Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for BRT-1

Gene Name Gene ID Reads Annotation
BRT-1 BRT-1 26083











Genes with expression patterns similar to BRT-1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. BRT-1 BRT-1 26083 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CHMP4B ENSGALG00000002095 17422 1.85 - - - - - - 0.997 - - 0.853 charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
3. PTX3 ENSGALG00000028284 2984 1.746 - - - - - - - 0.826 - 0.920 pentraxin 3 [Source:NCBI gene;Acc:548626]
4. AP2M1 ENSGALG00000008432 16249 1.74 - - - - - - 0.994 0.746 - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
5. C1H21ORF33 ENSGALG00000019171 8910 1.719 - - - - - - 0.993 - - 0.726 chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
6. MYOCD ENSGALG00000001021 351 1.683 - - - - - - - 0.763 - 0.920 myocardin [Source:NCBI gene;Acc:427790]
7. C1QTNF3 ENSGALG00000027887 8646 1.66 - - - - 0.841 - 0.819 - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
8. CPT2 ENSGALG00000010681 3211 1.64 - - - - - - - 0.753 - 0.887 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
9. COL5A2 ENSGALG00000031112 18358 1.616 - - - - - - - 0.735 - 0.881 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
10. GTPBP4 ENSGALG00000006703 16183 1.598 - - - - - - - 0.776 - 0.822 GTP binding protein 4 [Source:NCBI gene;Acc:420458]
11. C9orf64 ENSGALG00000012589 6097 1.592 - - - - - - - 0.754 - 0.838 chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
12. POLR1B ENSGALG00000032273 3845 1.577 - - - - - - - 0.726 - 0.851 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
13. TPM1 ENSGALG00000003521 11894 1.573 - - - 0.714 0.859 - - - - - tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
14. SNX12 ENSGALG00000005659 9503 1.561 - - - - - - - 0.762 - 0.799 sorting nexin 12 [Source:NCBI gene;Acc:428704]
15. TXNDC5 ENSGALG00000012784 4678 1.552 - - - - - - - - 0.733 0.819 thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
16. TANK ENSGALG00000011131 3382 1.533 - - - - - - - 0.717 - 0.816 TRAF family member associated NFKB activator [Source:NCBI gene;Acc:424190]
17. SRF ENSGALG00000032029 6983 1.533 - - - - - - - 0.813 - 0.720 serum response factor [Source:NCBI gene;Acc:396103]
18. CAMSAP1 ENSGALG00000001692 2617 1.511 - - - - - - - 0.725 - 0.786 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
19. LEPROT ENSGALG00000011047 7132 1.462 - - - - - - - 0.744 - 0.718 leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
20. CCNK ENSGALG00000011138 6416 1.453 - - - - - - - 0.702 - 0.751 cyclin K [Source:NCBI gene;Acc:423446]
21. RAB12 ENSGALG00000033608 14160 1.432 - - - - - - - 0.703 - 0.729 RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
22. gga-mir-762 ENSGALG00000025437 24823 0.994 - - - - - - 0.994 - - - gga-mir-762 [Source:miRBase;Acc:MI0008209]
23. PRRX1 ENSGALG00000003324 4859 0.992 - - - - - - 0.992 - - - paired related homeobox 1 [Source:NCBI gene;Acc:373941]
24. THBS4 ENSGALG00000014804 4228 0.992 - - - - - - 0.992 - - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
25. NAP1L4 ENSGALG00000006446 10868 0.992 - - - - - - 0.992 - - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
26. TUSC3 ENSGALG00000013674 2848 0.992 - - - - - - 0.992 - - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
27. MRPS27 ENSGALG00000015002 6541 0.992 - - - - - - 0.992 - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
28. PIK3C2B ENSGALG00000037043 4522 0.992 - - - - - - 0.992 - - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
29. ENSGALG00000001861 ENSGALG00000001861 10150 0.992 - - - - - - 0.992 - - -
30. ARCN1 ENSGALG00000007430 21499 0.992 - - - - - - 0.992 - - - archain 1 [Source:NCBI gene;Acc:770561]
31. WDYHV1 ENSGALG00000030059 2961 0.992 - - - - - - 0.992 - - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
32. HSPA14 ENSGALG00000035201 7372 0.992 - - - - - - 0.992 - - - heat shock protein family A (Hsp70) member 14
33. TDP2 ENSGALG00000013637 6595 0.992 - - - - - - 0.992 - - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
34. UTP14A ENSGALG00000024039 8532 0.992 - - - - - - 0.992 - - - UTP14A small subunit processome component
35. ECE-1 ECE-1 3057 0.992 - - - - - - 0.992 - - -
36. MAPKAPK2 ENSGALG00000000883 6174 0.992 - - - - - - 0.992 - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
37. PRRC2B 1997 0.992 - - - - - - 0.992 - - - proline rich coiled-coil 2B, transcript variant X12
38. KIAA0922 4430 0.992 - - - - - - 0.992 - - - KIAA0922, transcript variant X4
39. RAP1GDS1 ENSGALG00000012222 10078 0.991 - - - - - - 0.991 - - - rap1 GTPase-GDP dissociation stimulator 1 [Source:NCBI gene;Acc:422701]
40. EEF1E1 ENSGALG00000012781 22615 0.991 - - - - - - 0.991 - - - eukaryotic translation elongation factor 1 epsilon 1
41. DNMT3B ENSGALG00000041461 12959 0.991 - - - - - - 0.991 - - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
42. GBX-1 GBX-1 1430 0.991 - - - - - - 0.991 - - -
43. AURKAIP1 ENSGALG00000001555 14715 0.99 - - - - - - 0.990 - - - aurora kinase A interacting protein 1 [Source:NCBI gene;Acc:419415]
44. ENSGALG00000021694 ENSGALG00000021694 26011 0.989 - - - - - - 0.989 - - -
45. DHX36 ENSGALG00000043082 17619 0.989 - - - - - - 0.989 - - - DEAH-box helicase 36 [Source:HGNC Symbol;Acc:HGNC:14410]
46. ATF4 ENSGALG00000012135 53361 0.987 - - - - - - 0.987 - - - activating transcription factor 4 [Source:NCBI gene;Acc:395693]
47. KIF2A ENSGALG00000014737 16391 0.985 - - - - - - 0.985 - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
48. UBE2C ENSGALG00000026380 27639 0.984 - - - - - - 0.984 - - - ubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]
49. CWC15 ENSGALG00000017207 30922 0.982 - - - - - - 0.982 - - - CWC15 spliceosome associated protein homolog [Source:NCBI gene;Acc:418996]
50. TRA2B ENSGALG00000006531 40566 0.982 - - - - - - 0.982 - - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
51. LOC770492 ENSGALG00000027778 695 0.979 - - - - - - - - - 0.979 ras-related and estrogen-regulated growth inhibitor-like
52. RPL39 ENSGALG00000008620 63315 0.976 - - - - - - 0.976 - - - ribosomal protein L39 [Source:NCBI gene;Acc:374132]
53. CASP8AP2 ENSGALG00000015611 5657 0.976 - - - - - - - - - 0.976 caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
54. MTX2 ENSGALG00000009264 17304 0.975 - - - - - - 0.975 - - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
55. DYNLRB1 ENSGALG00000034509 28361 0.973 - - - - - - 0.973 - - - dynein light chain roadblock-type 1
56. PSMA7 ENSGALG00000030411 42436 0.972 - - - - - - 0.972 - - - proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
57. B3GALTL B3GALTL 4128 0.972 - - - - - - - - - 0.972
58. WRNIP1 ENSGALG00000012856 1954 0.97 - - - - - - - - - 0.970 Werner helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
59. CBX3 ENSGALG00000011038 40977 0.967 - - - - - - 0.967 - - - chromobox 3 [Source:NCBI gene;Acc:395355]
60. SLC35B1 ENSGALG00000035057 10683 0.962 - - - - - - - - - 0.962 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
61. SPATA20 ENSGALG00000006857 3506 0.961 - - - - - - - - - 0.961 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
62. RHOT1 ENSGALG00000003397 5149 0.96 - - - - - - - - - 0.960 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
63. KIDINS220 ENSGALG00000016409 854 0.959 - - - - - - - - - 0.959 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
64. CCDC66 ENSGALG00000005450 1262 0.953 - - - - - - - - - 0.953 coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]
65. SSR2 ENSGALG00000000764 32190 0.953 - - - - - - - - - 0.953 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
66. KIAA1551 ENSGALG00000045168 3435 0.952 - - - - - - - - - 0.952 KIAA1551, transcript variant X1
67. F2RL2 ENSGALG00000023379 1049 0.948 - - - - - - - - - 0.948 coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]
68. MFSD1 ENSGALG00000009593 3116 0.948 - - - - - - - - - 0.948 major facilitator superfamily domain containing 1 [Source:NCBI gene;Acc:425017]
69. SUV39H2 ENSGALG00000013920 4360 0.947 - - - - - - - - - 0.947 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
70. MGA 1911 0.945 - - - - - - - - - 0.945 MGA, MAX dimerization protein, transcript variant X15
71. VWA9 ENSGALG00000007491 4790 0.942 - - - - - - - - - 0.942 von Willebrand factor A domain containing 9 [Source:NCBI gene;Acc:415540]
72. 5S_2 5S_2 58 0.936 - - - - - - - - - 0.936
73. ZNF6 ZNF6 138 0.936 - - - - - - - - - 0.936
74. TCF25 ENSGALG00000000129 7587 0.936 - - - - - - - - - 0.936 transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
75. HELLS ENSGALG00000005451 7094 0.935 - - - - - - - - - 0.935 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
76. CPNE2 ENSGALG00000001316 236 0.935 - - - - - - - - - 0.935 copine 2 [Source:NCBI gene;Acc:415646]
77. IL10R2 IL10R2 72 0.935 - - - - - - - - - 0.935
78. HSD17B12 ENSGALG00000036787 11748 0.935 - - - - - - - - - 0.935 hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
79. CXADR ENSGALG00000015701 96 0.934 - - - - - - - - - 0.934 coxsackie virus and adenovirus receptor, transcript variant X2
80. APBA3 ENSGALG00000000740 1249 0.934 - - - - - - - - - 0.934 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
81. FAM190B FAM190B 165 0.934 - - - - - - - - - 0.934
82. CASKIN1 604 0.934 - - - - - - - - - 0.934 CASK interacting protein 1, transcript variant X4
83. SSH1 ENSGALG00000004928 222 0.933 - - - - - - - - - 0.933 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
84. SOX6 ENSGALG00000006074 102 0.933 - - - - - - - - - 0.933 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
85. C1orf198 ENSGALG00000026600 5651 0.933 - - - - - - - - - 0.933 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
86. ITSN2 ENSGALG00000016504 651 0.932 - - - - - - - - - 0.932 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
87. MTSS1 ENSGALG00000041969 1312 0.932 - - - - - - - - - 0.932 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
88. CETN1 ENSGALG00000026741 7243 0.932 - - - - - - - - - 0.932 centrin 1 [Source:NCBI gene;Acc:422668]
89. CDH1-A CDH1-A 343 0.931 - - - - - - - - - 0.931
90. CCT8 ENSGALG00000015821 12161 0.931 - - - - - - - - - 0.931 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
91. ATP6V0C ENSGALG00000009229 125870 0.931 - - - - - - - - - 0.931 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
92. AURKA ENSGALG00000007768 793 0.93 - - - - - - - - - 0.930 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
93. PCLO 249 0.929 - - - - - - - - - 0.929 piccolo presynaptic cytomatrix protein
94. PLA2G15 ENSGALG00000041787 762 0.929 - - - - - - - - - 0.929 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
95. LAMP2 ENSGALG00000008572 198 0.929 - - - - - - - - - 0.929 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
96. PROM1 ENSGALG00000014496 2494 0.928 - - - - - - - - - 0.928 prominin 1 [Source:NCBI gene;Acc:422825]
97. ITGA9 ENSGALG00000029378 415 0.928 - - - - - - - - - 0.928 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
98. SGSH ENSGALG00000007027 1115 0.927 - - - - - - - - - 0.927 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
99. SLC2A3 SLC2A3 527 0.926 - - - - - - - - - 0.926
100. FAM129A ENSGALG00000004812 269 0.926 - - - - - - - - - 0.926 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]

There are 588 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA