 0.891 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
53. MTFR1L ENSGALG00000000998 3457 0.891 - - - - - - 0.891 - - - mitochondrial fission regulator 1 like [Source:HGNC Symbol;Acc:HGNC:28836]
54. FBXO25 ENSGALG00000016359 1547 0.89 - - - - - - - - 0.890 - F-box protein 25 [Source:HGNC Symbol;Acc:HGNC:13596]
55. PPIL2 ENSGALG00000042052 4349 0.89 - - - - - - 0.890 - - - peptidylprolyl isomerase like 2 [Source:NCBI gene;Acc:416775]
56. MRPL23 ENSGALG00000006561 13737 0.89 - - - - - - 0.890 - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
57. C1GALT1 ENSGALG00000009752 7148 0.889 - - - - - - 0.889 - - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
58. PYCR1 ENSGALG00000007300 7987 0.889 - - - - - - 0.889 - - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
59. FBXO28 ENSGALG00000009331 2871 0.889 - - - - - - 0.889 - - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
60. CCDC132 CCDC132 2632 0.889 - - - - - - 0.889 - - -
61. USP5 ENSGALG00000014525 21883 0.889 - - - - - - 0.889 - - - ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
62. COMMD5 ENSGALG00000008867 12173 0.887 - - - - - - 0.887 - - - COMM domain containing 5 [Source:NCBI gene;Acc:422376]
63. AP1AR ENSGALG00000028807 2398 0.886 - - - - - - 0.886 - - - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
64. MIA2 ENSGALG00000010189 1223 0.883 - - - - - - - - 0.883 - melanoma inhibitory activity 2, transcript variant X5
65. C11H19ORF12 C11H19ORF12 5149 0.882 - - - - - - 0.882 - - -
66. CASP6 ENSGALG00000012186 6639 0.882 - - - - - - 0.882 - - - caspase 6 [Source:NCBI gene;Acc:395477]
67. ACTR10 ENSGALG00000012041 2752 0.881 - - - - - - 0.881 - - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
68. C1H2ORF49 ENSGALG00000016796 2976 0.88 - - - - - - 0.880 - - - chromosome 1 open reading frame, human C2orf49 [Source:NCBI gene;Acc:418725]
69. PITPNB ENSGALG00000005654 21578 0.88 - - - - - - 0.880 - - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
70. RHOT2 ENSGALG00000002497 1744 0.879 - - - - - - 0.879 - - - ras homolog family member T2 [Source:NCBI gene;Acc:427651]
71. CINP ENSGALG00000011372 2366 0.879 - - - - - - 0.879 - - - cyclin dependent kinase 2 interacting protein [Source:NCBI gene;Acc:423467]
72. COX20 ENSGALG00000027440 5881 0.877 - - - - - - 0.877 - - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
73. ZNF830 ENSGALG00000013156 3896 0.876 - - - - - - 0.876 - - - zinc finger protein 830
74. GNE ENSGALG00000015331 1577 0.875 - - - - - - 0.875 - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
75. GNMT ENSGALG00000043290 3288 0.874 - - - - - - 0.874 - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
76. LMO4 ENSGALG00000006252 3686 0.873 - - - - - - 0.873 - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
77. ABHD13 ENSGALG00000016853 4975 0.873 - - - - - - 0.873 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
78. RNF144A ENSGALG00000028709 2855 0.872 - - - - - - 0.872 - - - ring finger protein 144A, transcript variant X1
79. IFT52 ENSGALG00000003523 1858 0.872 - - - - - - 0.872 - - - intraflagellar transport 52 [Source:NCBI gene;Acc:419165]
80. NARFL ENSGALG00000005365 2668 0.871 - - - - - - 0.871 - - - nuclear prelamin A recognition factor like [Source:NCBI gene;Acc:416535]
81. LYRM4 ENSGALG00000027339 2917 0.871 - - - - - - 0.871 - - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
82. SQSTM1 ENSGALG00000035804 2238 0.871 - - - - - - 0.871 - - - sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]
83. CLN6 ENSGALG00000007981 5656 0.871 - - - - - - 0.871 - - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
84. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.871 - - - - - - 0.871 - - -
85. GSKIP ENSGALG00000011088 3421 0.87 - - - - - - 0.870 - - - GSK3B interacting protein [Source:NCBI gene;Acc:423442]
86. WDR12 ENSGALG00000008470 7654 0.869 - - - - - - 0.869 - - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
87. CAPN1 ENSGALG00000041685 4011 0.869 - - - - - - 0.869 - - - calpain 1 [Source:NCBI gene;Acc:693249]
88. FAM53A ENSGALG00000015713 3795 0.869 - - - - - - 0.869 - - - family with sequence similarity 53 member A [Source:NCBI gene;Acc:378905]
89. ZCCHC8 ENSGALG00000004486 3201 0.869 - - - - - - 0.869 - - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
90. FBXW7 ENSGALG00000010103 5982 0.868 - - - - - - 0.868 - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
91. MRPS35 ENSGALG00000036730 6327 0.868 - - - - - - 0.868 - - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
92. COL17A1 ENSGALG00000029617 167 0.868 - - - - - - 0.868 - - - collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]
93. USP25 ENSGALG00000015693 2567 0.868 - - - - - - 0.868 - - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
94. ESCO1 ENSGALG00000014936 739 0.867 - - - - - - 0.867 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
95. DHX33 ENSGALG00000001630 7783 0.867 - - - - - - 0.867 - - - DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]
96. NUDCD1 ENSGALG00000040879 2965 0.867 - - - - - - 0.867 - - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
97. EML1 1941 0.867 - - - - - - 0.867 - - - echinoderm microtubule associated protein like 1, transcript variant X11
98. C12orf66 ENSGALG00000027682 2110 0.866 - - - - - - 0.866 - - - chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
99. TMEM14A ENSGALG00000019894 5279 0.866 - - - - - - 0.866 - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
100. TSPAN13 ENSGALG00000027240 8999 0.866 - - - - - - 0.866 - - - tetraspanin 13 [Source:NCBI gene;Acc:420595]

There are 676 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA