Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CACNA1B

Gene Name Gene ID Reads Annotation
CACNA1B ENSGALG00000008456 143 calcium voltage-gated channel subunit alpha1 B [Source:NCBI gene;Acc:374169]











Genes with expression patterns similar to CACNA1B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CACNA1B ENSGALG00000008456 143 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 calcium voltage-gated channel subunit alpha1 B [Source:NCBI gene;Acc:374169]
2. ENSGALG00000000407 ENSGALG00000000407 32 0.958 - - - - - - - 0.958 - -
3. BNIP2 ENSGALG00000003788 38 0.958 - - - - - - - 0.958 - - BCL2 interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:1083]
4. SNX18 ENSGALG00000014914 7 0.953 - - - - - - - 0.953 - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
5. PRLL ENSGALG00000009603 30 0.953 - - - - - - - 0.953 - - prolactin-like protein [Source:NCBI gene;Acc:417800]
6. ENSGALG00000007003 ENSGALG00000007003 2 0.953 - - - - - - - 0.953 - -
7. ENSGALG00000026668 ENSGALG00000026668 34 0.953 - - - - - - - 0.953 - -
8. ENSGALG00000001483 ENSGALG00000001483 215 0.953 - - - - - - - 0.953 - -
9. TNN ENSGALG00000004538 21 0.953 - - - - - - - 0.953 - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
10. FBXO43 ENSGALG00000038940 7 0.953 - - - - - - - 0.953 - - F-box protein 43 [Source:HGNC Symbol;Acc:HGNC:28521]
11. ENSGALG00000024306 ENSGALG00000024306 0 0.953 - - - - - - - 0.953 - -
12. gga-mir-1801 ENSGALG00000025241 13 0.953 - - - - - - - 0.953 - - gga-mir-1801 [Source:miRBase;Acc:MI0007545]
13. SESN3 ENSGALG00000017204 7 0.953 - - - - - - - 0.953 - - sestrin 3, transcript variant X2
14. SH3BP5 ENSGALG00000039337 17 0.953 - - - - - - - 0.953 - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
15. CIB3 ENSGALG00000003978 2 0.953 - - - - - - - 0.953 - - calcium and integrin binding family member 3 [Source:HGNC Symbol;Acc:HGNC:24580]
16. LNX1 ENSGALG00000013940 2 0.953 - - - - - - - 0.953 - - ligand of numb-protein X 1 [Source:HGNC Symbol;Acc:HGNC:6657]
17. TTC7B ENSGALG00000010680 4 0.953 - - - - - - - 0.953 - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
18. ZNF814 ZNF814 13 0.953 - - - - - - - 0.953 - -
19. ENSGALG00000023475 ENSGALG00000023475 19 0.953 - - - - - - - 0.953 - -
20. CMC4 ENSGALG00000023937 15 0.953 - - - - - - - 0.953 - - C-X9-C motif containing 4 [Source:HGNC Symbol;Acc:HGNC:35428]
21. STEAP4 ENSGALG00000008997 8 0.953 - - - - - - - 0.953 - - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
22. ATHL1 ATHL1 16 0.953 - - - - - - - 0.953 - -
23. ADSSL1 ENSGALG00000011618 85 0.953 - - - - - - - 0.953 - - adenylosuccinate synthase like 1 [Source:HGNC Symbol;Acc:HGNC:20093]
24. RGR ENSGALG00000002299 17 0.953 - - - - - - - 0.953 - - retinal G protein coupled receptor [Source:NCBI gene;Acc:423619]
25. LRRC34 ENSGALG00000009402 3 0.953 - - - - - - - 0.953 - - leucine rich repeat containing 34 [Source:HGNC Symbol;Acc:HGNC:28408]
26. ALPI ENSGALG00000023866 19 0.953 - - - - - - - 0.953 - - alkaline phosphatase, intestinal, transcript variant X2
27. ENSGALG00000005344 ENSGALG00000005344 6 0.953 - - - - - - - 0.953 - -
28. ENSGALG00000020616 ENSGALG00000020616 3 0.953 - - - - - - - 0.953 - -
29. TSC1 34 0.934 - - - - - - - 0.934 - - tuberous sclerosis 1, transcript variant X1
30. EIF2B5 ENSGALG00000008376 36 0.934 - - - - - - - 0.934 - - eukaryotic translation initiation factor 2B subunit epsilon [Source:HGNC Symbol;Acc:HGNC:3261]
31. POMGNT2 ENSGALG00000011518 36 0.926 - - - - - - - 0.926 - - protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
32. C10orf71 ENSGALG00000027353 19 0.922 - - - - - - 0.922 - - - chromosome 10 open reading frame 71 [Source:HGNC Symbol;Acc:HGNC:26973]
33. KCNJ5 ENSGALG00000001181 11 0.914 - - - - - - - 0.914 - - potassium voltage-gated channel subfamily J member 5 [Source:HGNC Symbol;Acc:HGNC:6266]
34. MEGF6L ENSGALG00000009458 14 0.908 - - - - - - - 0.908 - - multiple EGF-like-domains 6-like, transcript variant X21
35. ENSGALG00000020779 ENSGALG00000020779 19 0.906 - - - - - - - 0.906 - -
36. OTOL1 ENSGALG00000026305 14 0.902 - - - - - - - 0.902 - - otolin 1 [Source:HGNC Symbol;Acc:HGNC:34071]
37. ENSGALG00000005097 ENSGALG00000005097 85 0.897 - - - - - - - 0.897 - -
38. TNIP1 ENSGALG00000004496 355 0.894 - - - - - - - 0.894 - - TNFAIP3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16903]
39. SCUBE1 ENSGALG00000014178 91 0.893 - - - - - - - 0.893 - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
40. SPTSSB ENSGALG00000027494 82 0.854 - - - - - 0.854 - - - - serine palmitoyltransferase small subunit B [Source:NCBI gene;Acc:425008]
41. INTU ENSGALG00000010170 78 0.846 - - - - - - 0.846 - - - inturned planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:29239]
42. SLC35C2 ENSGALG00000020939 100 0.823 - - - - - - - 0.823 - - solute carrier family 35 member C2 [Source:NCBI gene;Acc:419306]
43. FOXP2 ENSGALG00000009424 101 0.821 - - - - - - 0.821 - - - forkhead box P2 [Source:HGNC Symbol;Acc:HGNC:13875]
44. DNAH12 ENSGALG00000005601 80 0.815 - - - - - - 0.815 - - - dynein, axonemal, heavy chain 12, transcript variant X6
45. FBXO39 ENSGALG00000029322 212 0.814 - - 0.814 - - - - - - - F-box protein 39 [Source:HGNC Symbol;Acc:HGNC:28565]
46. CRYGN ENSGALG00000006189 28 0.813 - - - - - - - 0.813 - - crystallin gamma N [Source:NCBI gene;Acc:428406]
47. SPATA5L1 ENSGALG00000005682 240 0.81 - - - - - - 0.810 - - - spermatogenesis associated 5 like 1 [Source:HGNC Symbol;Acc:HGNC:28762]
48. MIB2 ENSGALG00000001473 67 0.803 - - 0.803 - - - - - - - mindbomb E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:419408]
49. LHFPL5 ENSGALG00000039170 247 0.803 - - - - - - 0.803 - - - LHFPL tetraspan subfamily member 5 [Source:NCBI gene;Acc:378916]
50. SLCO4C1 ENSGALG00000026768 30 0.8 - - - - - - 0.800 - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
51. BRSK2 ENSGALG00000006681 158 0.795 - - - - - - 0.795 - - - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
52. HMGCLL1 ENSGALG00000016294 33 0.795 - - - - - - 0.795 - - - 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 [Source:HGNC Symbol;Acc:HGNC:21359]
53. GRIN1 ENSGALG00000008898 18 0.795 - - - - - - 0.795 - - - glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
54. ADRA1D ENSGALG00000038787 54 0.795 - - - - - - 0.795 - - - adrenoceptor alpha 1D
55. SYNM ENSGALG00000007048 705 0.792 - - - - - - 0.792 - - - synemin [Source:NCBI gene;Acc:395599]
56. MIP-3ALPHA MIP-3ALPHA 14 0.781 - - - - - - 0.781 - - -
57. ENSGALG00000005114 ENSGALG00000005114 79 0.78 - - - - - - - 0.780 - -
58. KIF27 ENSGALG00000012588 160 0.777 - - - - - - - 0.777 - - kinesin family member 27 [Source:HGNC Symbol;Acc:HGNC:18632]
59. PIP4K2B ENSGALG00000001610 49 0.776 - - - - - - 0.776 - - - phosphatidylinositol-5-phosphate 4-kinase type 2 beta [Source:HGNC Symbol;Acc:HGNC:8998]
60. DIS3L ENSGALG00000007643 69 0.771 - - - - - - - 0.771 - - DIS3 like exosome 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:28698]
61. HTR2C ENSGALG00000005853 90 0.768 - - - - - - - 0.768 - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
62. SI ENSGALG00000009511 5 0.767 - - - - - - 0.767 - - - sucrase-isomaltase
63. EFCAB2 ENSGALG00000028017 266 0.767 - - - - - - 0.767 - - - EF-hand calcium binding domain 2 [Source:HGNC Symbol;Acc:HGNC:28166]
64. NIM1 NIM1 18 0.767 - - - - - - 0.767 - - -
65. SLC6A11 ENSGALG00000004879 16 0.767 - - - - - - 0.767 - - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
66. LEKR1 50 0.767 - - - - - - 0.767 - - - leucine, glutamate and lysine rich 1, transcript variant X17
67. TEKT1 ENSGALG00000006064 18 0.767 - - - - - - 0.767 - - - tektin 1 [Source:HGNC Symbol;Acc:HGNC:15534]
68. BFSP1 ENSGALG00000008735 17 0.767 - - - - - - 0.767 - - - beaded filament structural protein 1 [Source:NCBI gene;Acc:396056]
69. ASB18 ENSGALG00000046564 7 0.767 - - - - - - 0.767 - - - ankyrin repeat and SOCS box containing 18 [Source:HGNC Symbol;Acc:HGNC:19770]
70. CA15L ENSGALG00000005896 4 0.767 - - - - - - 0.767 - - - carbonic anhydrase 15-like
71. ENSGALG00000028577 ENSGALG00000028577 4 0.767 - - - - - - 0.767 - - -
72. CRIM1 ENSGALG00000032640 506 0.765 - - - - - - 0.765 - - - cysteine rich transmembrane BMP regulator 1 [Source:NCBI gene;Acc:395067]
73. TCTEX1D1 54 0.758 - - - - - - - 0.758 - - Tctex1 domain containing 1, transcript variant X2
74. KSR1 ENSGALG00000005685 78 0.755 - - - - - - 0.755 - - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
75. DRD2 ENSGALG00000007794 399 0.755 - - - - - - - 0.755 - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
76. DGCR2 ENSGALG00000005891 8405 0.754 - - 0.754 - - - - - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
77. OSBPL9 ENSGALG00000010555 395 0.754 - - - - - - 0.754 - - - oxysterol binding protein like 9 [Source:HGNC Symbol;Acc:HGNC:16386]
78. SPNS3 ENSGALG00000001410 173 0.753 - - - - - - - 0.753 - - sphingolipid transporter 3 (putative) [Source:HGNC Symbol;Acc:HGNC:28433]
79. TAB3 ENSGALG00000016284 40 0.753 - - - - - - - 0.753 - - TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30681]
80. SP2 ENSGALG00000000233 43 0.753 - - - - - - - 0.753 - - Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
81. LRP3 ENSGALG00000004853 13 0.751 - - - - - - 0.751 - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
82. TRIM55 ENSGALG00000041327 1097 0.75 - - - - - - 0.750 - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
83. MGMT ENSGALG00000042949 53 0.75 - - - - - - 0.750 - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
84. ELF3 ENSGALG00000000616 217 0.747 - - - - - - 0.747 - - - E74 like ETS transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3318]
85. SAMSN1 ENSGALG00000040926 88 0.747 - - - - - - 0.747 - - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
86. ENSGALG00000023694 ENSGALG00000023694 45 0.747 - - - - - - 0.747 - - -
87. PIGG ENSGALG00000015349 314 0.744 - - - - - - 0.744 - - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
88. KITLG ENSGALG00000011206 71 0.744 - - - - - - 0.744 - - - KIT ligand [Source:NCBI gene;Acc:396028]
89. KIAA0825 ENSGALG00000014664 25 0.74 - - - - - - - 0.740 - - KIAA0825, transcript variant X7
90. SLC7A5 ENSGALG00000005845 261 0.74 - - - - - - 0.740 - - - solute carrier family 7 member 5 [Source:NCBI gene;Acc:415832]
91. BTBD2 ENSGALG00000001019 510 0.732 - - - - - - - 0.732 - - BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15504]
92. SPAG6 ENSGALG00000007892 80 0.729 - - - - - - 0.729 - - - sperm associated antigen 6 [Source:NCBI gene;Acc:420505]
93. SUFU ENSGALG00000008096 307 0.727 - - - - - - - 0.727 - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
94. ENSGALG00000017013 ENSGALG00000017013 286 0.726 - - - - - - 0.726 - - -
95. ENSGALG00000012518 ENSGALG00000012518 25 0.723 - - 0.723 - - - - - - -
96. SRD5A2 ENSGALG00000010625 23 0.722 - - - - - - - 0.722 - - steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
97. DGKH ENSGALG00000016959 75 0.721 - - - - - - - 0.721 - - diacylglycerol kinase eta [Source:HGNC Symbol;Acc:HGNC:2854]
98. NLGN4 NLGN4 283 0.719 - - - - - - 0.719 - - -
99. NPAS2 ENSGALG00000016774 48 0.718 - - - - - - - 0.718 - - neuronal PAS domain protein 2 [Source:NCBI gene;Acc:395433]
100. PAAF1 ENSGALG00000017318 605 0.718 - - - - - - 0.718 - - - proteasomal ATPase associated factor 1 [Source:NCBI gene;Acc:419061]

There are 18 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA