Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for BRN3

Gene Name Gene ID Reads Annotation
BRN3 BRN3 52











Genes with expression patterns similar to BRN3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. BRN3 BRN3 52 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. PHF21B ENSGALG00000014218 10 1.533 - - - - - 0.808 - - - 0.725 PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
3. ENSGALG00000019267 ENSGALG00000019267 11 0.894 - - - - - - - 0.894 - -
4. TMEM255B ENSGALG00000035839 46 0.888 - - - - - - - 0.888 - - transmembrane protein 255B [Source:HGNC Symbol;Acc:HGNC:28297]
5. ENSGALG00000027373 ENSGALG00000027373 2129 0.884 - - - - - - - - - 0.884
6. LOC418298 ENSGALG00000014680 23 0.88 - - - - - - - 0.880 - - solute carrier family 25 member 33-like
7. AMN ENSGALG00000011391 143 0.877 - - - - - - - 0.877 - - amnion associated transmembrane protein [Source:NCBI gene;Acc:423472]
8. SPATA6 ENSGALG00000010502 16 0.86 - - - - - - 0.860 - - - spermatogenesis associated 6 [Source:HGNC Symbol;Acc:HGNC:18309]
9. CELA2A ENSGALG00000004568 10 0.86 - - - - - - 0.860 - - - chymotrypsin like elastase family member 2A [Source:NCBI gene;Acc:419486]
10. CXorf36 ENSGALG00000016215 108 0.846 - - - - - 0.846 - - - - chromosome X open reading frame 36 [Source:HGNC Symbol;Acc:HGNC:25866]
11. NRSN2 ENSGALG00000045961 2 0.846 - - - - - 0.846 - - - - neurensin 2 [Source:HGNC Symbol;Acc:HGNC:16229]
12. TLDC2 ENSGALG00000029033 6 0.84 - - - - - - 0.840 - - - TBC/LysM-associated domain containing 2, transcript variant X2
13. C1QTNF2 ENSGALG00000027232 42 0.839 - - - - - 0.839 - - - - C1q and tumor necrosis factor related protein 2 [Source:NCBI gene;Acc:416156]
14. DYNC1LI2 ENSGALG00000005241 25 0.836 - - - - - 0.836 - - - - dynein cytoplasmic 1 light intermediate chain 2 [Source:NCBI gene;Acc:415793]
15. MYL1 ENSGALG00000002907 1300 0.83 - - - - - - - 0.830 - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
16. C5NT1AL ENSGALG00000006608 277 0.827 - - - - - 0.827 - - - - cytosolic 5'-nucleotidase 1A-like, transcript variant X2
17. RYR2 ENSGALG00000010812 95 0.826 - - - - - - - 0.826 - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
18. ENSGALG00000003619 ENSGALG00000003619 58 0.826 - - - - - - - 0.826 - -
19. KIAA0195 KIAA0195 48 0.826 - - - - - - - 0.826 - -
20. ZBTB33 ENSGALG00000008611 15 0.826 - - - - - - - 0.826 - - zinc finger and BTB domain containing 33 [Source:HGNC Symbol;Acc:HGNC:16682]
21. CNOT6L ENSGALG00000010333 13 0.826 - - - - - - - 0.826 - - CCR4-NOT transcription complex subunit 6 like [Source:HGNC Symbol;Acc:HGNC:18042]
22. PRDM12 ENSGALG00000003895 35 0.825 - - - - - - - - - 0.825 PR/SET domain 12 [Source:HGNC Symbol;Acc:HGNC:13997]
23. NANOG ENSGALG00000027772 89 0.822 - - - - - - - 0.822 - - Nanog homeobox [Source:NCBI gene;Acc:100272166]
24. VWA8 ENSGALG00000016955 34 0.822 - - - - - - - 0.822 - - von Willebrand factor A domain containing 8 [Source:HGNC Symbol;Acc:HGNC:29071]
25. TFCP2L1 ENSGALG00000011635 4 0.822 - - - - - - - 0.822 - - transcription factor CP2 like 1 [Source:HGNC Symbol;Acc:HGNC:17925]
26. DEPTOR ENSGALG00000005790 6 0.822 - - - - - - - 0.822 - - DEP domain containing MTOR-interacting protein
27. ZDHHC8 ENSGALG00000002124 35 0.822 - - - - - - - 0.822 - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
28. VGLL3 ENSGALG00000015497 39 0.822 - - - - - - - 0.822 - - vestigial like family member 3 [Source:HGNC Symbol;Acc:HGNC:24327]
29. YAP1 ENSGALG00000038154 24 0.822 - - - - - - - 0.822 - - Yes associated protein 1 [Source:NCBI gene;Acc:396171]
30. VEGFRKDRL ENSGALG00000007646 18 0.822 - - - - - - - 0.822 - - vascular endothelial growth factor receptor kdr-like, transcript variant X2
31. ERC2 ENSGALG00000005419 24 0.822 - - - - - - - 0.822 - - ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]
32. KHDRBS3 ENSGALG00000031519 501 0.822 - - - - - - - 0.822 - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
33. gga-mir-1458 ENSGALG00000030959 41 0.822 - - - - - - - 0.822 - - gga-mir-1458 [Source:miRBase;Acc:MI0007063]
34. RERGL ENSGALG00000013112 16 0.822 - - - - - - - 0.822 - - RERG like [Source:HGNC Symbol;Acc:HGNC:26213]
35. DOCK2 ENSGALG00000002080 13 0.822 - - - - - - - 0.822 - - dedicator of cytokinesis 2 [Source:HGNC Symbol;Acc:HGNC:2988]
36. SOHO-1 ENSGALG00000015599 110 0.821 - - - - - - - - - 0.821 sensory organ homeobox protein SOHo [Source:NCBI gene;Acc:396346]
37. LSS ENSGALG00000006198 318 0.82 - - - - - 0.820 - - - - lanosterol synthase [Source:NCBI gene;Acc:424037]
38. AKAP14 26 0.819 - - - - - - - 0.819 - - A-kinase anchoring protein 14, transcript variant X1
39. LPHN3 LPHN3 41 0.819 - - - - - - - 0.819 - -
40. ENSGALG00000015966 ENSGALG00000015966 4 0.819 - - - - - - - 0.819 - -
41. NCEH1 ENSGALG00000009170 8 0.808 - - - - - 0.808 - - - - neutral cholesterol ester hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:29260]
42. ENSGALG00000015324 ENSGALG00000015324 10 0.808 - - - - - 0.808 - - - -
43. SOWAHB 1 0.808 - - - - - 0.808 - - - - sosondowah ankyrin repeat domain family member B
44. DFNB59 ENSGALG00000023439 4 0.808 - - - - - 0.808 - - - - deafness, autosomal recessive 59, transcript variant X1
45. GIPR 1 0.808 - - - - - 0.808 - - - - gastric inhibitory polypeptide receptor
46. SS1R SS1R 3 0.808 - - - - - 0.808 - - - -
47. LPGAT1 ENSGALG00000009848 33 0.808 - - - - - 0.808 - - - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
48. TMC6 ENSGALG00000038875 6 0.808 - - - - - 0.808 - - - - transmembrane channel like 6 [Source:HGNC Symbol;Acc:HGNC:18021]
49. KLF15 ENSGALG00000036133 3 0.808 - - - - - 0.808 - - - - Kruppel like factor 15 [Source:HGNC Symbol;Acc:HGNC:14536]
50. NEK9 ENSGALG00000010314 6 0.808 - - - - - 0.808 - - - - NIMA related kinase 9 [Source:HGNC Symbol;Acc:HGNC:18591]
51. YIPF7 ENSGALG00000014221 5 0.808 - - - - - 0.808 - - - - Yip1 domain family member 7 [Source:NCBI gene;Acc:422774]
52. OVST ENSGALG00000011930 2 0.808 - - - - - 0.808 - - - - ovostatin [Source:NCBI gene;Acc:396151]
53. DAPK2 ENSGALG00000003336 3 0.808 - - - - - 0.808 - - - - death associated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:2675]
54. LOC416622 ENSGALG00000007030 30 0.808 - - - - - 0.808 - - - - transmembrane protein 180-like, transcript variant X8
55. GRAMD2 GRAMD2 3 0.808 - - - - - 0.808 - - - -
56. SH3BP5 ENSGALG00000039337 17 0.808 - - - - - 0.808 - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
57. PAX-6 PAX-6 2650 0.808 - - - - - - - - - 0.808
58. ABCG5 ENSGALG00000009955 4 0.808 - - - - - 0.808 - - - - ATP binding cassette subfamily G member 5 [Source:HGNC Symbol;Acc:HGNC:13886]
59. ZHX1 ENSGALG00000034999 21 0.808 - - - - - 0.808 - - - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
60. ENSGALG00000006114 ENSGALG00000006114 1 0.808 - - - - - 0.808 - - - -
61. MYL2 ENSGALG00000004582 2245 0.808 - - - - - 0.808 - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
62. CDK19 ENSGALG00000015051 26 0.808 - - - - - 0.808 - - - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
63. AOC1 13 0.808 - - - - - 0.808 - - - - amine oxidase, copper containing 1, transcript variant X2
64. PLEKHH1 ENSGALG00000009507 18 0.808 - - - - - 0.808 - - - - pleckstrin homology, MyTH4 and FERM domain containing H1 [Source:HGNC Symbol;Acc:HGNC:17733]
65. C18H17ORF67 ENSGALG00000024428 10 0.808 - - - - - 0.808 - - - - chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
66. ZNF362 ENSGALG00000026558 11 0.804 - - - - - - - 0.804 - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
67. SPINK4 ENSGALG00000043964 50 0.804 - - - - - 0.804 - - - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
68. GPR143 ENSGALG00000016615 14 0.801 - - - - - 0.801 - - - - G protein-coupled receptor 143 [Source:NCBI gene;Acc:418652]
69. CLSTN2 ENSGALG00000037387 23 0.799 - - - - - 0.799 - - - - calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]
70. HES6 ENSGALG00000028415 4830 0.795 - - - - - - - - - 0.795 hes family bHLH transcription factor 6
71. NIT2 ENSGALG00000015275 278 0.794 - - - - - 0.794 - - - - nitrilase family member 2 [Source:HGNC Symbol;Acc:HGNC:29878]
72. ADPRH ENSGALG00000015473 7 0.793 - - - - - 0.793 - - - - ADP-ribosylarginine hydrolase [Source:NCBI gene;Acc:418452]
73. PROK1 ENSGALG00000040082 34 0.791 - - - - - - 0.791 - - - prokineticin 1 [Source:HGNC Symbol;Acc:HGNC:18454]
74. P2RY4 ENSGALG00000004346 11 0.79 - - - - - - 0.790 - - - pyrimidinergic receptor P2Y4 [Source:HGNC Symbol;Acc:HGNC:8542]
75. ENSGALG00000021386 ENSGALG00000021386 29 0.789 - - - - - 0.789 - - - -
76. LIN7A ENSGALG00000010939 8 0.786 - - - - - - - 0.786 - - lin-7 homolog A, crumbs cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:17787]
77. PIRT 41 0.785 - - - - - - - - - 0.785 phosphoinositide-interacting regulator of transient receptor potential channels
78. PTH ENSGALG00000042878 40 0.78 - - - - - - - - - 0.780 parathyroid hormone [Source:NCBI gene;Acc:396436]
79. AQP3 ENSGALG00000002452 97 0.78 - - - - - 0.780 - - - - aquaporin 3 (Gill blood group) [Source:HGNC Symbol;Acc:HGNC:636]
80. IL22RA1 ENSGALG00000004221 71 0.778 - - - - - 0.778 - - - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
81. LPAR6 ENSGALG00000016998 36 0.777 - - - - - 0.777 - - - - lysophosphatidic acid receptor 6 [Source:NCBI gene;Acc:396118]
82. DBX2 ENSGALG00000009604 367 0.775 - - - - - - - - - 0.775 developing brain homeobox 2 [Source:NCBI gene;Acc:417801]
83. GTPBP8 ENSGALG00000015190 21 0.773 - - - 0.773 - - - - - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
84. gga-mir-6642 ENSGALG00000028521 370 0.772 - - - - - 0.772 - - - - gga-mir-6642 [Source:miRBase;Acc:MI0022461]
85. CRABP-I ENSGALG00000003193 67258 0.771 - - - - - - - - - 0.771 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
86. DTX4 ENSGALG00000010835 25 0.769 - - - - - - - - - 0.769 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
87. C2CD3 ENSGALG00000017314 13 0.765 - - - - - - - 0.765 - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
88. TBX2 ENSGALG00000034297 57 0.763 - - - - - 0.763 - - - - T-box 2 [Source:HGNC Symbol;Acc:HGNC:11597]
89. ENSGALG00000027002 ENSGALG00000027002 7570 0.76 - - - - - - - - - 0.760
90. TEX2 ENSGALG00000003496 23 0.76 - - - - - - - 0.760 - - testis expressed 2 [Source:HGNC Symbol;Acc:HGNC:30884]
91. VWC2 ENSGALG00000013081 492 0.758 - - - - - 0.758 - - - - von Willebrand factor C domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30200]
92. INADL INADL 51 0.749 - - - - - 0.749 - - - -
93. C1QTNF9 ENSGALG00000017117 7 0.749 - - - - - - - 0.749 - - C1q and tumor necrosis factor related protein 9, transcript variant X2
94. CCLI10 CCLI10 239 0.749 - - - - - 0.749 - - - -
95. NFKB2 ENSGALG00000005653 39 0.747 - - - - - - 0.747 - - - nuclear factor kappa B subunit 2 [Source:NCBI gene;Acc:386574]
96. IL-12B IL-12B 14 0.747 - - - - - 0.747 - - - -
97. SNORD79 SNORD79 12 0.747 - - - - - 0.747 - - - -
98. TMTC1 ENSGALG00000012956 160 0.747 - - - - - - - 0.747 - - transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
99. STK32A ENSGALG00000029195 27 0.746 - - - - - 0.746 - - - - serine/threonine kinase 32A [Source:NCBI gene;Acc:416351]
100. HS3ST5 ENSGALG00000026594 44 0.745 - - - - - - - - - 0.745 heparan sulfate-glucosamine 3-sulfotransferase 5 [Source:HGNC Symbol;Acc:HGNC:19419]

There are 24 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA