Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for BRF1

Gene Name Gene ID Reads Annotation
BRF1 ENSGALG00000011705 3406 BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]











Genes with expression patterns similar to BRF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. BRF1 ENSGALG00000011705 3406 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
2. COQ5 ENSGALG00000007185 5614 1.951 - - - - 0.990 - - 0.961 - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
3. ASAP2 ENSGALG00000016419 1393 1.949 - - - - 0.995 - - 0.954 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
4. RBM34 ENSGALG00000029915 5618 1.948 - - - - 0.993 - - 0.955 - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
5. SYNE1 ENSGALG00000013505 2324 1.878 - - 0.883 - 0.995 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
6. RALGDS ENSGALG00000003412 4478 1.867 - - 0.876 - 0.991 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
7. SNX14 ENSGALG00000015831 2554 1.828 - - 0.834 - 0.994 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
8. ZC3H11A ENSGALG00000000541 2712 1.811 - - 0.844 - - - - 0.967 - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
9. SZT2 ENSGALG00000028561 255 1.8 - - 0.844 - - - - 0.956 - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
10. WDR92 ENSGALG00000008760 3934 1.797 - - 0.808 - 0.989 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
11. LRRC42 ENSGALG00000010743 384 1.796 - - 0.835 - - - - 0.961 - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
12. CHGA ENSGALG00000010820 1028 1.786 - - 0.826 - - - - 0.960 - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
13. WBP4 ENSGALG00000016949 5858 1.784 - - 0.806 - - - - 0.978 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
14. STARD3NL ENSGALG00000033038 4851 1.763 - - 0.772 - 0.991 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
15. SEPHS1 ENSGALG00000014575 10701 1.761 - - 0.815 - 0.946 - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
16. TIMMDC1 ENSGALG00000024480 9337 1.739 - - 0.751 - 0.988 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
17. PITHD1 ENSGALG00000003986 11470 1.727 - - - - 0.995 - 0.732 - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
18. DIABLO ENSGALG00000004412 9499 1.721 - - 0.780 - - - - 0.941 - - diablo IAP-binding mitochondrial protein, transcript variant X3
19. NEK6 ENSGALG00000001118 20333 1.714 - - - - 0.970 - 0.744 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
20. CCNI ENSGALG00000011457 3203 1.705 - - 0.738 - - - - 0.967 - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
21. ATP6V1E1 ENSGALG00000013036 13497 1.697 - - 0.863 - - - - 0.834 - - ATPase H+ transporting V1 subunit E1 [Source:NCBI gene;Acc:418162]
22. ST14 ENSGALG00000001331 1655 1.683 - - 0.723 - - - - 0.960 - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
23. LGALS1 ENSGALG00000012420 13993 1.678 - - 0.708 - 0.970 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
24. HOXA7 ENSGALG00000026989 6746 1.658 - - 0.806 - - - - 0.852 - - homeobox A7 [Source:NCBI gene;Acc:395290]
25. USMG5 ENSGALG00000034645 33263 1.618 - - 0.722 - 0.896 - - - - - up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
26. ELOVL5 ENSGALG00000016314 18163 1.58 - - 0.766 - 0.814 - - - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
27. LOC776067 ENSGALG00000016808 9164 1.565 - - - - - - 0.702 0.863 - - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
28. LGR4 ENSGALG00000040834 5529 1.525 - - 0.796 - - - 0.729 - - - leucine rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:13299]
29. MIB1 ENSGALG00000014974 3583 1.518 - - 0.807 - - - 0.711 - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
30. ACTR8 ENSGALG00000005385 3647 1.516 - - 0.786 - - - 0.730 - - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
31. WSB2 ENSGALG00000008151 13246 1.501 - - 0.780 - - - 0.721 - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
32. LXR LXR 2599 1.491 - - 0.758 - - - 0.733 - - -
33. HCCS ENSGALG00000005571 4939 1.485 - - 0.774 - - - 0.711 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
34. ASH2L ENSGALG00000003233 4814 1.416 - - 0.707 - - - 0.709 - - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
35. RAMP3 ENSGALG00000037246 1187 0.999 - - - - 0.999 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
36. PREP2 PREP2 238 0.999 - - - - 0.999 - - - - -
37. SMG7 ENSGALG00000004667 707 0.998 - - - - 0.998 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
38. PRDM4 ENSGALG00000012619 876 0.998 - - - - 0.998 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
39. SDCBP ENSGALG00000015436 1228 0.998 - - - - 0.998 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
40. MED8 ENSGALG00000009993 3095 0.998 - - - - 0.998 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
41. ANKRD9 ENSGALG00000011376 525 0.998 - - - - 0.998 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
42. PTK2B ENSGALG00000016564 406 0.998 - - - - 0.998 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
43. RBM6 ENSGALG00000035578 1690 0.997 - - - - 0.997 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
44. GTF2H1 ENSGALG00000042340 1553 0.997 - - - - 0.997 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
45. LZIC ENSGALG00000002616 9052 0.996 - - - - 0.996 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
46. YARS ENSGALG00000003563 11093 0.996 - - - - 0.996 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
47. NDUFV1 ENSGALG00000042809 6222 0.996 - - - - 0.996 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
48. SAP30 ENSGALG00000036252 2032 0.995 - - - - 0.995 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
49. PHTF1 ENSGALG00000001845 3276 0.995 - - - - 0.995 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
50. BAHD1 ENSGALG00000033675 1779 0.995 - - - - 0.995 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
51. IARS2 ENSGALG00000009566 4599 0.994 - - - - 0.994 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
52. TMF1 ENSGALG00000013408 3344 0.994 - - - - 0.994 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
53. ENSGALG00000006569 ENSGALG00000006569 2169 0.994 - - - - 0.994 - - - - -
54. ETS1 ENSGALG00000001143 7284 0.994 - - - - 0.994 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
55. RAD54B ENSGALG00000043597 1699 0.993 - - - - 0.993 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
56. MRPL16 ENSGALG00000029419 8033 0.993 - - - - 0.993 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
57. HSF2 ENSGALG00000038420 5259 0.991 - - - - 0.991 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
58. C9orf85 ENSGALG00000026001 4110 0.991 - - - - 0.991 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
59. KIF11 ENSGALG00000030597 5528 0.991 - - - - 0.991 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
60. DGKZ ENSGALG00000008380 5389 0.991 - - - - 0.991 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
61. FNDC5 ENSGALG00000003567 3328 0.991 - - - - 0.991 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
62. EDNRA ENSGALG00000010013 2472 0.99 - - - - 0.990 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
63. MED21 ENSGALG00000027435 5766 0.99 - - - - 0.990 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
64. LMAN2 ENSGALG00000033232 11740 0.989 - - - - 0.989 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
65. TSPO2 ENSGALG00000003212 5141 0.989 - - - - 0.989 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
66. CDKN1B ENSGALG00000022980 4606 0.989 - - - - 0.989 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
67. DLL1 ENSGALG00000011182 1613 0.988 - - - - 0.988 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
68. LOC426385 ENSGALG00000026301 2703 0.987 - - - - 0.987 - - - - - serine/threonine kinase 35-like, transcript variant X2
69. MEF2BNB MEF2BNB 5578 0.986 - - - - 0.986 - - - - -
70. ENSGALG00000027854 ENSGALG00000027854 5007 0.986 - - - - 0.986 - - - - -
71. MARC1 ENSGALG00000009453 5675 0.986 - - - - 0.986 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
72. PBRM1 ENSGALG00000037455 6450 0.985 - - - - 0.985 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
73. SFXN5 ENSGALG00000016094 2678 0.984 - - - - 0.984 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
74. UTP6 ENSGALG00000003260 4909 0.984 - - - - 0.984 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
75. PSMG3 ENSGALG00000004203 11240 0.983 - - - - 0.983 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
76. THAP4 ENSGALG00000006283 1707 0.983 - - - - - - - 0.983 - - THAP domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23187]
77. WNK2 ENSGALG00000038850 4712 0.982 - - - - 0.982 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
78. CDH3 5050 0.982 - - - - 0.982 - - - - - cadherin 3
79. MED20 ENSGALG00000003474 4583 0.982 - - - - - - - 0.982 - - mediator complex subunit 20 [Source:NCBI gene;Acc:419926]
80. MYBL2 ENSGALG00000003503 15875 0.98 - - - - 0.980 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
81. CCDC132 CCDC132 2632 0.98 - - - - 0.980 - - - - -
82. SIAH2 ENSGALG00000010395 2126 0.98 - - - - - - - 0.980 - - siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
83. HARS ENSGALG00000035080 11602 0.98 - - - - 0.980 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
84. RHOT1 ENSGALG00000003397 5149 0.98 - - - - 0.980 - - - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
85. FUNDC2 ENSGALG00000029585 9334 0.98 - - - - 0.980 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
86. LGMN ENSGALG00000010811 7401 0.979 - - - - 0.979 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
87. SLC37A4 ENSGALG00000007716 2263 0.979 - - - - - - - 0.979 - - solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]
88. KIF3B ENSGALG00000006604 2968 0.978 - - - - - - - 0.978 - - kinesin family member 3B [Source:NCBI gene;Acc:419284]
89. UPF3B ENSGALG00000008618 12350 0.978 - - - - 0.978 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
90. HABP4 ENSGALG00000012628 2894 0.977 - - - - - - - 0.977 - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
91. DLD ENSGALG00000007931 11011 0.977 - - - - 0.977 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
92. ECHDC3 ENSGALG00000006690 1299 0.976 - - - - - - - 0.976 - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
93. CDCA7 ENSGALG00000040833 7484 0.976 - - - - 0.976 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
94. TRAPPC12 ENSGALG00000016387 2593 0.976 - - - - - - - 0.976 - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
95. SH3BGR ENSGALG00000016127 2561 0.976 - - - - 0.976 - - - - - SH3 domain binding glutamate rich protein
96. GPR155 ENSGALG00000014209 1281 0.976 - - - - - - - 0.976 - - G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
97. SURF2 ENSGALG00000003181 3500 0.975 - - - - - - - 0.975 - - surfeit 2 [Source:NCBI gene;Acc:417156]
98. MAN1A1 ENSGALG00000014878 1061 0.975 - - - - - - - 0.975 - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
99. PSMD3 ENSGALG00000033162 25615 0.974 - - - - 0.974 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
100. ACAT2 ENSGALG00000011659 12825 0.974 - - - - 0.974 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]

There are 639 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA