Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for BX539313.1

Gene Name Gene ID Reads Annotation
BX539313.1 ENSDARG00000097396 1277










Genes with expression patterns similar to BX539313.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. BX539313.1 ENSDARG00000097396 1277 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. pou3f3a ENSDARG00000042032 2835 2.172 0.706 - - - - 0.722 - - 0.744 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
3. wu:fu71h07 ENSDARG00000103860 558 1.602 - 0.841 - - - 0.761 - - - wu:fu71h07 [Source:ZFIN;Acc:ZDB-GENE-050302-121]
4. apex1 ENSDARG00000045843 6345 1.587 0.838 - - - - - 0.749 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
5. top2a ENSDARG00000024488 4273 1.576 - - - - - - 0.741 - 0.835 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
6. vps37a ENSDARG00000017119, ENSDARG00000110505 772 1.57 - - - - - 0.733 0.837 - - vacuolar protein sorting 37A [Source:ZFIN;Acc:ZDB-GENE-030131-8312]
7. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.559 - - - - - - 0.765 - 0.794 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
8. si:dkey-67c22.2 ENSDARG00000055389 6410 1.539 - 0.779 - - - - 0.760 - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
9. pcdh19 ENSDARG00000034344 2378 1.528 - - - - - 0.801 - - 0.727 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
10. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.527 - - - - - - 0.826 - 0.701 ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
11. TUSC3 ENSDARG00000078854 1021 1.517 - - - - - 0.801 - - 0.716 tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
12. kif22 ENSDARG00000102624 3694 1.514 - 0.778 - - - - - - 0.736 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
13. mllt1 mllt1 974 1.514 - - - - - 0.760 0.754 - -
14. meis3 ENSDARG00000002795 2509 1.514 - - - - - 0.808 0.706 - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
15. med16 ENSDARG00000040779, ENSDARG00000116309 939 1.51 - - - - - 0.786 - - 0.724 mediator complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-090306-4]
16. u2af1 ENSDARG00000015325 3217 1.506 0.790 - - - - - - - 0.716 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
17. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.505 - - - - - - 0.730 - 0.775 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
18. whsc1l1 8544 1.502 - - - - - 0.797 - - 0.705 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
19. timm23 timm23 2712 1.493 0.747 0.746 - - - - - - -
20. rtfdc1 1792 1.492 - 0.768 - - - - - 0.724 - replication termination factor 2 domain containing 1, transcript variant X2
21. smarcd3a ENSDARG00000038786 2894 1.486 0.742 - - - - 0.744 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
22. myoz2a ENSDARG00000012311 1373 1.486 0.763 - - - - 0.723 - - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
23. snrpa ENSDARG00000018890 4593 1.481 - - - - - 0.717 - - 0.764 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
24. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 1.479 - - - - - 0.775 - - 0.704 bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
25. hnrnph1 ENSDARG00000040881 304 1.479 - 0.762 - - - 0.717 - - - heterogeneous nuclear ribonucleoprotein H1 [Source:ZFIN;Acc:ZDB-GENE-040426-1856]
26. ankrd28b ENSDARG00000009023 960 1.477 - 0.755 - - - - 0.722 - - ankyrin repeat domain 28b [Source:ZFIN;Acc:ZDB-GENE-070622-4]
27. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.475 - - - - - - 0.709 - 0.766 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
28. marcksa ENSDARG00000004049 2518 1.472 - - - - - 0.758 - - 0.714 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
29. foxo3b ENSDARG00000042904 5046 1.471 - - - - - 0.744 0.727 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
30. scoca ENSDARG00000087333 1739 1.468 0.734 - - - - - 0.734 - - short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
31. kdm6bb ENSDARG00000056929 4807 1.465 - - - - - - - 0.714 0.751 lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
32. hnrpl 6412 1.464 - - - - - 0.763 - - 0.701 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
33. prpf38a ENSDARG00000039213, ENSDARG00000116046 1537 1.463 - - - - - 0.714 - - 0.749 pre-mRNA processing factor 38A [Source:ZFIN;Acc:ZDB-GENE-040801-225]
34. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.459 0.739 - - - - - 0.720 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
35. rbm25 rbm25 3629 1.456 - - - - - 0.741 - - 0.715
36. creb1a ENSDARG00000053586 5068 1.452 - - - - - 0.731 - - 0.721 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
37. kifc1 ENSDARG00000001558 6658 1.451 - - - - - 0.706 0.745 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
38. BAZ2B BAZ2B 3285 1.449 - - - - - 0.739 0.710 - -
39. parp2 ENSDARG00000079202, ENSDARG00000111737 878 1.448 - - - - - 0.716 0.732 - - poly (ADP-ribose) polymerase 2 [Source:ZFIN;Acc:ZDB-GENE-031113-6]
40. Sep-06 Sep-06 5465 1.446 - - - - - - 0.709 - 0.737
41. syncripl ENSDARG00000026723 3889 1.438 - 0.714 - - - 0.724 - - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
42. cct7 ENSDARG00000007385 1513 1.435 0.712 0.723 - - - - - - - chaperonin containing TCP1, subunit 7 (eta) [Source:ZFIN;Acc:ZDB-GENE-020419-7]
43. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.434 - - - - - - 0.714 - 0.720 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
44. gltscr1l gltscr1l 782 1.431 0.727 - 0.704 - - - - - -
45. nhlh2 ENSDARG00000025495 1860 1.427 - - - - - 0.715 - - 0.712 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
46. tmem35 ENSDARG00000052567 5685 1.427 - - - - - 0.707 - - 0.720 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
47. C8H1orf106 C8H1orf106 2690 1.423 - - - - - 0.718 - - 0.705
48. ptbp2b ENSDARG00000015901 2458 1.423 - - - - - - 0.705 - 0.718 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
49. hnrnpa1 hnrnpa1 1302 1.413 - 0.708 - - - - 0.705 - -
50. SMAD4_1 SMAD4_1 377 0.966 - 0.966 - - - - - - -
51. HIP1R HIP1R 490 0.948 - 0.948 - - - - - - -
52. armc1 ENSDARG00000013861 175 0.921 - 0.921 - - - - - - - armadillo repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-33]
53. amdhd2 ENSDARG00000100376 656 0.92 - 0.920 - - - - - - - amidohydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1871]
54. zbtb1 ENSDARG00000023040, ENSDARG00000112571 211 0.919 - 0.919 - - - - - - - zinc finger and BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-126]
55. rgs19 ENSDARG00000077385 783 0.917 - 0.917 - - - - - - - regulator of G protein signaling 19 [Source:ZFIN;Acc:ZDB-GENE-080723-72]
56. ctdnep1b ENSDARG00000035781 65 0.915 - 0.915 - - - - - - - CTD nuclear envelope phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-041114-152]
57. mat2al ENSDARG00000063665, ENSDARG00000109637, ENSDARG00000111463 447 0.912 - 0.912 - - - - - - - methionine adenosyltransferase II, alpha-like [Source:ZFIN;Acc:ZDB-GENE-060421-5255]
58. trpm4 trpm4 501 0.908 - 0.908 - - - - - - -
59. ube2j2 ENSDARG00000061161 844 0.908 - 0.908 - - - - - - - ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-28]
60. prkra ENSDARG00000076718 606 0.903 - 0.903 - - - - - - - protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
61. ttc7b ENSDARG00000061207 710 0.899 - 0.899 - - - - - - - tetratricopeptide repeat domain 7B [Source:ZFIN;Acc:ZDB-GENE-070105-3]
62. C3H17orf103 C3H17orf103 973 0.899 - 0.899 - - - - - - -
63. erlin2 ENSDARG00000095968, ENSDARG00000110551 1023 0.897 - 0.897 - - - - - - - ER lipid raft associated 2 [Source:NCBI gene;Acc:100151163]
64. arhgef16 ENSDARG00000077114 759 0.893 - 0.893 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 16 [Source:ZFIN;Acc:ZDB-GENE-081104-446]
65. tgfbr2 tgfbr2 1117 0.891 - 0.891 - - - - - - -
66. caspb ENSDARG00000052039 4329 0.885 - 0.885 - - - - - - - caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
67. CABZ01085888.1 CABZ01085888.1 868 0.882 - 0.882 - - - - - - -
68. wdr37 ENSDARG00000074611 468 0.88 - 0.880 - - - - - - - WD repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-030131-8101]
69. afap1 ENSDARG00000055284 730 0.879 - 0.879 - - - - - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
70. med25 ENSDARG00000038005, ENSDARG00000115713 1305 0.875 - - - - - - 0.875 - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
71. fbxo42 ENSDARG00000087545 262 0.874 - 0.874 - - - - - - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
72. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.873 - 0.873 - - - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
73. tex261 ENSDARG00000044584 513 0.872 - 0.872 - - - - - - - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
74. akap11 ENSDARG00000075435 654 0.872 - - - - - 0.872 - - - A kinase (PRKA) anchor protein 11 [Source:ZFIN;Acc:ZDB-GENE-090804-1]
75. sh3pxd2aa ENSDARG00000060148 913 0.87 - 0.870 - - - - - - - SH3 and PX domains 2Aa [Source:ZFIN;Acc:ZDB-GENE-060503-271]
76. tmem8a ENSDARG00000032795 677 0.87 - 0.870 - - - - - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
77. rnf141 ENSDARG00000041802, ENSDARG00000113109 531 0.87 - 0.870 - - - - - - - ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]
78. hmox2a ENSDARG00000055101, ENSDARG00000114695 815 0.87 - 0.870 - - - - - - - heme oxygenase 2a [Source:ZFIN;Acc:ZDB-GENE-040914-13]
79. RELL1 ENSDARG00000018312 579 0.868 - 0.868 - - - - - - - RELT like 1 [Source:ZFIN;Acc:ZDB-GENE-161213-2]
80. exoc3l4 ENSDARG00000058180 923 0.867 - 0.867 - - - - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
81. anxa13 ENSDARG00000013976 2476 0.866 - - - - - - 0.866 - - annexin A13 [Source:ZFIN;Acc:ZDB-GENE-010406-1]
82. tbcelb ENSDARG00000019525 299 0.866 - 0.866 - - - - - - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
83. cdc20 ENSDARG00000100741 3264 0.865 - 0.865 - - - - - - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
84. tbl1xr1b ENSDARG00000008966 2203 0.865 - 0.865 - - - - - - - transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
85. GEMIN7 ENSDARG00000041011 529 0.864 - 0.864 - - - - - - - gem (nuclear organelle) associated protein 7 [Source:ZFIN;Acc:ZDB-GENE-120409-2]
86. trmt1l ENSDARG00000042057 466 0.864 - 0.864 - - - - - - - tRNA methyltransferase 1-like [Source:ZFIN;Acc:ZDB-GENE-041014-189]
87. btbd6a ENSDARG00000076440 748 0.864 - 0.864 - - - - - - - BTB (POZ) domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-080218-26]
88. si:ch211-89o5.1 si:ch211-89o5.1 91 0.863 - 0.863 - - - - - - -
89. smg5 ENSDARG00000041481 1286 0.863 - - - - - - 0.863 - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
90. scinla ENSDARG00000102415, ENSDARG00000117110 1996 0.859 - 0.859 - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
91. pcnx 689 0.859 - 0.859 - - - - - - - pecanex homolog (Drosophila), transcript variant X5
92. wdr18 ENSDARG00000041113 810 0.859 - 0.859 - - - - - - - WD repeat domain 18 [Source:ZFIN;Acc:ZDB-GENE-040905-4]
93. rnf34a ENSDARG00000038300 179 0.858 - 0.858 - - - - - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
94. tomm40l ENSDARG00000036721 1714 0.857 0.857 - - - - - - - - translocase of outer mitochondrial membrane 40 homolog, like [Source:ZFIN;Acc:ZDB-GENE-040426-2319]
95. ISCA2 ENSDARG00000038154 489 0.857 - 0.857 - - - - - - - iron-sulfur cluster assembly 2 [Source:ZFIN;Acc:ZDB-GENE-131121-486]
96. C13H10orf32 C13H10orf32 465 0.856 - 0.856 - - - - - - -
97. fkbp7 ENSDARG00000010962 2986 0.854 - 0.854 - - - - - - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
98. RBM26 ENSDARG00000104130 1012 0.854 0.854 - - - - - - - - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
99. ccnt1 ENSDARG00000017525 1888 0.852 - - - - - 0.852 - - - cyclin T1 [Source:ZFIN;Acc:ZDB-GENE-030131-6397]
100. pspc1 ENSDARG00000006621 966 0.852 - 0.852 - - - - - - - paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]

There are 1010 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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