Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for C9orf3

Gene Name Gene ID Reads Annotation
C9orf3 C9orf3 47











Genes with expression patterns similar to C9orf3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. C9orf3 C9orf3 47 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. GHSR ENSGALG00000027947 24 1.853 - - - - - 0.853 1.000 - - - growth hormone secretagogue receptor [Source:NCBI gene;Acc:378911]
3. SIX4 ENSGALG00000017389 10 1.744 - - - - 0.744 - 1.000 - - - SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]
4. RASAL2 ENSGALG00000004323 55 1.711 - - - - - - 1.000 - - 0.711 RAS protein activator like 2 [Source:HGNC Symbol;Acc:HGNC:9874]
5. BRD8 ENSGALG00000037646 100 1.703 - - - - - 0.713 - 0.990 - - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
6. SHCBP1 ENSGALG00000004444 59 1.575 - - - - - 0.796 - - - 0.779 SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]
7. RC3H2 ENSGALG00000001253 18 1.506 - - - - 0.744 0.762 - - - - ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
8. SHROOM3 35 1 - - - - - - 1.000 - - - shroom family member 3, transcript variant X1
9. SCN1A ENSGALG00000010943 6 1 - - - - - - 1.000 - - - sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]
10. EPB42 ENSGALG00000021230 20 1 - - - - - - 1.000 - - - Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA. [Source:RefSeq mRNA;Acc:NM_001321559]
11. CFAP99 ENSGALG00000015685 32 1 - - - - - - 1.000 - - - cilia and flagella associated protein 99 [Source:HGNC Symbol;Acc:HGNC:51180]
12. CARF ENSGALG00000008474 6 1 - - - - - - 1.000 - - - calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
13. SLC26A4 ENSGALG00000007998 2 1 - - - - - - 1.000 - - - solute carrier family 26 member 4 [Source:HGNC Symbol;Acc:HGNC:8818]
14. SLC5A7 ENSGALG00000016804 93 1 - - - - - - 1.000 - - - solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
15. PAX5 ENSGALG00000016431 1 1 - - - - - - 1.000 - - - paired box 5 [Source:NCBI gene;Acc:387330]
16. WNK1 ENSGALG00000012992 67 1 - - - - - - 1.000 - - - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]
17. SCN3B ENSGALG00000006490 48 1 - - - - - - 1.000 - - - sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]
18. SEMA4G ENSGALG00000026957 11 1 - - - - - - 1.000 - - - semaphorin 4G [Source:HGNC Symbol;Acc:HGNC:10735]
19. ARSA ENSGALG00000035824 299 1 - - - - - - 1.000 - - - arylsulfatase A [Source:HGNC Symbol;Acc:HGNC:713]
20. GTF3C6 ENSGALG00000015044 112 1 - - - - - - 1.000 - - - general transcription factor IIIC subunit 6 [Source:NCBI gene;Acc:421754]
21. HECA ENSGALG00000013824 14 1 - - - - - - 1.000 - - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
22. RASA4 ENSGALG00000001876 178 1 - - - - - - 1.000 - - - RAS p21 protein activator 4 [Source:NCBI gene;Acc:417513]
23. DNAJC28 ENSGALG00000037414 6 1 - - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C28 [Source:HGNC Symbol;Acc:HGNC:1297]
24. ENSGALG00000027164 ENSGALG00000027164 8 1 - - - - - - 1.000 - - -
25. SEPT12 ENSGALG00000029027 611 1 - - - - - - 1.000 - - - septin 12 [Source:HGNC Symbol;Acc:HGNC:26348]
26. ZNF143 ENSGALG00000005787 345 1 - - - - - - 1.000 - - - zinc finger protein 143 [Source:HGNC Symbol;Acc:HGNC:12928]
27. ASMT ENSGALG00000016685 3 1 - - - - - - 1.000 - - - acetylserotonin O-methyltransferase [Source:NCBI gene;Acc:396286]
28. LMLN ENSGALG00000012067 15 1 - - - - - - 1.000 - - - leishmanolysin like peptidase [Source:HGNC Symbol;Acc:HGNC:15991]
29. ENSGALG00000028222 ENSGALG00000028222 44 1 - - - - - - 1.000 - - -
30. WWTR1 ENSGALG00000010412 5 1 - - - - - - 1.000 - - - WW domain containing transcription regulator 1 [Source:HGNC Symbol;Acc:HGNC:24042]
31. TYRP1 ENSGALG00000015205 4 1 - - - - - - 1.000 - - - tyrosinase related protein 1 [Source:NCBI gene;Acc:395913]
32. VENTX VENTX 50 1 - - - - - - 1.000 - - -
33. OLAH ENSGALG00000043833 3 1 - - - - - - 1.000 - - - oleoyl-ACP hydrolase [Source:HGNC Symbol;Acc:HGNC:25625]
34. UBXN6 ENSGALG00000001146 122 1 - - - - - - 1.000 - - - UBX domain protein 6 [Source:HGNC Symbol;Acc:HGNC:14928]
35. CNP1 ENSGALG00000028638 56 1 - - - - - - 1.000 - - - C-type natriuretic peptide 1 [Source:NCBI gene;Acc:100499455]
36. CHST9 ENSGALG00000019489 21 0.99 - - - - - - - 0.990 - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
37. FAM160A2 ENSGALG00000003416 23 0.99 - - - - - - - 0.990 - - family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
38. PROSER1 ENSGALG00000017038 8 0.99 - - - - - - - 0.990 - - proline and serine rich 1 [Source:HGNC Symbol;Acc:HGNC:20291]
39. ANKRD27 ENSGALG00000004671 26 0.99 - - - - - - - 0.990 - - ankyrin repeat domain 27 [Source:NCBI gene;Acc:415766]
40. TMC3 ENSGALG00000006376 12 0.99 - - - - - - - 0.990 - - transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
41. ABCB1LB ABCB1LB 4 0.99 - - - - - - - 0.990 - -
42. ST8SIA5 ENSGALG00000035927 4 0.99 - - - - - - - 0.990 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:NCBI gene;Acc:414797]
43. TMX1 ENSGALG00000020340 6 0.99 - - - - - - - 0.990 - - thioredoxin related transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:15487]
44. HCRT ENSGALG00000011485 62 0.99 - - - - - - - 0.990 - - hypocretin neuropeptide precursor [Source:NCBI gene;Acc:374005]
45. ATF6 ENSGALG00000032278 71 0.99 - - - - - - - 0.990 - - activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]
46. FBXL4 ENSGALG00000015490 12 0.945 - - - - - - - 0.945 - - F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
47. TRMT13 ENSGALG00000005290 95 0.94 - - - - - - - 0.940 - - tRNA methyltransferase 13 homolog [Source:HGNC Symbol;Acc:HGNC:25502]
48. RNF151 ENSGALG00000034803 16 0.94 - - - - - - - 0.940 - - ring finger protein 151, transcript variant X2
49. MSGN1 ENSGALG00000016469 17 0.938 - - - - - - - 0.938 - - mesogenin 1 [Source:NCBI gene;Acc:395419]
50. NKX2-8 ENSGALG00000028483 174 0.934 - - - - - - - 0.934 - - NK2 homeobox 8 [Source:HGNC Symbol;Acc:HGNC:16364]
51. CLDN12 ENSGALG00000009038 16 0.933 - - - - - - - 0.933 - - claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
52. C1orf170 C1orf170 7 0.929 - - - - - - 0.929 - - -
53. MMR1L3 ENSGALG00000008638 26 0.928 - - - - - - - 0.928 - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
54. ALOX5AP ENSGALG00000026781 28 0.92 - - - - - - - 0.920 - - arachidonate 5-lipoxygenase activating protein [Source:NCBI gene;Acc:770904]
55. FAM73A FAM73A 7 0.919 - - - 0.919 - - - - - -
56. EFCC1 ENSGALG00000005024 51 0.918 - - - - - - - 0.918 - - EF-hand and coiled-coil domain containing 1, transcript variant X6
57. GMPR ENSGALG00000012705 30 0.911 - - - - - - - 0.911 - - guanosine monophosphate reductase [Source:NCBI gene;Acc:420842]
58. ENSGALG00000016214 ENSGALG00000016214 26 0.901 - - - - - - - 0.901 - -
59. gga-mir-6585 ENSGALG00000027202 102 0.9 - - - - - - - 0.900 - - gga-mir-6585 [Source:miRBase;Acc:MI0022405]
60. SLC35F5 ENSGALG00000012166 25 0.9 - - - - - - - 0.900 - - solute carrier family 35 member F5 [Source:HGNC Symbol;Acc:HGNC:23617]
61. LAMB4 ENSGALG00000007917 54 0.895 - - - - - - - 0.895 - - laminin subunit beta 4 [Source:NCBI gene;Acc:396076]
62. C8H1ORF52 C8H1ORF52 118 0.893 - - - - - - - 0.893 - -
63. PYROXD1 ENSGALG00000013173 89 0.876 - - - - - - - - - 0.876 pyridine nucleotide-disulphide oxidoreductase domain 1 [Source:NCBI gene;Acc:418191]
64. SAMD10 ENSGALG00000006007 15 0.874 - - - 0.874 - - - - - - sterile alpha motif domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16129]
65. RHOJ ENSGALG00000011855 17 0.872 - - - - 0.872 - - - - - ras homolog family member J [Source:NCBI gene;Acc:423513]
66. C9orf171 C9orf171 35 0.865 - - - 0.865 - - - - - -
67. FRK ENSGALG00000014979 65 0.86 - - - - - - - 0.860 - - fyn related Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3955]
68. HECW1 ENSGALG00000037193 24 0.859 - - - - 0.859 - - - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:22195]
69. OR14I1 OR14I1 14 0.858 - - - - - 0.858 - - - -
70. ATP12A ENSGALG00000006469 7 0.853 - - - - - 0.853 - - - - ATPase H+/K+ transporting non-gastric alpha2 subunit [Source:NCBI gene;Acc:419743]
71. U4atac U4atac 23 0.853 - - - - - 0.853 - - - -
72. ENSGALG00000016257 ENSGALG00000016257 4 0.853 - - - - - 0.853 - - - -
73. SLC24A1 ENSGALG00000007495 3 0.853 - - - - - 0.853 - - - - solute carrier family 24 member 1 [Source:NCBI gene;Acc:414892]
74. ENSGALG00000020459 ENSGALG00000020459 3 0.853 - - - - - 0.853 - - - -
75. NLGN3 ENSGALG00000005553 4 0.853 - - - - - 0.853 - - - - neuroligin 3 [Source:NCBI gene;Acc:770104]
76. GPR6 ENSGALG00000015068 2 0.853 - - - - - 0.853 - - - - G protein-coupled receptor 6 [Source:HGNC Symbol;Acc:HGNC:4515]
77. POMT1 ENSGALG00000003757 38 0.853 - - - - - 0.853 - - - - protein O-mannosyltransferase 1 [Source:NCBI gene;Acc:417175]
78. OCM ENSGALG00000003462 6 0.853 - - - - - 0.853 - - - - oncomodulin [Source:NCBI gene;Acc:386586]
79. ENSGALG00000017269 ENSGALG00000017269 13 0.853 - - - - - 0.853 - - - -
80. C16orf11 C16orf11 2 0.853 - - - - - 0.853 - - - -
81. OVCH2 ENSGALG00000005318 8 0.853 - - - - - 0.853 - - - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
82. ENSGALG00000025883 ENSGALG00000025883 6 0.853 - - - - - 0.853 - - - -
83. BEGAIN ENSGALG00000011236 35 0.853 - - - - - 0.853 - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
84. ENSGALG00000009227 ENSGALG00000009227 2 0.853 - - - - - 0.853 - - - -
85. LRRC47 7 0.853 - - - - - 0.853 - - - - leucine rich repeat containing 47
86. MDM4 ENSGALG00000000636 91 0.853 - - - - - 0.853 - - - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
87. SUSD4 ENSGALG00000009388 48 0.853 - - - - - 0.853 - - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
88. ERG ENSGALG00000016058 53 0.851 - - - - - - - - - 0.851 ERG, ETS transcription factor [Source:NCBI gene;Acc:374146]
89. NIPA1 ENSGALG00000039811 20 0.85 - - - - - 0.850 - - - - NIPA magnesium transporter 1 [Source:HGNC Symbol;Acc:HGNC:17043]
90. RFX7 ENSGALG00000041896 69 0.849 - - - - - 0.849 - - - - regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
91. CAPN6 ENSGALG00000008006 16 0.849 - - - - - 0.849 - - - - calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
92. SLC6A18 ENSGALG00000013180 6 0.847 - - - 0.847 - - - - - - solute carrier family 6 member 18 [Source:HGNC Symbol;Acc:HGNC:26441]
93. CCDC64 CCDC64 2 0.847 - - - 0.847 - - - - - -
94. RECQL5 ENSGALG00000002424 16 0.847 - - - 0.847 - - - - - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
95. CHRNG ENSGALG00000007906 19 0.847 - - - 0.847 - - - - - - cholinergic receptor nicotinic gamma subunit [Source:NCBI gene;Acc:429151]
96. C11orf89 C11orf89 1 0.847 - - - 0.847 - - - - - -
97. OLFML2B ENSGALG00000002667 8 0.847 - - - 0.847 - - - - - - olfactomedin like 2B [Source:HGNC Symbol;Acc:HGNC:24558]
98. NANOG ENSGALG00000027772 89 0.847 - - - 0.847 - - - - - - Nanog homeobox [Source:NCBI gene;Acc:100272166]
99. CORO6 ENSGALG00000028949 21 0.847 - - - 0.847 - - - - - - coronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]
100. BACE1 ENSGALG00000007298 3 0.847 - - - 0.847 - - - - - - beta-secretase 1 [Source:HGNC Symbol;Acc:HGNC:933]

There are 189 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA