Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for BRIP1

Gene Name Gene ID Reads Annotation
BRIP1 ENSGALG00000005279 114 BRCA1 interacting protein C-terminal helicase 1 [Source:NCBI gene;Acc:417642]











Genes with expression patterns similar to BRIP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. BRIP1 ENSGALG00000005279 114 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 BRCA1 interacting protein C-terminal helicase 1 [Source:NCBI gene;Acc:417642]
2. GLB1 ENSGALG00000040028 207 1.479 - - - - - - 0.749 0.730 - - galactosidase beta 1 [Source:NCBI gene;Acc:420720]
3. K123 ENSGALG00000041978 16 0.947 - - - - - - - 0.947 - - K123 protein [Source:NCBI gene;Acc:395873]
4. IMPG2 ENSGALG00000015322 74 0.91 - - - - - - 0.910 - - - interphotoreceptor matrix proteoglycan 2 [Source:NCBI gene;Acc:418393]
5. ALDH6A1 ENSGALG00000010211 29 0.909 - - - - - - 0.909 - - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
6. KCNMB2 ENSGALG00000031929 97 0.897 - - - - - - - 0.897 - - potassium calcium-activated channel subfamily M regulatory beta subunit 2, transcript variant X4
7. WFDC2 ENSGALG00000031164 37 0.895 - - - - - - 0.895 - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
8. ANTXR2 ENSGALG00000043675 52 0.893 - - - - - - 0.893 - - - ANTXR cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:21732]
9. SYNJ2 ENSGALG00000013727 17 0.893 - - - - - - 0.893 - - - synaptojanin 2 [Source:HGNC Symbol;Acc:HGNC:11504]
10. SRGAP2 ENSGALG00000000816 97 0.893 - - - - - - 0.893 - - - SLIT-ROBO Rho GTPase activating protein 2, transcript variant X11
11. C1QTNF2 ENSGALG00000027232 42 0.893 - - - - - - - 0.893 - - C1q and tumor necrosis factor related protein 2 [Source:NCBI gene;Acc:416156]
12. ZDHHC8 ENSGALG00000002124 35 0.893 - - - - - - 0.893 - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
13. HINFP ENSGALG00000006806 15 0.893 - - - - - - 0.893 - - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
14. GALNT14 ENSGALG00000009078 126 0.89 - - - - - - 0.890 - - - polypeptide N-acetylgalactosaminyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:22946]
15. PPARG ENSGALG00000004974 62 0.888 - - - - - - - 0.888 - - peroxisome proliferator-activated receptor gamma [Source:NCBI gene;Acc:373928]
16. ENSGALG00000026142 ENSGALG00000026142 85 0.885 - - - - - - 0.885 - - -
17. ST6GAL2 ENSGALG00000016803 24 0.881 - - - - - - 0.881 - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
18. EEA1 ENSGALG00000011280 923 0.879 - - - - - - 0.879 - - - early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
19. PPM1F ENSGALG00000039121 26 0.875 - - - - - - 0.875 - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
20. PEX7 ENSGALG00000013874 34 0.875 - - - - - - 0.875 - - - peroxisomal biogenesis factor 7 [Source:NCBI gene;Acc:421687]
21. CCDC175 17 0.871 - - - - - - 0.871 - - - coiled-coil domain containing 175
22. KCTD8 ENSGALG00000014225 47 0.869 - - - - - - 0.869 - - - potassium channel tetramerization domain containing 8 [Source:HGNC Symbol;Acc:HGNC:22394]
23. ZDHHC22 ENSGALG00000023099 10 0.869 - - - - - - 0.869 - - - zinc finger DHHC-type containing 22 [Source:HGNC Symbol;Acc:HGNC:20106]
24. TGFBRAP1 ENSGALG00000016795 81 0.869 - - - - - - 0.869 - - - transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
25. OSBPL10 45 0.869 - - - - - - 0.869 - - - oxysterol binding protein like 10
26. TRERF1 ENSGALG00000009896 42 0.867 - - - - - - 0.867 - - - transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
27. KIAA1841 ENSGALG00000007825 22 0.864 - - - - - - 0.864 - - - KIAA1841 [Source:NCBI gene;Acc:421196]
28. ALOX5AP ENSGALG00000026781 28 0.863 - - - - - - 0.863 - - - arachidonate 5-lipoxygenase activating protein [Source:NCBI gene;Acc:770904]
29. CHD5 ENSGALG00000000747 365 0.863 - - - - - - 0.863 - - - chromodomain helicase DNA binding protein 5, transcript variant X17
30. TMEM200A ENSGALG00000002282 77 0.863 - - - - - - 0.863 - - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
31. HACL1 ENSGALG00000011211 51 0.862 - - - - - - 0.862 - - - 2-hydroxyacyl-CoA lyase 1 [Source:NCBI gene;Acc:420638]
32. FGL1 ENSGALG00000013606 42 0.861 - - - - - - 0.861 - - - fibrinogen like 1 [Source:NCBI gene;Acc:422728]
33. SACM1L ENSGALG00000040902 70 0.857 - - - - - - 0.857 - - - SAC1 like phosphatidylinositide phosphatase [Source:HGNC Symbol;Acc:HGNC:17059]
34. MT1 MT1 218 0.857 - - - - - - 0.857 - - -
35. RPRD2 ENSGALG00000014656 939 0.855 - - - - - - 0.855 - - - regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
36. IGF1R ENSGALG00000040651 772 0.853 - - - - - - 0.853 - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
37. CDX2 ENSGALG00000034983 34 0.852 - - - - - - 0.852 - - - caudal type homeobox 2 [Source:NCBI gene;Acc:374205]
38. KLHL17 ENSGALG00000002199 754 0.849 - - - - - - 0.849 - - - kelch like family member 17 [Source:HGNC Symbol;Acc:HGNC:24023]
39. ATP2B2 ENSGALG00000030908 584 0.847 - - - - - - 0.847 - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
40. ENSGALG00000027412 ENSGALG00000027412 202 0.846 - - - - - - 0.846 - - -
41. PLB1 PLB1 101 0.845 - - - - - - 0.845 - - -
42. F10 ENSGALG00000026677 227 0.843 - - - - - - 0.843 - - - coagulation factor X [Source:NCBI gene;Acc:395876]
43. CCDC41 CCDC41 160 0.843 - - - - - - 0.843 - - -
44. PFN2 313 0.841 - - - - - - 0.841 - - - profilin 2, transcript variant X2
45. TMEM178B ENSGALG00000028444 31 0.837 - - - - - - 0.837 - - - transmembrane protein 178B [Source:NCBI gene;Acc:418120]
46. ASIC2 ENSGALG00000000367 72 0.836 - - - - - - 0.836 - - - acid sensing ion channel subunit 2, transcript variant X2
47. SUZ12 ENSGALG00000003277 177 0.833 - - - - - - 0.833 - - - SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
48. CCNO ENSGALG00000028595 68 0.829 - - - - - - 0.829 - - - cyclin O [Source:HGNC Symbol;Acc:HGNC:18576]
49. FBLIM1 ENSGALG00000003636 1498 0.829 - - - - - - - 0.829 - - filamin binding LIM protein 1 [Source:HGNC Symbol;Acc:HGNC:24686]
50. SLC39A10 ENSGALG00000007777 272 0.826 - - - - - - - 0.826 - - solute carrier family 39 member 10 [Source:HGNC Symbol;Acc:HGNC:20861]
51. BMPR-II BMPR-II 33 0.825 - - - - - - 0.825 - - -
52. ARID3A ENSGALG00000026231 867 0.821 - - - - - - 0.821 - - - AT-rich interaction domain 3A [Source:HGNC Symbol;Acc:HGNC:3031]
53. ENSGALG00000016441 ENSGALG00000016441 264 0.818 - - - - - - 0.818 - - -
54. GCLC ENSGALG00000016313 54 0.818 - - - - - - 0.818 - - - glutamate-cysteine ligase catalytic subunit [Source:HGNC Symbol;Acc:HGNC:4311]
55. ENSGALG00000012674 ENSGALG00000012674 109 0.817 - - 0.817 - - - - - - -
56. DRC1 ENSGALG00000016591 174 0.809 - - - - - - 0.809 - - - dynein regulatory complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24245]
57. LY86 ENSGALG00000012801 865 0.803 - - - - - - 0.803 - - - lymphocyte antigen 86 [Source:NCBI gene;Acc:420872]
58. DUSP21 ENSGALG00000007765 171 0.802 - - - - - - 0.802 - - - dual specificity phosphatase 21 [Source:HGNC Symbol;Acc:HGNC:20476]
59. PVRL3 PVRL3 231 0.8 - - - - - - 0.800 - - -
60. CSTA ENSGALG00000014412 422 0.8 - - - - - - 0.800 - - - cystatin A [Source:HGNC Symbol;Acc:HGNC:2481]
61. B3GAT2 ENSGALG00000031590 615 0.798 - - - - - - 0.798 - - - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
62. FAM134C 860 0.797 - - - - - - 0.797 - - - family with sequence similarity 134 member C
63. MAP3K8 ENSGALG00000007356 188 0.793 - - - - - - 0.793 - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
64. DNAJB4 ENSGALG00000008916 68 0.788 - - - - - - 0.788 - - - DnaJ heat shock protein family (Hsp40) member B4 [Source:HGNC Symbol;Acc:HGNC:14886]
65. PCSK2 ENSGALG00000008734 633 0.787 - - - - - - - 0.787 - - proprotein convertase subtilisin/kexin type 2 [Source:HGNC Symbol;Acc:HGNC:8744]
66. MRPS5 ENSGALG00000008550 1707 0.786 - - - - - - 0.786 - - - mitochondrial ribosomal protein S5 [Source:NCBI gene;Acc:416706]
67. RLF ENSGALG00000000862 586 0.786 - - - - - - 0.786 - - - rearranged L-myc fusion [Source:HGNC Symbol;Acc:HGNC:10025]
68. LPCAT1 ENSGALG00000013189 197 0.786 - - - - - - 0.786 - - - lysophosphatidylcholine acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:25718]
69. MFSD10 ENSGALG00000015652 211 0.784 - - - - - - 0.784 - - - major facilitator superfamily domain containing 10, transcript variant X4
70. PHYHD1 ENSGALG00000042266 90 0.783 - - - - - - 0.783 - - - phytanoyl-CoA dioxygenase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23396]
71. BATF ENSGALG00000010323 96 0.783 - - - - - - 0.783 - - - basic leucine zipper ATF-like transcription factor [Source:HGNC Symbol;Acc:HGNC:958]
72. IGF2 ENSGALG00000035282 513 0.782 - - - - - - 0.782 - - - insulin like growth factor 2 [Source:NCBI gene;Acc:395097]
73. LOC395991 ENSGALG00000006944 103 0.78 - - - - - - 0.780 - - - crescent, transcript variant X1
74. IFIH1 ENSGALG00000041192 78 0.777 - - - - - - 0.777 - - - interferon induced with helicase C domain 1 [Source:NCBI gene;Acc:424185]
75. PPM1M ENSGALG00000033277 556 0.777 - - - - - - 0.777 - - - protein phosphatase, Mg2+/Mn2+ dependent 1M [Source:NCBI gene;Acc:415941]
76. NEURL NEURL 221 0.777 - - - - - - 0.777 - - -
77. SPRED2 ENSGALG00000008778 1475 0.776 - - - - - - 0.776 - - - sprouty related EVH1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:17722]
78. PRRG3 ENSGALG00000027977 1295 0.775 - - - - - - 0.775 - - - proline rich and Gla domain 3 [Source:HGNC Symbol;Acc:HGNC:30798]
79. CTSZ ENSGALG00000007462 630 0.771 - - - - - - 0.771 - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
80. MACC1 ENSGALG00000010868 270 0.769 - - - - - - 0.769 - - - MACC1, MET transcriptional regulator [Source:HGNC Symbol;Acc:HGNC:30215]
81. C16orf62 C16orf62 316 0.766 - - - - - 0.766 - - - -
82. KIAA0040 ENSGALG00000030543 53 0.766 - - - - - - - 0.766 - - KIAA0040 [Source:HGNC Symbol;Acc:HGNC:28950]
83. BAIAP2L1 ENSGALG00000003548 324 0.765 - - - - - - 0.765 - - - BAI1 associated protein 2 like 1 [Source:NCBI gene;Acc:416437]
84. SYT11 ENSGALG00000014646 1454 0.761 - - 0.761 - - - - - - - synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
85. CRABP2 ENSGALG00000029140 559 0.761 - - - - - - 0.761 - - - cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]
86. MAFB ENSGALG00000003670 834 0.761 - - - - - - - 0.761 - - MAF bZIP transcription factor B [Source:NCBI gene;Acc:419173]
87. GREB1L ENSGALG00000014935 88 0.755 - - - - - - 0.755 - - - GREB1 like retinoic acid receptor coactivator [Source:HGNC Symbol;Acc:HGNC:31042]
88. PFKFB4 ENSGALG00000002099, ENSGALG00000032385 30 0.751 - - - - - - - 0.751 - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:HGNC Symbol;Acc:HGNC:8875]
89. NUDT19 ENSGALG00000029498 90 0.749 - - - - - - 0.749 - - - nudix hydrolase 19 [Source:NCBI gene;Acc:427548]
90. LDLRAD1 ENSGALG00000020647 128 0.749 - - - - - - 0.749 - - - low density lipoprotein receptor class A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:32069]
91. ZCRB1 ENSGALG00000009544 1520 0.747 - - - - - - 0.747 - - - zinc finger CCHC-type and RNA binding motif containing 1 [Source:NCBI gene;Acc:417791]
92. TDRD1 ENSGALG00000046180 612 0.747 - - - - - - 0.747 - - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
93. RERG ENSGALG00000028186 1124 0.745 - - - - - - 0.745 - - - RAS like estrogen regulated growth inhibitor [Source:HGNC Symbol;Acc:HGNC:15980]
94. LOC100858777 ENSGALG00000027624 58 0.744 - - - - - - 0.744 - - - rhodopsin, GQ-coupled-like
95. TRMT61B ENSGALG00000008979 615 0.739 - - - - - - 0.739 - - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
96. RBM24 ENSGALG00000012712 4138 0.738 - - - - - - - 0.738 - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
97. MAOA ENSGALG00000016224 588 0.737 - - - - - - - 0.737 - - monoamine oxidase A [Source:NCBI gene;Acc:418563]
98. ZNF770 ENSGALG00000009817 27 0.736 - - - - - - - 0.736 - - zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
99. TMC1 ENSGALG00000015145 1180 0.734 - - - - - - - 0.734 - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
100. GNPDA1 ENSGALG00000040594 13 0.734 - - - - - - - 0.734 - - glucosamine-6-phosphate deaminase 1 [Source:NCBI gene;Acc:416341]

There are 59 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA