Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for BX004873.3

Gene Name Gene ID Reads Annotation
BX004873.3 BX004873.3 59










Genes with expression patterns similar to BX004873.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. BX004873.3 BX004873.3 59 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. cyp3c4 ENSDARG00000070021 95 2 1.000 - - - - - 1.000 - - cytochrome P450, family 3, subfamily C, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-060929-96]
3. ccdc170 ENSDARG00000016161 18 2 1.000 - - - - - 1.000 - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
4. CABZ01064671.1 ENSDARG00000039935 21 2 1.000 - - - - - 1.000 - -
5. zbtb38 ENSDARG00000100607 17 1.953 - 0.953 - - - - 1.000 - - zinc finger and BTB domain containing 38 [Source:ZFIN;Acc:ZDB-GENE-091204-308]
6. si:ch211-173n18.4 129 1.952 1.000 0.952 - - - - - - - si:ch211-173n18.4, transcript variant X1
7. ptn ENSDARG00000102340 229 1.909 0.957 - 0.952 - - - - - - pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
8. tmeff1a ENSDARG00000008191 74 1.904 - 0.951 - - - - 0.953 - - transmembrane protein with EGF-like and two follistatin-like domains 1a [Source:ZFIN;Acc:ZDB-GENE-070912-294]
9. pm20d1.1 ENSDARG00000037551 11 1.898 0.898 - - - - - 1.000 - - peptidase M20 domain containing 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-051120-102]
10. CU459094.1 ENSDARG00000110517 17 1.878 0.878 - - - - - 1.000 - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
11. trip4 ENSDARG00000098074 79 1.85 0.878 - 0.972 - - - - - - thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]
12. spef2 ENSDARG00000098330 59 1.834 0.955 - - - 0.879 - - - - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
13. arhgap25 ENSDARG00000061784 112 1.813 - 0.871 0.942 - - - - - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
14. lrtomt lrtomt 39 1.809 - 0.923 - - - - 0.886 - -
15. WDR93 ENSDARG00000087191 51 1.806 1.000 - - - - - 0.806 - - WD repeat domain 93 [Source:ZFIN;Acc:ZDB-GENE-161017-52]
16. elna 38 1.768 0.878 0.890 - - - - - - - elastin a, transcript variant X20
17. CMA1_4 CMA1_4 23 1.756 - - - - 0.756 - 1.000 - -
18. crfb2 ENSDARG00000040332, ENSDARG00000109306, ENSDARG00000116866 21 1.754 - 0.975 - - - - 0.779 - - cytokine receptor family member b2 [Source:ZFIN;Acc:ZDB-GENE-070905-2]
19. TMC5 ENSDARG00000013252 22 1.753 1.000 - - - 0.753 - - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
20. CR388231.1 ENSDARG00000098710 153 1.753 - 0.821 - - - - 0.932 - -
21. ngfrb ENSDARG00000089223, ENSDARG00000115390 41 1.747 - - 0.970 - 0.777 - - - - nerve growth factor receptor b [Source:ZFIN;Acc:ZDB-GENE-070606-2]
22. fabp7b ENSDARG00000034650 397 1.739 - - 0.739 - - - 1.000 - - fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
23. egr3 ENSDARG00000089156 71 1.734 - 0.898 - - - - 0.836 - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
24. TRAK1 212 1.734 - 0.889 - - - - 0.845 - - trafficking protein, kinesin binding 1, transcript variant X6
25. rergla ENSDARG00000019396 42 1.733 - 1.000 - - - - 0.733 - - RERG/RAS-like a [Source:ZFIN;Acc:ZDB-GENE-040718-198]
26. CDH24 CDH24 325 1.719 - 0.808 0.911 - - - - - -
27. plxnb3 ENSDARG00000032990 98 1.706 0.784 - 0.922 - - - - - - plexin B3 [Source:ZFIN;Acc:ZDB-GENE-081104-53]
28. ANKS3 ENSDARG00000038557 235 1.703 - 0.913 0.790 - - - - - - ankyrin repeat and sterile alpha motif domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080204-51]
29. kin ENSDARG00000045515 109 1.687 - 0.805 - - - - 0.882 - - Kin17 DNA and RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3689]
30. foxi1 ENSDARG00000104566 176 1.682 - 0.975 0.707 - - - - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
31. cuedc1a ENSDARG00000068716 232 1.68 - 0.957 - - - - 0.723 - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
32. gtpbp3 ENSDARG00000018650, ENSDARG00000111427 70 1.675 0.928 - - - - 0.747 - - - GTP binding protein 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050522-335]
33. si:dkey-24i24.3 ENSDARG00000088452 27 1.668 - - 0.963 - - - 0.705 - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
34. sdccag8 ENSDARG00000078947 68 1.662 0.841 0.821 - - - - - - - serologically defined colon cancer antigen 8 [Source:ZFIN;Acc:ZDB-GENE-090313-318]
35. THEG ENSDARG00000078644 121 1.657 - 0.733 0.924 - - - - - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
36. hoxc11b ENSDARG00000102631 808 1.654 0.953 0.701 - - - - - - - homeobox C11b [Source:ZFIN;Acc:ZDB-GENE-000822-3]
37. rbks ENSDARG00000019877 126 1.65 - 0.933 - - - 0.717 - - - ribokinase [Source:ZFIN;Acc:ZDB-GENE-040625-112]
38. PDGFB_1 PDGFB_1 139 1.648 - 0.799 - - - 0.849 - - -
39. bmp6 ENSDARG00000015686 211 1.648 - 0.700 0.948 - - - - - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
40. FAM196A 82 1.644 - - 0.863 - - - 0.781 - - family with sequence similarity 196 member A
41. armc4 ENSDARG00000055128 220 1.641 - 0.806 - - - - 0.835 - - armadillo repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-100316-7]
42. spata6 ENSDARG00000021115 128 1.638 - 0.824 - - - 0.814 - - - spermatogenesis associated 6 [Source:ZFIN;Acc:ZDB-GENE-050417-351]
43. diras1a ENSDARG00000028066 126 1.636 - 0.760 - - - - 0.876 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
44. admb ENSDARG00000069027 67 1.608 - 0.861 - - - 0.747 - - - adrenomedullin b [Source:ZFIN;Acc:ZDB-GENE-120221-6]
45. si:dkey-29j8.5 si:dkey-29j8.5 9 1.595 - - - - - 0.816 0.779 - -
46. CSPP1 68 1.587 0.845 - - - - 0.742 - - - centrosome and spindle pole associated protein 1, transcript variant X6
47. mif4gdb ENSDARG00000102578 31 1.571 - - - 0.708 0.863 - - - - MIF4G domain containing b [Source:ZFIN;Acc:ZDB-GENE-050227-7]
48. znhit3 ENSDARG00000023950 61 1.536 - 0.738 - - - - 0.798 - - zinc finger, HIT-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1114]
49. fgfbp1 fgfbp1 445 1.532 - 0.765 0.767 - - - - - -
50. nme5 ENSDARG00000041617 135 1.529 - 0.798 - - - - 0.731 - - NME/NM23 family member 5 [Source:ZFIN;Acc:ZDB-GENE-040718-221]
51. EML6 250 1.525 - 0.724 - - - - 0.801 - - echinoderm microtubule associated protein like 6
52. CABZ01073795.1 ENSDARG00000010729 52 1.485 - 0.747 - - 0.738 - - - - interferon-induced protein 44 [Source:NCBI gene;Acc:795887]
53. tsnaxip1 ENSDARG00000030512 197 1.461 0.706 0.755 - - - - - - - translin-associated factor X interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-39]
54. trim2a ENSDARG00000031817 224 1.455 0.739 0.716 - - - - - - - tripartite motif containing 2a [Source:ZFIN;Acc:ZDB-GENE-050327-99]
55. slc25a3a ENSDARG00000027424 11 1 - - - - - - 1.000 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1673]
56. wu:fd55e03 wu:fd55e03 41 1 1.000 - - - - - - - -
57. CCDC178 4 1 1.000 - - - - - - - - coiled-coil domain containing 178, transcript variant X3
58. CT573476.1 CT573476.1 74 1 - 1.000 - - - - - - -
59. ENDOD1 ENDOD1 1 1 - - - - - - 1.000 - -
60. si:ch211-64c10.1 si:ch211-64c10.1 21 1 1.000 - - - - - - - -
61. si:dkey-189j19.1 si:dkey-189j19.1 0 1 - - - - - - 1.000 - -
62. rag2 ENSDARG00000052121 15 1 - - - - - - 1.000 - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
63. slc13a5 slc13a5 15 1 1.000 - - - - - - - -
64. prl ENSDARG00000037946 80 1 - - - - - - 1.000 - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
65. rnf213b ENSDARG00000103551 63 1 1.000 - - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
66. CNTNAP3 ENSDARG00000067824 25 1 - - - - - - 1.000 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
67. kif3cb ENSDARG00000079500 935 1 - - - - - - 1.000 - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
68. ca15b ENSDARG00000040510 5 1 1.000 - - - - - - - - carbonic anhydrase XVb [Source:ZFIN;Acc:ZDB-GENE-040426-2222]
69. clcf1 ENSDARG00000076140 5 1 1.000 - - - - - - - - cardiotrophin-like cytokine factor 1 [Source:ZFIN;Acc:ZDB-GENE-110411-244]
70. ELMO1 ENSDARG00000098753 114 1 1.000 - - - - - - - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
71. MAP3K2 ENSDARG00000062884 34 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
72. BX005294.2 ENSDARG00000109361 3 1 - - - - - - 1.000 - -
73. tor1l1 ENSDARG00000055856 1 1 1.000 - - - - - - - - torsin family 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-080723-36]
74. EPS8 78 1 1.000 - - - - - - - - epidermal growth factor receptor pathway substrate 8, transcript variant X14
75. LRRK1_1 LRRK1_1 11 1 1.000 - - - - - - - -
76. PARP4 ENSDARG00000069934 70 1 1.000 - - - - - - - - poly (ADP-ribose) polymerase family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-387]
77. Metazoa_SRP_6 Metazoa_SRP_6 7 1 1.000 - - - - - - - -
78. efhb ENSDARG00000069703 9 1 1.000 - - - - - - - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
79. gaa ENSDARG00000090714 19 1 - - - - - - 1.000 - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
80. CR388416.2 CR388416.2 3 1 1.000 - - - - - - - -
81. CABZ01059392.1 ENSDARG00000063108 3 1 1.000 - - - - - - - - uncharacterized LOC100334305 [Source:NCBI gene;Acc:100334305]
82. kcnq2a ENSDARG00000075307 7 1 1.000 - - - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
83. eif2b5 ENSDARG00000074995 8 1 1.000 - - - - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
84. st8sia7.1 ENSDARG00000054211 34 1 1.000 - - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 7.1 [Source:ZFIN;Acc:ZDB-GENE-090504-4]
85. BX927064.1 BX927064.1 46 1 1.000 - - - - - - - -
86. si:ch73-83c10.2 si:ch73-83c10.2 22 1 - - - - - - 1.000 - -
87. si:dkey-24p1.7 ENSDARG00000089404 7 1 1.000 - - - - - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
88. ZNF512B ENSDARG00000071055 7 1 - - - - - - 1.000 - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
89. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 1.000 - - - - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
90. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 1.000 - - - - - - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
91. MYO9B ENSDARG00000078313 97 1 - - - - - - 1.000 - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
92. PAQR8 ENSDARG00000088828 26 1 1.000 - - - - - - - - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
93. sytl4 ENSDARG00000102433 19 1 1.000 - - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
94. si:ch211-203k16.3 ENSDARG00000069305 21 1 1.000 - - - - - - - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
95. gpr19 ENSDARG00000102226 17 1 - - - - - - 1.000 - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
96. plcd3b ENSDARG00000079572 64 1 1.000 - - - - - - - - phospholipase C, delta 3b [Source:ZFIN;Acc:ZDB-GENE-081222-2]
97. zgc:174224 ENSDARG00000093875 4 1 - - - - - - 1.000 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
98. trim3a ENSDARG00000063711 44 1 - - - - - - 1.000 - - tripartite motif containing 3a [Source:ZFIN;Acc:ZDB-GENE-080522-4]
99. cyp2k18 ENSDARG00000104593 27 1 1.000 - - - - - - - - cytochrome P450, family 2, subfamily K, polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1584]
100. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1 - - - - - - 1.000 - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]

There are 1357 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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