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Results for Brca1

Gene Name Gene ID Reads Annotation
Brca1 ENSMUSG00000017146 1661 breast cancer 1, early onset [Source:MGI Symbol;Acc:MGI:104537]







Genes with expression patterns similar to Brca1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Brca1 ENSMUSG00000017146 1661 6 1.000 1.000 1.000 1.000 1.000 1.000 breast cancer 1, early onset [Source:MGI Symbol;Acc:MGI:104537]
2. Akap8 ENSMUSG00000024045 5486 1.452 - 0.732 - - 0.720 - A kinase (PRKA) anchor protein 8 [Source:MGI Symbol;Acc:MGI:1928488]
3. Zfand3 ENSMUSG00000044477 2002 0.941 - 0.941 - - - - zinc finger, AN1-type domain 3 [Source:MGI Symbol;Acc:MGI:1096572]
4. Pdcl ENSMUSG00000009030 3358 0.937 - 0.937 - - - - phosducin-like [Source:MGI Symbol;Acc:MGI:1914716]
5. Arl2 ENSMUSG00000024944 4376 0.935 - 0.935 - - - - ADP-ribosylation factor-like 2 [Source:MGI Symbol;Acc:MGI:1928393]
6. Arhgap12 ENSMUSG00000041225 1893 0.934 - 0.934 - - - - Rho GTPase activating protein 12 [Source:MGI Symbol;Acc:MGI:1922665]
7. Fam129b ENSMUSG00000026796 3211 0.917 - 0.917 - - - - family with sequence similarity 129, member B [Source:MGI Symbol;Acc:MGI:2442910]
8. Fam96b ENSMUSG00000031879 3017 0.913 - 0.913 - - - - family with sequence similarity 96, member B [Source:MGI Symbol;Acc:MGI:1915773]
9. Cdc42ep3 ENSMUSG00000036533 1308 0.893 - 0.893 - - - - CDC42 effector protein (Rho GTPase binding) 3 [Source:MGI Symbol;Acc:MGI:2384718]
10. Mgme1 ENSMUSG00000027424 1011 0.888 - 0.888 - - - - mitochondrial genome maintenance exonuclease 1 [Source:MGI Symbol;Acc:MGI:1921778]
11. Gm14276 ENSMUSG00000082163 796 0.876 - 0.876 - - - - predicted gene 14276 [Source:MGI Symbol;Acc:MGI:3701955]
12. Rspo2 ENSMUSG00000051920 204 0.872 - 0.872 - - - - R-spondin 2 [Source:MGI Symbol;Acc:MGI:1922667]
13. Taf1b ENSMUSG00000059669 413 0.868 - 0.868 - - - - TATA-box binding protein associated factor, RNA polymerase I, B [Source:MGI Symbol;Acc:MGI:109577]
14. 0610005C13Rik ENSMUSG00000109644 478 0.868 - 0.868 - - - - RIKEN cDNA 0610005C13 gene [Source:MGI Symbol;Acc:MGI:1918911]
15. Slc16a9 ENSMUSG00000037762 83 0.865 - 0.865 - - - - solute carrier family 16 (monocarboxylic acid transporters), member 9 [Source:MGI Symbol;Acc:MGI:1914109]
16. Gm4335 ENSMUSG00000097989 113 0.865 - 0.865 - - - - predicted gene 4335 [Source:MGI Symbol;Acc:MGI:3782519]
17. Irgm1 ENSMUSG00000046879, ENSMUSG00000116444 77 0.864 - 0.864 - - - - immunity-related GTPase family M member 1 [Source:NCBI gene;Acc:15944]
18. Scara5 ENSMUSG00000022032 68 0.864 - 0.864 - - - - scavenger receptor class A, member 5 [Source:MGI Symbol;Acc:MGI:1918395]
19. Tmem39a ENSMUSG00000002845 1066 0.863 - 0.863 - - - - transmembrane protein 39a [Source:MGI Symbol;Acc:MGI:1915096]
20. Gm10307 ENSMUSG00000101093 159 0.863 - 0.863 - - - - predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
21. Fam132b 102 0.863 - 0.863 - - - - family with sequence similarity 132, member B, transcript variant X3
22. Zfp947 ENSMUSG00000063383 396 0.862 - 0.862 - - - - zinc finger protein 947 [Source:MGI Symbol;Acc:MGI:3646759]
23. Fam120aos ENSMUSG00000097059 81 0.862 - 0.862 - - - - family with sequence similarity 120A, opposite strand [Source:MGI Symbol;Acc:MGI:1915378]
24. Fndc3a ENSMUSG00000033487 1185 0.862 - 0.862 - - - - fibronectin type III domain containing 3A [Source:MGI Symbol;Acc:MGI:1196463]
25. Phospho2 ENSMUSG00000027088 921 0.862 - 0.862 - - - - phosphatase, orphan 2 [Source:MGI Symbol;Acc:MGI:1920623]
26. Gm8349 ENSMUSG00000098208 124 0.861 - 0.861 - - - - predicted gene 8349 [Source:MGI Symbol;Acc:MGI:3643135]
27. Gm16409 ENSMUSG00000075581 176 0.86 - 0.860 - - - - predicted gene 16409 [Source:MGI Symbol;Acc:MGI:3646708]
28. Gnpda2 ENSMUSG00000029209 182 0.86 - 0.860 - - - - glucosamine-6-phosphate deaminase 2 [Source:MGI Symbol;Acc:MGI:1915230]
29. Hspe1-ps2 ENSMUSG00000049246 2713 0.86 - 0.860 - - - - heat shock protein 1 (chaperonin 10), pseudogene 2 [Source:MGI Symbol;Acc:MGI:1935162]
30. Gm16300 ENSMUSG00000089828 225 0.859 - 0.859 - - - - predicted gene 16300 [Source:MGI Symbol;Acc:MGI:3826587]
31. Gm13652 ENSMUSG00000087333 91 0.859 - 0.859 - - - - predicted gene 13652 [Source:MGI Symbol;Acc:MGI:3650033]
32. Rfx5 ENSMUSG00000005774 204 0.858 - 0.858 - - - - regulatory factor X, 5 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1858421]
33. Smoc2 ENSMUSG00000023886 712 0.858 - 0.858 - - - - SPARC related modular calcium binding 2 [Source:MGI Symbol;Acc:MGI:1929881]
34. Rab3gap1 ENSMUSG00000036104 515 0.858 - 0.858 - - - - RAB3 GTPase activating protein subunit 1 [Source:MGI Symbol;Acc:MGI:2445001]
35. Gm16702 ENSMUSG00000097796 133 0.858 - 0.858 - - - - predicted gene, 16702 [Source:MGI Symbol;Acc:MGI:4439626]
36. Dpy19l4 ENSMUSG00000045205 962 0.858 - 0.858 - - - - dpy-19-like 4 (C. elegans) [Source:MGI Symbol;Acc:MGI:2685869]
37. Pigu ENSMUSG00000038383 705 0.857 - 0.857 - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:MGI Symbol;Acc:MGI:3039607]
38. Tgfbrap1 ENSMUSG00000070939 1413 0.857 - 0.857 - - - - transforming growth factor, beta receptor associated protein 1 [Source:MGI Symbol;Acc:MGI:2447427]
39. Dip2a ENSMUSG00000020231 649 0.856 - 0.856 - - - - disco interacting protein 2 homolog A [Source:MGI Symbol;Acc:MGI:2385920]
40. C2cd2l ENSMUSG00000032120 223 0.856 - 0.856 - - - - C2 calcium-dependent domain containing 2-like [Source:MGI Symbol;Acc:MGI:1919014]
41. Zfp30 ENSMUSG00000047473 562 0.855 - 0.855 - - - - zinc finger protein 30 [Source:MGI Symbol;Acc:MGI:99178]
42. Lamtor2 ENSMUSG00000028062 570 0.855 - 0.855 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:MGI Symbol;Acc:MGI:1932697]
43. Map10 ENSMUSG00000050930 246 0.855 - 0.855 - - - - microtubule-associated protein 10 [Source:MGI Symbol;Acc:MGI:1921643]
44. Usf1 ENSMUSG00000026641 336 0.855 - 0.855 - - - - upstream transcription factor 1 [Source:MGI Symbol;Acc:MGI:99542]
45. 4933415A04Rik ENSMUSG00000045877 412 0.854 - 0.854 - - - - RIKEN cDNA 4933415A04 gene [Source:MGI Symbol;Acc:MGI:1922977]
46. Rrp15 ENSMUSG00000001305 966 0.854 - 0.854 - - - - ribosomal RNA processing 15 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914473]
47. Mogs ENSMUSG00000030036 2072 0.854 - 0.854 - - - - mannosyl-oligosaccharide glucosidase [Source:MGI Symbol;Acc:MGI:1929872]
48. Npr3 ENSMUSG00000022206 2321 0.853 - 0.853 - - - - natriuretic peptide receptor 3 [Source:MGI Symbol;Acc:MGI:97373]
49. Mcam ENSMUSG00000032135 610 0.853 - 0.853 - - - - melanoma cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1933966]
50. Gm11944 ENSMUSG00000084941 286 0.852 - 0.852 - - - - predicted gene 11944 [Source:MGI Symbol;Acc:MGI:3702312]
51. Ccar2 ENSMUSG00000033712 2357 0.851 - 0.851 - - - - cell cycle activator and apoptosis regulator 2 [Source:MGI Symbol;Acc:MGI:2444228]
52. Gstm5 ENSMUSG00000004032 1525 0.851 - 0.851 - - - - glutathione S-transferase, mu 5 [Source:MGI Symbol;Acc:MGI:1309466]
53. Tmem243 ENSMUSG00000079659 181 0.851 - 0.851 - - - - transmembrane protein 243, mitochondrial [Source:MGI Symbol;Acc:MGI:3606159]
54. Gm10689 ENSMUSG00000074412 328 0.851 - 0.851 - - - - predicted gene 10689 [Source:MGI Symbol;Acc:MGI:3642613]
55. Pank1 ENSMUSG00000033610 1083 0.85 - 0.850 - - - - pantothenate kinase 1 [Source:MGI Symbol;Acc:MGI:1922985]
56. Med13l ENSMUSG00000018076 1863 0.85 - 0.850 - - - - mediator complex subunit 13-like [Source:MGI Symbol;Acc:MGI:2670178]
57. Pdgfb ENSMUSG00000000489 325 0.85 - 0.850 - - - - platelet derived growth factor, B polypeptide [Source:MGI Symbol;Acc:MGI:97528]
58. Map3k1 ENSMUSG00000021754 2844 0.849 - 0.849 - - - - mitogen-activated protein kinase kinase kinase 1 [Source:MGI Symbol;Acc:MGI:1346872]
59. Klf11 ENSMUSG00000020653 838 0.849 - 0.849 - - - - Kruppel-like factor 11 [Source:MGI Symbol;Acc:MGI:2653368]
60. Phkb ENSMUSG00000036879 701 0.848 - 0.848 - - - - phosphorylase kinase beta [Source:MGI Symbol;Acc:MGI:97578]
61. Oprm1 ENSMUSG00000000766 292 0.847 - 0.847 - - - - opioid receptor, mu 1 [Source:MGI Symbol;Acc:MGI:97441]
62. Tceal3 ENSMUSG00000044550 742 0.846 - 0.846 - - - - transcription elongation factor A (SII)-like 3 [Source:MGI Symbol;Acc:MGI:1913354]
63. Chfr ENSMUSG00000014668 1287 0.846 - 0.846 - - - - checkpoint with forkhead and ring finger domains [Source:MGI Symbol;Acc:MGI:2444898]
64. Tapt1 ENSMUSG00000046985 1206 0.845 - 0.845 - - - - transmembrane anterior posterior transformation 1 [Source:MGI Symbol;Acc:MGI:2683537]
65. Prcc ENSMUSG00000004895 527 0.845 - 0.845 - - - - papillary renal cell carcinoma (translocation-associated) [Source:MGI Symbol;Acc:MGI:2137738]
66. Adamts1 ENSMUSG00000022893 1502 0.845 - 0.845 - - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 [Source:MGI Symbol;Acc:MGI:109249]
67. Wnk3 ENSMUSG00000041245 552 0.845 - 0.845 - - - - WNK lysine deficient protein kinase 3 [Source:MGI Symbol;Acc:MGI:2652875]
68. Cyr61 ENSMUSG00000028195 563 0.843 - 0.843 - - - - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
69. Dido1 ENSMUSG00000038914 1891 0.843 - 0.843 - - - - death inducer-obliterator 1 [Source:MGI Symbol;Acc:MGI:1344352]
70. Gm26822 ENSMUSG00000096921 421 0.843 - 0.843 - - - - predicted gene, 26822 [Source:MGI Symbol;Acc:MGI:5477316]
71. Krr1 ENSMUSG00000063334 2712 0.842 - 0.842 - - - - KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:MGI Symbol;Acc:MGI:1289274]
72. Rrnad1 ENSMUSG00000004896 798 0.842 - 0.842 - - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:MGI Symbol;Acc:MGI:2387197]
73. Usp2 ENSMUSG00000032010 525 0.841 - 0.841 - - - - ubiquitin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1858178]
74. Heatr3 ENSMUSG00000031657 1306 0.841 - 0.841 - - - - HEAT repeat containing 3 [Source:MGI Symbol;Acc:MGI:2444491]
75. Mtx3 ENSMUSG00000021704 616 0.84 - 0.840 - - - - metaxin 3 [Source:MGI Symbol;Acc:MGI:2686040]
76. Gm15879 ENSMUSG00000084790 387 0.84 - 0.840 - - - - predicted gene 15879 [Source:MGI Symbol;Acc:MGI:3802012]
77. AW209491 ENSMUSG00000039182 618 0.839 - 0.839 - - - - expressed sequence AW209491 [Source:MGI Symbol;Acc:MGI:2145422]
78. Vps9d1 ENSMUSG00000001062 694 0.839 - 0.839 - - - - VPS9 domain containing 1 [Source:MGI Symbol;Acc:MGI:1914143]
79. Slc50a1 ENSMUSG00000027953 774 0.839 - 0.839 - - - - solute carrier family 50 (sugar transporter), member 1 [Source:MGI Symbol;Acc:MGI:107417]
80. Erlin1 ENSMUSG00000025198 667 0.839 - 0.839 - - - - ER lipid raft associated 1 [Source:MGI Symbol;Acc:MGI:2387613]
81. Arhgap23 ENSMUSG00000049807 1316 0.838 - 0.838 - - - - Rho GTPase activating protein 23 [Source:MGI Symbol;Acc:MGI:3697726]
82. Fam3c ENSMUSG00000029672 1429 0.838 - 0.838 - - - - family with sequence similarity 3, member C [Source:MGI Symbol;Acc:MGI:107892]
83. Crcp ENSMUSG00000025532 699 0.838 - 0.838 - - - - calcitonin gene-related peptide-receptor component protein [Source:MGI Symbol;Acc:MGI:1100818]
84. 0610010F05Rik ENSMUSG00000042208 755 0.837 - 0.837 - - - - RIKEN cDNA 0610010F05 gene [Source:MGI Symbol;Acc:MGI:1918925]
85. Zfp609 ENSMUSG00000040524 1316 0.837 - 0.837 - - - - zinc finger protein 609 [Source:MGI Symbol;Acc:MGI:2674092]
86. Lig4 ENSMUSG00000049717 564 0.836 - 0.836 - - - - ligase IV, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:1335098]
87. Zswim7 ENSMUSG00000014243 799 0.836 - 0.836 - - - - zinc finger SWIM-type containing 7 [Source:MGI Symbol;Acc:MGI:1916997]
88. Phyh ENSMUSG00000026664 659 0.835 - 0.835 - - - - phytanoyl-CoA hydroxylase [Source:MGI Symbol;Acc:MGI:891978]
89. Ubox5 ENSMUSG00000027300 434 0.834 - 0.834 - - - - U box domain containing 5 [Source:MGI Symbol;Acc:MGI:2154658]
90. Cryzl1 ENSMUSG00000058240 2195 0.834 - 0.834 - - - - crystallin, zeta (quinone reductase)-like 1 [Source:MGI Symbol;Acc:MGI:1913859]
91. Aen ENSMUSG00000030609 963 0.834 - 0.834 - - - - apoptosis enhancing nuclease [Source:MGI Symbol;Acc:MGI:1915298]
92. Heatr5a ENSMUSG00000035181 1099 0.833 - 0.833 - - - - HEAT repeat containing 5A [Source:MGI Symbol;Acc:MGI:2444133]
93. Ednra ENSMUSG00000031616 1286 0.832 - 0.832 - - - - endothelin receptor type A [Source:MGI Symbol;Acc:MGI:105923]
94. Ube2e2 ENSMUSG00000058317 729 0.83 - 0.830 - - - - ubiquitin-conjugating enzyme E2E 2 [Source:MGI Symbol;Acc:MGI:2384997]
95. Sec11c ENSMUSG00000024516 640 0.83 - 0.830 - - - - SEC11 homolog C, signal peptidase complex subunit [Source:MGI Symbol;Acc:MGI:1913536]
96. Gm12005 ENSMUSG00000081631 601 0.83 - 0.830 - - - - predicted gene 12005 [Source:MGI Symbol;Acc:MGI:3651316]
97. Ccs ENSMUSG00000034108 558 0.828 - 0.828 - - - - copper chaperone for superoxide dismutase [Source:MGI Symbol;Acc:MGI:1333783]
98. Enah ENSMUSG00000022995 1908 0.828 - 0.828 - - - - ENAH actin regulator [Source:MGI Symbol;Acc:MGI:108360]
99. Mex3d ENSMUSG00000048696 2206 0.828 - 0.828 - - - - mex3 RNA binding family member D [Source:MGI Symbol;Acc:MGI:2681847]
100. Pgap1 ENSMUSG00000073678 833 0.827 - 0.827 - - - - post-GPI attachment to proteins 1 [Source:MGI Symbol;Acc:MGI:2443342]

There are 179 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA