Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Bre

Gene Name Gene ID Reads Annotation
Bre 3054 brain and reproductive organ-expressed protein, transcript variant X1







Genes with expression patterns similar to Bre

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Bre 3054 6 1.000 1.000 1.000 1.000 1.000 1.000 brain and reproductive organ-expressed protein, transcript variant X1
2. Metap1 ENSMUSG00000005813 5209 0.997 - 0.997 - - - - methionyl aminopeptidase 1 [Source:MGI Symbol;Acc:MGI:1922874]
3. Rfc4 ENSMUSG00000022881 1797 0.997 - 0.997 - - - - replication factor C (activator 1) 4 [Source:MGI Symbol;Acc:MGI:2146571]
4. Jpx ENSMUSG00000097571 1606 0.997 - 0.997 - - - - Jpx transcript, Xist activator (non-protein coding) [Source:MGI Symbol;Acc:MGI:2180008]
5. Ssbp2 ENSMUSG00000003992 5516 0.997 - 0.997 - - - - single-stranded DNA binding protein 2 [Source:MGI Symbol;Acc:MGI:1914220]
6. Oxsr1 ENSMUSG00000036737 2902 0.997 - 0.997 - - - - oxidative-stress responsive 1 [Source:MGI Symbol;Acc:MGI:1917378]
7. Fhl2 ENSMUSG00000008136 2073 0.997 - 0.997 - - - - four and a half LIM domains 2 [Source:MGI Symbol;Acc:MGI:1338762]
8. B9d2 ENSMUSG00000063439 1774 0.997 - 0.997 - - - - B9 protein domain 2 [Source:MGI Symbol;Acc:MGI:2387643]
9. Mbd4 ENSMUSG00000030322 3686 0.997 - 0.997 - - - - methyl-CpG binding domain protein 4 [Source:MGI Symbol;Acc:MGI:1333850]
10. Nus1 ENSMUSG00000023068 4291 0.997 - 0.997 - - - - NUS1 dehydrodolichyl diphosphate synthase subunit [Source:MGI Symbol;Acc:MGI:1196365]
11. RP24-570C10.6 RP24-570C10.6 1922 0.997 - 0.997 - - - -
12. Pax6 ENSMUSG00000027168 2751 0.996 - 0.996 - - - - paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
13. Nufip2 ENSMUSG00000037857 4757 0.996 - 0.996 - - - - nuclear fragile X mental retardation protein interacting protein 2 [Source:MGI Symbol;Acc:MGI:1915814]
14. Ddx54 ENSMUSG00000029599 3371 0.996 - 0.996 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:MGI Symbol;Acc:MGI:1919240]
15. Hax1 ENSMUSG00000027944 7599 0.996 - 0.996 - - - - HCLS1 associated X-1 [Source:MGI Symbol;Acc:MGI:1346319]
16. Poc1b ENSMUSG00000019952 3527 0.996 - 0.996 - - - - POC1 centriolar protein B [Source:MGI Symbol;Acc:MGI:1918511]
17. Mtfr1l ENSMUSG00000046671 3218 0.996 - 0.996 - - - - mitochondrial fission regulator 1-like [Source:MGI Symbol;Acc:MGI:1924074]
18. Zyg11b ENSMUSG00000034636 4618 0.996 - 0.996 - - - - zyg-ll family member B, cell cycle regulator [Source:MGI Symbol;Acc:MGI:2685277]
19. Kif22 ENSMUSG00000030677 4914 0.995 - 0.995 - - - - kinesin family member 22 [Source:MGI Symbol;Acc:MGI:109233]
20. Sf3b2 ENSMUSG00000024853 10455 0.995 - 0.995 - - - - splicing factor 3b, subunit 2 [Source:MGI Symbol;Acc:MGI:2441856]
21. Qk ENSMUSG00000062078 10985 0.995 - 0.995 - - - - quaking [Source:MGI Symbol;Acc:MGI:97837]
22. Ptdss1 ENSMUSG00000021518 4429 0.995 - 0.995 - - - - phosphatidylserine synthase 1 [Source:MGI Symbol;Acc:MGI:1276575]
23. Klhdc10 ENSMUSG00000029775 6240 0.995 - 0.995 - - - - kelch domain containing 10 [Source:MGI Symbol;Acc:MGI:1924038]
24. Meis2 ENSMUSG00000027210 12084 0.993 - 0.993 - - - - Meis homeobox 2 [Source:MGI Symbol;Acc:MGI:108564]
25. Smarcc2 ENSMUSG00000025369 11776 0.992 - 0.992 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:MGI Symbol;Acc:MGI:1915344]
26. Psma2 ENSMUSG00000015671 11365 0.992 - 0.992 - - - - proteasome (prosome, macropain) subunit, alpha type 2 [Source:MGI Symbol;Acc:MGI:104885]
27. Igf2r ENSMUSG00000023830 12577 0.991 - 0.991 - - - - insulin-like growth factor 2 receptor [Source:MGI Symbol;Acc:MGI:96435]
28. Tnpo1 ENSMUSG00000009470 10504 0.99 - 0.990 - - - - transportin 1 [Source:MGI Symbol;Acc:MGI:2681523]
29. Kif5b ENSMUSG00000006740 15165 0.99 - 0.990 - - - - kinesin family member 5B [Source:MGI Symbol;Acc:MGI:1098268]
30. Sec31a ENSMUSG00000035325 20178 0.987 - 0.987 - - - - Sec31 homolog A (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1916412]
31. Gm8738 ENSMUSG00000092540 9001 0.983 - 0.983 - - - - predicted gene 8738 [Source:MGI Symbol;Acc:MGI:3644778]
32. Snap47 ENSMUSG00000009894 8699 0.98 - 0.980 - - - - synaptosomal-associated protein, 47 [Source:MGI Symbol;Acc:MGI:1915076]
33. Lman1 ENSMUSG00000041891 6635 0.971 - 0.971 - - - - lectin, mannose-binding, 1 [Source:MGI Symbol;Acc:MGI:1917611]
34. Hmgn1 ENSMUSG00000040681 55060 0.97 - 0.970 - - - - high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
35. Map1b ENSMUSG00000052727 28977 0.962 - 0.962 - - - - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
36. Rps5 ENSMUSG00000012848 49542 0.95 - 0.950 - - - - ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
37. Rps4x ENSMUSG00000031320 60937 0.932 - 0.932 - - - - ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
38. Hba-x ENSMUSG00000055609 87325 0.925 - 0.925 - - - - hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
39. Tecr ENSMUSG00000031708 37176 0.923 - 0.923 - - - - trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
40. Rpl23 ENSMUSG00000071415 83209 0.898 - 0.898 - - - - ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
41. Trim28 ENSMUSG00000005566 48788 0.887 - 0.887 - - - - tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
42. Ccdc15 ENSMUSG00000034303 132 0.862 - - 0.862 - - - coiled-coil domain containing 15 [Source:MGI Symbol;Acc:MGI:2444488]
43. Wfdc3 ENSMUSG00000076434 12 0.856 - - 0.856 - - - WAP four-disulfide core domain 3 [Source:MGI Symbol;Acc:MGI:1923897]
44. Gm7206 ENSMUSG00000082475 7 0.855 - - 0.855 - - - predicted pseudogene 7206 [Source:MGI Symbol;Acc:MGI:3646634]
45. Gm20382 ENSMUSG00000111851 9 0.855 - - 0.855 - - -
46. Dnaaf3 ENSMUSG00000055809 39 0.855 - - 0.855 - - - dynein, axonemal assembly factor 3 [Source:MGI Symbol;Acc:MGI:3588207]
47. G630016G05Rik ENSMUSG00000086308 120 0.855 - - 0.855 - - - RIKEN cDNA G630016G05 gene [Source:MGI Symbol;Acc:MGI:3603178]
48. Gm15852 ENSMUSG00000089990 9 0.855 - - 0.855 - - - predicted gene 15852 [Source:MGI Symbol;Acc:MGI:3801733]
49. Ccdc64 160 0.854 - - 0.854 - - - coiled-coil domain containing 64, transcript variant X3
50. Gm15541 ENSMUSG00000087371 31 0.854 - - 0.854 - - - predicted gene 15541 [Source:MGI Symbol;Acc:MGI:3782989]
51. 5031434C07Rik ENSMUSG00000044574 16 0.854 - - 0.854 - - - RIKEN cDNA 5031434C07 gene [Source:MGI Symbol;Acc:MGI:2442810]
52. Cd79a ENSMUSG00000003379 33 0.853 - - 0.853 - - - CD79A antigen (immunoglobulin-associated alpha) [Source:MGI Symbol;Acc:MGI:101774]
53. Apoh ENSMUSG00000000049 32 0.852 - - 0.852 - - - apolipoprotein H [Source:MGI Symbol;Acc:MGI:88058]
54. Gm13383 ENSMUSG00000087485 8 0.852 - - 0.852 - - - predicted gene 13383 [Source:MGI Symbol;Acc:MGI:3650825]
55. Gm16596 ENSMUSG00000097788 14 0.851 - - 0.851 - - - predicted gene, 16596 [Source:MGI Symbol;Acc:MGI:4439520]
56. Gm13712 ENSMUSG00000082534 14 0.85 - - 0.850 - - - predicted gene 13712 [Source:MGI Symbol;Acc:MGI:3650489]
57. Lgi3 ENSMUSG00000033595 15 0.849 - - 0.849 - - - leucine-rich repeat LGI family, member 3 [Source:MGI Symbol;Acc:MGI:2182619]
58. Gm22661 ENSMUSG00000077380 11 0.849 - - 0.849 - - - predicted gene, 22661 [Source:MGI Symbol;Acc:MGI:5452438]
59. Tecpr2 ENSMUSG00000021275 325 0.849 - - 0.849 - - - tectonin beta-propeller repeat containing 2 [Source:MGI Symbol;Acc:MGI:2144865]
60. E030010N08Rik E030010N08Rik 22 0.847 - - 0.847 - - -
61. Olfr613 ENSMUSG00000078624 56 0.847 - - 0.847 - - - olfactory receptor 613 [Source:MGI Symbol;Acc:MGI:3030447]
62. 1110046J04Rik ENSMUSG00000085457 36 0.847 - - 0.847 - - - RIKEN cDNA 1110046J04 gene [Source:MGI Symbol;Acc:MGI:1916058]
63. Tnk1 ENSMUSG00000001583 49 0.847 - - 0.847 - - - tyrosine kinase, non-receptor, 1 [Source:MGI Symbol;Acc:MGI:1930958]
64. Lefty1 ENSMUSG00000038793 35 0.846 - - 0.846 - - - left right determination factor 1 [Source:MGI Symbol;Acc:MGI:107405]
65. Gm4604 70 0.844 - - 0.844 - - - predicted gene 4604
66. Gm20748 Gm20748 70 0.844 - - 0.844 - - -
67. Cd180 ENSMUSG00000021624 43 0.843 - - 0.843 - - - CD180 antigen [Source:MGI Symbol;Acc:MGI:1194924]
68. Gm21887 ENSMUSG00000095562 34 0.842 - - 0.842 - - - predicted gene, 21887 [Source:MGI Symbol;Acc:MGI:5434051]
69. Gm16741 ENSMUSG00000084775 11 0.841 - - 0.841 - - - predicted gene, 16741 [Source:MGI Symbol;Acc:MGI:4439665]
70. Gm13977 ENSMUSG00000086735 23 0.84 - - 0.840 - - - predicted gene 13977 [Source:MGI Symbol;Acc:MGI:3652169]
71. Tceal6 ENSMUSG00000031409 119 0.839 - - 0.839 - - - transcription elongation factor A (SII)-like 6 [Source:MGI Symbol;Acc:MGI:1923939]
72. Pqlc3 ENSMUSG00000045679 61 0.839 - - 0.839 - - - PQ loop repeat containing [Source:MGI Symbol;Acc:MGI:2444067]
73. Dppa4 ENSMUSG00000058550 49 0.835 - - 0.835 - - - developmental pluripotency associated 4 [Source:MGI Symbol;Acc:MGI:2157525]
74. C130026L21Rik ENSMUSG00000052848 32 0.833 - - 0.833 - - - RIKEN cDNA C130026L21 gene [Source:MGI Symbol;Acc:MGI:3041189]
75. Dcaf12l2 ENSMUSG00000050926 30 0.833 - - 0.833 - - - DDB1 and CUL4 associated factor 12-like 2 [Source:MGI Symbol;Acc:MGI:2445178]
76. Slc6a7 ENSMUSG00000052026 10 0.832 - - 0.832 - - - solute carrier family 6 (neurotransmitter transporter, L-proline), member 7 [Source:MGI Symbol;Acc:MGI:2147363]
77. Dennd2c ENSMUSG00000007379 175 0.831 - - 0.831 - - - DENN/MADD domain containing 2C [Source:MGI Symbol;Acc:MGI:3036254]
78. Gm15663 ENSMUSG00000085282 44 0.83 - - 0.830 - - - predicted gene 15663 [Source:MGI Symbol;Acc:MGI:3783105]
79. Krt15 ENSMUSG00000054146 57 0.83 - - 0.830 - - - keratin 15 [Source:MGI Symbol;Acc:MGI:96689]
80. Gm26901 ENSMUSG00000097797 31 0.83 - - 0.830 - - - predicted gene, 26901 [Source:MGI Symbol;Acc:MGI:5477395]
81. Recql4 ENSMUSG00000033762 18 0.83 - - 0.830 - - - RecQ protein-like 4 [Source:MGI Symbol;Acc:MGI:1931028]
82. Prss53 ENSMUSG00000044139 49 0.829 - - 0.829 - - - protease, serine 53 [Source:MGI Symbol;Acc:MGI:2652890]
83. Mir1946b ENSMUSG00000088478 103 0.828 - - 0.828 - - - microRNA 1946b [Source:MGI Symbol;Acc:MGI:3837217]
84. Slc24a1 ENSMUSG00000034452 11 0.827 - - 0.827 - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:MGI Symbol;Acc:MGI:2384871]
85. Akna ENSMUSG00000039158 583 0.827 - - 0.827 - - - AT-hook transcription factor [Source:MGI Symbol;Acc:MGI:2140340]
86. Pisd-ps1 ENSMUSG00000082286 31 0.827 - - 0.827 - - - phosphatidylserine decarboxylase, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3842428]
87. Irgm1 ENSMUSG00000046879, ENSMUSG00000116444 77 0.826 - - 0.826 - - - immunity-related GTPase family M member 1 [Source:NCBI gene;Acc:15944]
88. 2310030G06Rik ENSMUSG00000032062 62 0.824 - - 0.824 - - - RIKEN cDNA 2310030G06 gene [Source:MGI Symbol;Acc:MGI:1914202]
89. Gyltl1b 89 0.824 - - 0.824 - - - glycosyltransferase-like 1B, transcript variant X7
90. Espl1 ENSMUSG00000058290 1337 0.821 - - 0.821 - - - extra spindle pole bodies 1, separase [Source:MGI Symbol;Acc:MGI:2146156]
91. Gm8619 Gm8619 20 0.821 - - 0.821 - - -
92. Gng4 ENSMUSG00000021303 43 0.82 - - 0.820 - - - guanine nucleotide binding protein (G protein), gamma 4 [Source:MGI Symbol;Acc:MGI:102703]
93. Gm11744 38 0.819 - - 0.819 - - - predicted gene 11744, transcript variant X6
94. Dbndd2 ENSMUSG00000017734 34 0.818 - - 0.818 - - - dysbindin (dystrobrevin binding protein 1) domain containing 2 [Source:MGI Symbol;Acc:MGI:106562]
95. Gm9840 154 0.815 - - 0.815 - - - predicted gene 9840, transcript variant X1
96. Prkaa2 ENSMUSG00000028518 148 0.813 - - 0.813 - - - protein kinase, AMP-activated, alpha 2 catalytic subunit [Source:MGI Symbol;Acc:MGI:1336173]
97. Rps12-ps19 ENSMUSG00000082481 30 0.813 - - 0.813 - - - ribosomal protein S12, pseudogene 19 [Source:MGI Symbol;Acc:MGI:3652063]
98. Galnt11 ENSMUSG00000038072 627 0.807 - - 0.807 - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:MGI Symbol;Acc:MGI:2444392]
99. Gm14337 Gm14337 143 0.806 - - 0.806 - - -
100. Gm12963 ENSMUSG00000085517 44 0.805 - - 0.805 - - - predicted gene 12963 [Source:MGI Symbol;Acc:MGI:3651569]

There are 97 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA