Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CA3

Gene Name Gene ID Reads Annotation
CA3 CA3 200











Genes with expression patterns similar to CA3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CA3 CA3 200 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. ENSGALG00000027412 ENSGALG00000027412 202 1.909 - - - 0.983 - 0.926 - - - -
3. KCNQ4 ENSGALG00000038708 1 1.52 - - 0.705 - - - - - - 0.815 potassium voltage-gated channel subfamily Q member 4 [Source:HGNC Symbol;Acc:HGNC:6298]
4. VWDE ENSGALG00000042443 160 0.988 - - - 0.988 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
5. KIF6 ENSGALG00000010057 84 0.987 - - - 0.987 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
6. MLH3 ENSGALG00000010304 231 0.987 - - - 0.987 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
7. ZBTB17 ENSGALG00000035352 280 0.986 - - - 0.986 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
8. DBN1 ENSGALG00000033405 216 0.984 - - - 0.984 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
9. TRIM62 ENSGALG00000028437 5124 0.983 - - - 0.983 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
10. GFPT2 ENSGALG00000039705 562 0.981 - - - 0.981 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
11. TBK1 ENSGALG00000009840 1650 0.978 - - - 0.978 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
12. KIAA1432 KIAA1432 1792 0.978 - - - 0.978 - - - - - -
13. SNORA31 SNORA31 183 0.977 - - - 0.977 - - - - - -
14. FRRS1 ENSGALG00000005418 332 0.977 - - - 0.977 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
15. GUF1 ENSGALG00000014217 211 0.977 - - - 0.977 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
16. ADCY9 ENSGALG00000007779 766 0.973 - - - 0.973 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
17. RNPC3 ENSGALG00000005162 269 0.972 - - - 0.972 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
18. WDR96 WDR96 255 0.969 - - - 0.969 - - - - - -
19. PRKD1 ENSGALG00000009900 2094 0.969 - - - 0.969 - - - - - - protein kinase D1 [Source:NCBI gene;Acc:423302]
20. PRDM4 ENSGALG00000012619 876 0.969 - - - 0.969 - - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
21. IFT43 ENSGALG00000020415 1218 0.964 - - - 0.964 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
22. TMOD1 ENSGALG00000002125 933 0.963 - - - 0.963 - - - - - - tropomodulin 1 [Source:NCBI gene;Acc:395883]
23. CYP20A1 ENSGALG00000008730 930 0.961 - - - 0.961 - - - - - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
24. COPA ENSGALG00000009153 11618 0.96 - - - 0.960 - - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
25. ASCC1 ENSGALG00000026019 3583 0.958 - - - 0.958 - - - - - - activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24268]
26. NCOA3 ENSGALG00000004570 243 0.957 - - - 0.957 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
27. PASK ENSGALG00000006016 3096 0.957 - - - 0.957 - - - - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
28. ASRGL1 ENSGALG00000015949 403 0.957 - - - 0.957 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
29. DEPDC5 ENSGALG00000006766 1592 0.957 - - - 0.957 - - - - - - DEP domain containing 5, transcript variant X6
30. ITGA9 ENSGALG00000029378 415 0.956 - - - 0.956 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
31. LRRCC1 ENSGALG00000039499 480 0.955 - - - 0.955 - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
32. RBFOX1 ENSGALG00000034325 2133 0.953 - - - 0.953 - - - - - - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
33. ITPKB ENSGALG00000009068 324 0.952 - - - 0.952 - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
34. TDRKH ENSGALG00000031812 1 0.951 - - - - - 0.951 - - - - tudor and KH domain containing [Source:HGNC Symbol;Acc:HGNC:11713]
35. ESRRB ENSGALG00000041775 43 0.951 - - - - - 0.951 - - - - estrogen related receptor beta [Source:HGNC Symbol;Acc:HGNC:3473]
36. ENSGALG00000027597 ENSGALG00000027597 13 0.951 - - - - - 0.951 - - - -
37. ENSGALG00000025801 ENSGALG00000025801 5 0.951 - - - - - 0.951 - - - -
38. SLC39A8 ENSGALG00000012298 9 0.951 - - - - - 0.951 - - - - solute carrier family 39 member 8 [Source:HGNC Symbol;Acc:HGNC:20862]
39. ENSGALG00000026109 ENSGALG00000026109 2 0.951 - - - - - 0.951 - - - -
40. SFMBT1 ENSGALG00000001753 10 0.951 - - - - - 0.951 - - - - Scm like with four mbt domains 1 [Source:HGNC Symbol;Acc:HGNC:20255]
41. MFSD8 ENSGALG00000010199 11 0.951 - - - - - 0.951 - - - - major facilitator superfamily domain containing 8 [Source:HGNC Symbol;Acc:HGNC:28486]
42. MAPKBP1 2 0.951 - - - - - 0.951 - - - - mitogen-activated protein kinase binding protein 1, transcript variant X3
43. BTBD3 ENSGALG00000009028 45 0.951 - - - - - 0.951 - - - - BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15854]
44. IFNAR1 ENSGALG00000030363 22 0.951 - - - - - 0.951 - - - - interferon alpha and beta receptor subunit 1 [Source:NCBI gene;Acc:395665]
45. VPS13B 2293 0.951 - - - 0.951 - - - - - - vacuolar protein sorting 13 homolog B
46. ISPD ENSGALG00000010795 7 0.951 - - - - - 0.951 - - - - isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
47. ADAMTSL3 ENSGALG00000006104 57 0.951 - - - - - 0.951 - - - - ADAMTS like 3 [Source:HGNC Symbol;Acc:HGNC:14633]
48. HPS5 ENSGALG00000027716 2466 0.951 - - - 0.951 - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
49. NOX5 ENSGALG00000008063 19 0.951 - - - - - 0.951 - - - - NADPH oxidase 5 [Source:NCBI gene;Acc:415565]
50. RNF6 ENSGALG00000017105 11 0.951 - - - - - 0.951 - - - - ring finger protein 6 [Source:HGNC Symbol;Acc:HGNC:10069]
51. MRPS30 ENSGALG00000014874 3416 0.951 - - - 0.951 - - - - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
52. SCTR ENSGALG00000012106 49 0.951 - - - - - 0.951 - - - - secretin receptor [Source:NCBI gene;Acc:770943]
53. CYP11A1 ENSGALG00000034982 1 0.951 - - - - - 0.951 - - - - cytochrome P450 family 11 subfamily A member 1 [Source:NCBI gene;Acc:414838]
54. SNORD65 SNORD65 3 0.951 - - - - - 0.951 - - - -
55. SLC2A1 ENSGALG00000004889 10 0.951 - - - - - 0.951 - - - - solute carrier family 2 member 1 [Source:NCBI gene;Acc:396130]
56. GPR22 ENSGALG00000008032 5 0.951 - - - - - 0.951 - - - - G protein-coupled receptor 22, transcript variant X1
57. DOLK ENSGALG00000026007 6 0.951 - - - - - 0.951 - - - - dolichol kinase [Source:NCBI gene;Acc:417199]
58. XG ENSGALG00000029002 17 0.951 - - - - - 0.951 - - - - Xg blood group
59. CYTH4 ENSGALG00000012454 12 0.951 - - - - - 0.951 - - - - cytohesin 4 [Source:NCBI gene;Acc:418043]
60. GALNT12 ENSGALG00000013197 1330 0.951 - - - 0.951 - - - - - - polypeptide N-acetylgalactosaminyltransferase 12 [Source:HGNC Symbol;Acc:HGNC:19877]
61. gga-mir-1647 ENSGALG00000025382 4 0.951 - - - - - 0.951 - - - - gga-mir-1647 [Source:miRBase;Acc:MI0007379]
62. CCSER1 ENSGALG00000039674 14 0.951 - - - - - 0.951 - - - - coiled-coil serine rich protein 1, transcript variant X3
63. GJA10 ENSGALG00000015606 1 0.951 - - - - - 0.951 - - - - gap junction protein, alpha 10, 62kDa
64. ENSGALG00000011658 ENSGALG00000011658 1 0.951 - - - - - 0.951 - - - -
65. MCCC2L ENSGALG00000011255 889 0.95 - - - 0.950 - - - - - - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
66. HINT3 ENSGALG00000044342 5674 0.95 - - - 0.950 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
67. BAG5 ENSGALG00000031062 4498 0.948 - - - 0.948 - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
68. ENPP3 ENSGALG00000037587 25 0.948 - - - - - 0.948 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
69. PANK1 ENSGALG00000006431 2910 0.946 - - - 0.946 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
70. PDE4B ENSGALG00000011094 1871 0.945 - - - 0.945 - - - - - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
71. CHCHD3 ENSGALG00000006489 18592 0.944 - - - 0.944 - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
72. TSPO ENSGALG00000014166 60 0.944 - - - - - 0.944 - - - - translocator protein [Source:NCBI gene;Acc:418226]
73. GTF3C4 ENSGALG00000031016 1221 0.943 - - - 0.943 - - - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
74. DPY30 ENSGALG00000010621 6818 0.943 - - - 0.943 - - - - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
75. ELMOD1 ENSGALG00000017169 2303 0.942 - - - 0.942 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
76. NME6 ENSGALG00000038044 1231 0.942 - - - 0.942 - - - - - - NME/NM23 nucleoside diphosphate kinase 6
77. TGS1 ENSGALG00000015340 5897 0.94 - - - 0.940 - - - - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
78. KIAA1462 1612 0.94 - - - 0.940 - - - - - - KIAA1462, transcript variant X4
79. HMHA1 HMHA1 929 0.938 - - - 0.938 - - - - - -
80. ASPH ENSGALG00000030112 1622 0.938 - - - 0.938 - - - - - - aspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]
81. FLNB ENSGALG00000005678 68 0.938 - - - - - 0.938 - - - - filamin B [Source:NCBI gene;Acc:378913]
82. PDE7A ENSGALG00000038395 3 0.937 - - - - - - - - - 0.937 phosphodiesterase 7A [Source:HGNC Symbol;Acc:HGNC:8791]
83. ENSGALG00000026461 ENSGALG00000026461 61 0.937 - - - - - - - - - 0.937
84. YTHDF3 ENSGALG00000039774 170 0.936 - - - - - 0.936 - - - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
85. BTG1L ENSGALG00000004676 2293 0.935 - - - 0.935 - - - - - - protein BTG1-like
86. CXorf23 1582 0.934 - - - 0.934 - - - - - - chromosome X open reading frame 23, transcript variant X3
87. C12orf45 C12orf45 2445 0.933 - - - 0.933 - - - - - -
88. AKT1 ENSGALG00000011620 4089 0.933 - - - 0.933 - - - - - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
89. MOSPD1 ENSGALG00000006132 8503 0.933 - - - 0.933 - - - - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
90. SUMO1 ENSGALG00000008435 19847 0.932 - - - 0.932 - - - - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
91. ENSGALG00000002020 ENSGALG00000002020 183 0.93 - - - - - 0.930 - - - -
92. IRF6 ENSGALG00000001405 3144 0.929 - - - 0.929 - - - - - - interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
93. C1orf21 ENSGALG00000020922 4035 0.929 - - - 0.929 - - - - - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
94. NPL ENSGALG00000004614 617 0.928 - - - 0.928 - - - - - - N-acetylneuraminate pyruvate lyase [Source:NCBI gene;Acc:429074]
95. KIN ENSGALG00000030702 1608 0.928 - - - 0.928 - - - - - - Kin17 DNA and RNA binding protein [Source:HGNC Symbol;Acc:HGNC:6327]
96. CBX3 ENSGALG00000011038 40977 0.925 - - - 0.925 - - - - - - chromobox 3 [Source:NCBI gene;Acc:395355]
97. RAB33B ENSGALG00000009790 2340 0.925 - - - 0.925 - - - - - - RAB33B, member RAS oncogene family [Source:NCBI gene;Acc:422441]
98. RSBN1 ENSGALG00000001860 761 0.925 - - - 0.925 - - - - - - round spermatid basic protein 1 [Source:HGNC Symbol;Acc:HGNC:25642]
99. MFSD2A ENSGALG00000003879 5455 0.925 - - - 0.925 - - - - - - major facilitator superfamily domain containing 2A [Source:HGNC Symbol;Acc:HGNC:25897]
100. UTP18 ENSGALG00000002985 7129 0.924 - - - 0.924 - - - - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]

There are 542 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA