Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for C9orf85

Gene Name Gene ID Reads Annotation
C9orf85 ENSGALG00000026001 4110 chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]











Genes with expression patterns similar to C9orf85

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. C9orf85 ENSGALG00000026001 4110 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
2. PSMG3 ENSGALG00000004203 11240 1.922 - - - - 0.982 - - 0.940 - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
3. ASAP2 ENSGALG00000016419 1393 1.916 - - - - 0.987 - 0.929 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
4. CCDC132 CCDC132 2632 1.858 - - - - 0.970 - 0.888 - - -
5. RHOT1 ENSGALG00000003397 5149 1.799 - - - - 0.970 - 0.829 - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
6. WDR92 ENSGALG00000008760 3934 1.794 - - 0.809 - 0.985 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
7. WHSC1 1712 1.784 - - 0.840 - - - 0.944 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
8. PTDSS2 ENSGALG00000004300 682 1.778 - - 0.825 - - - 0.953 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
9. SEPHS1 ENSGALG00000014575 10701 1.774 - - 0.833 - 0.941 - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
10. LGALS1 ENSGALG00000012420 13993 1.77 - - 0.806 - 0.964 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
11. STARD3NL ENSGALG00000033038 4851 1.769 - - 0.784 - 0.985 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
12. RALGDS ENSGALG00000003412 4478 1.768 - - 0.784 - 0.984 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
13. SNX14 ENSGALG00000015831 2554 1.763 - - 0.779 - 0.984 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
14. UTP6 ENSGALG00000003260 4909 1.761 - - 0.786 - 0.975 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
15. NDUFV1 ENSGALG00000042809 6222 1.749 - - 0.761 - 0.988 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
16. RPL22 ENSGALG00000000719 74238 1.749 - - - - 0.945 - 0.804 - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
17. MTX2 ENSGALG00000009264 17304 1.749 - - 0.834 - 0.915 - - - - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
18. TAF1B ENSGALG00000016437 2318 1.748 - - 0.823 - - - 0.925 - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
19. BEND5 ENSGALG00000010505 3298 1.74 - - 0.796 - - - 0.944 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
20. ABHD13 ENSGALG00000016853 4975 1.737 - - 0.789 - - - 0.948 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
21. DDX42 ENSGALG00000000581 8780 1.71 - - 0.746 - - - 0.964 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
22. SRP19 ENSGALG00000000218 14207 1.697 - - - - 0.954 - 0.743 - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
23. TIMMDC1 ENSGALG00000024480 9337 1.692 - - 0.708 - 0.984 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
24. CALSYNTENIN-1 CALSYNTENIN-1 11195 1.687 - - 0.764 - - - 0.923 - - -
25. HYAL1 ENSGALG00000000785 1778 1.676 - - 0.742 - - - 0.934 - - - hyaluronoglucosaminidase 1, transcript variant X3
26. COG7 ENSGALG00000006156 4072 1.676 - - 0.795 - - - 0.881 - - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
27. IFT81 ENSGALG00000003854 2534 1.652 - - 0.824 - - - 0.828 - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
28. ZCCHC8 ENSGALG00000004486 3201 1.64 - - 0.788 - - - 0.852 - - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
29. QSER1 ENSGALG00000012030 4490 1.63 - - 0.714 - - - 0.916 - - - glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
30. SMARCB1 ENSGALG00000005983 20548 1.612 - - - - 0.912 - - 0.700 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:NCBI gene;Acc:769489]
31. WDR12 ENSGALG00000008470 7654 1.575 - - 0.714 - - - 0.861 - - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
32. ELOVL5 ENSGALG00000016314 18163 1.566 - - 0.756 - 0.810 - - - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
33. LPCAT3 ENSGALG00000014570 7919 1.531 - - 0.819 - - - 0.712 - - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
34. CEPT1 ENSGALG00000000142 4219 1.47 - - 0.733 - - - 0.737 - - - choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
35. TAF5 ENSGALG00000008241 5227 1.458 - - 0.709 - - - 0.749 - - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
36. BAHD1 ENSGALG00000033675 1779 0.992 - - - - 0.992 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
37. MED8 ENSGALG00000009993 3095 0.992 - - - - 0.992 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
38. PTK2B ENSGALG00000016564 406 0.991 - - - - 0.991 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
39. PREP2 PREP2 238 0.991 - - - - 0.991 - - - - -
40. ANKRD9 ENSGALG00000011376 525 0.991 - - - - 0.991 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
41. SDCBP ENSGALG00000015436 1228 0.991 - - - - 0.991 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
42. RAMP3 ENSGALG00000037246 1187 0.991 - - - - 0.991 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
43. BRF1 ENSGALG00000011705 3406 0.991 - - - - 0.991 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
44. SMG7 ENSGALG00000004667 707 0.991 - - - - 0.991 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
45. PRDM4 ENSGALG00000012619 876 0.991 - - - - 0.991 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
46. PHTF1 ENSGALG00000001845 3276 0.99 - - - - 0.990 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
47. GTF2H1 ENSGALG00000042340 1553 0.989 - - - - 0.989 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
48. SYNE1 ENSGALG00000013505 2324 0.989 - - - - 0.989 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
49. RBM6 ENSGALG00000035578 1690 0.989 - - - - 0.989 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
50. LZIC ENSGALG00000002616 9052 0.989 - - - - 0.989 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
51. YARS ENSGALG00000003563 11093 0.989 - - - - 0.989 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
52. NF2 ENSGALG00000008073 4597 0.988 - - - - - - - 0.988 - - neurofibromin 2 [Source:NCBI gene;Acc:395158]
53. SAP30 ENSGALG00000036252 2032 0.988 - - - - 0.988 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
54. ENSGALG00000006569 ENSGALG00000006569 2169 0.987 - - - - 0.987 - - - - -
55. ETS1 ENSGALG00000001143 7284 0.987 - - - - 0.987 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
56. PITHD1 ENSGALG00000003986 11470 0.987 - - - - 0.987 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
57. TMF1 ENSGALG00000013408 3344 0.987 - - - - 0.987 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
58. KIF11 ENSGALG00000030597 5528 0.987 - - - - 0.987 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
59. DLL1 ENSGALG00000011182 1613 0.987 - - - - 0.987 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
60. CDKN1B ENSGALG00000022980 4606 0.986 - - - - 0.986 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
61. MRPL16 ENSGALG00000029419 8033 0.985 - - - - 0.985 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
62. MED21 ENSGALG00000027435 5766 0.985 - - - - 0.985 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
63. TRIAP1 ENSGALG00000007199 4921 0.984 - - - - - - - 0.984 - - TP53 regulated inhibitor of apoptosis 1 [Source:NCBI gene;Acc:416977]
64. FNDC5 ENSGALG00000003567 3328 0.984 - - - - 0.984 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
65. PCMT1 ENSGALG00000012388 7778 0.984 - - - - - - - 0.984 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:NCBI gene;Acc:428607]
66. RAD54B ENSGALG00000043597 1699 0.984 - - - - 0.984 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
67. LOC426385 ENSGALG00000026301 2703 0.984 - - - - 0.984 - - - - - serine/threonine kinase 35-like, transcript variant X2
68. RBM34 ENSGALG00000029915 5618 0.984 - - - - 0.984 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
69. COQ5 ENSGALG00000007185 5614 0.984 - - - - 0.984 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
70. IARS2 ENSGALG00000009566 4599 0.984 - - - - 0.984 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
71. HSF2 ENSGALG00000038420 5259 0.984 - - - - 0.984 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
72. DGKZ ENSGALG00000008380 5389 0.983 - - - - 0.983 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
73. FUNDC2 ENSGALG00000029585 9334 0.983 - - - - 0.983 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
74. EDNRA ENSGALG00000010013 2472 0.983 - - - - 0.983 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
75. ENSGALG00000027854 ENSGALG00000027854 5007 0.981 - - - - 0.981 - - - - -
76. LMAN2 ENSGALG00000033232 11740 0.981 - - - - 0.981 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
77. TSPO2 ENSGALG00000003212 5141 0.979 - - - - 0.979 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
78. SFXN5 ENSGALG00000016094 2678 0.978 - - - - 0.978 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
79. PBRM1 ENSGALG00000037455 6450 0.978 - - - - 0.978 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
80. MYBL2 ENSGALG00000003503 15875 0.978 - - - - 0.978 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
81. MEF2BNB MEF2BNB 5578 0.977 - - - - 0.977 - - - - -
82. MARC1 ENSGALG00000009453 5675 0.977 - - - - 0.977 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
83. UPF3B ENSGALG00000008618 12350 0.977 - - - - 0.977 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
84. HARS ENSGALG00000035080 11602 0.977 - - - - 0.977 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
85. TAF3 ENSGALG00000006731 15569 0.977 - - - - 0.977 - - - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
86. SH3BGR ENSGALG00000016127 2561 0.976 - - - - 0.976 - - - - - SH3 domain binding glutamate rich protein
87. DLD ENSGALG00000007931 11011 0.976 - - - - 0.976 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
88. LGMN ENSGALG00000010811 7401 0.974 - - - - 0.974 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
89. C11H19ORF12 C11H19ORF12 5149 0.974 - - - - - - 0.974 - - -
90. CDH3 5050 0.972 - - - - 0.972 - - - - - cadherin 3
91. PSMD3 ENSGALG00000033162 25615 0.972 - - - - 0.972 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
92. TUFT1 ENSGALG00000032955 1317 0.972 - - - - - - 0.972 - - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
93. TTI1 ENSGALG00000006791 1218 0.971 - - - - - - 0.971 - - - TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
94. SLMO2 SLMO2 9207 0.971 - - - - 0.971 - - - - -
95. SPRED1 ENSGALG00000028203 6520 0.97 - - - - 0.970 - - - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
96. ACAT2 ENSGALG00000011659 12825 0.97 - - - - 0.970 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
97. WNK2 ENSGALG00000038850 4712 0.97 - - - - 0.970 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
98. DENR ENSGALG00000003795 30805 0.969 - - - - 0.969 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
99. GATC ENSGALG00000007195 8610 0.968 - - - - 0.968 - - - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
100. SLC30A4 ENSGALG00000005703 5696 0.968 - - - - 0.968 - - - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]

There are 720 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA