Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for BRE

Gene Name Gene ID Reads Annotation
BRE 10440 brain and reproductive organ-expressed (TNFRSF1A modulator), transcript variant X2











Genes with expression patterns similar to BRE

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. BRE 10440 9 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 brain and reproductive organ-expressed (TNFRSF1A modulator), transcript variant X2
2. TSSC4 ENSGALG00000006530 10413 1.763 - - - - - - 0.832 0.931 - - tumor suppressing subtransferable candidate 4 [Source:NCBI gene;Acc:423092]
3. ELOVL5 ENSGALG00000016314 18163 1.699 - - 0.821 - - - 0.878 - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
4. HOXA7 ENSGALG00000026989 6746 1.651 - - 0.854 - - - 0.797 - - - homeobox A7 [Source:NCBI gene;Acc:395290]
5. PSMA2 ENSGALG00000039387 23620 1.633 - - - - - - 0.778 0.855 - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
6. TSPAN6 ENSGALG00000006808 20063 1.628 - - 0.751 - - - 0.877 - - - tetraspanin 6 [Source:NCBI gene;Acc:422262]
7. SPCS3 ENSGALG00000010839 19106 1.624 - - 0.866 - - - 0.758 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
8. LMAN1 ENSGALG00000034821 12788 1.611 - - - - - - 0.726 0.885 - - lectin, mannose binding 1 [Source:NCBI gene;Acc:426849]
9. REXO2 ENSGALG00000035980 16319 1.597 - - 0.855 - - - 0.742 - - - RNA exonuclease 2 [Source:NCBI gene;Acc:419761]
10. CEPT1 ENSGALG00000000142 4219 1.584 - - 0.840 - - - 0.744 - - - choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
11. HNRNPLL ENSGALG00000008504 14719 1.579 - - 0.806 - - - 0.773 - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
12. PNRC2 ENSGALG00000004122 19228 1.577 - - - - - - 0.789 0.788 - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
13. HMGN1 ENSGALG00000016067 17375 1.547 - - 0.840 - - - 0.707 - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
14. RPLP0 ENSGALG00000023294 519985 1.541 - - - - - - 0.736 0.805 - - ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
15. GTF2H5 ENSGALG00000013733 12293 1.54 - - 0.715 - - - 0.825 - - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
16. ARFIP1 ENSGALG00000041361 7351 1.528 - - 0.750 - - - 0.778 - - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
17. SNAPC5 ENSGALG00000007695 4117 1.493 - - 0.791 - - - - 0.702 - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
18. PGS1 ENSGALG00000007181 3187 1.491 - - 0.769 - - - - 0.722 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
19. CHN1 ENSGALG00000009293 6415 1.47 - - 0.767 - - - - 0.703 - - chimerin 1 [Source:NCBI gene;Acc:429021]
20. FBXO9 ENSGALG00000016320 9600 1.441 - - 0.737 - - - 0.704 - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
21. PDHA1 ENSGALG00000016430 7070 1.431 - - 0.709 - - - 0.722 - - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
22. PDCL3 ENSGALG00000016772 14897 1.41 - - 0.704 - - - 0.706 - - - phosducin like 3 [Source:NCBI gene;Acc:418709]
23. CDC20 ENSGALG00000009971 11197 0.977 - - - - - - - 0.977 - - cell division cycle 20 [Source:NCBI gene;Acc:424563]
24. ISL1 ENSGALG00000014884 7666 0.967 - - - - - - - 0.967 - - ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
25. POLB ENSGALG00000040828 7462 0.96 - - - - - - - 0.960 - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
26. DDX1 ENSGALG00000016461 15157 0.954 - - - - - - - 0.954 - - DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
27. FNBP1 ENSGALG00000004088 1400 0.95 - - - - - - - 0.950 - - formin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17069]
28. TPRG1L ENSGALG00000001024 9809 0.922 - - - - - - - 0.922 - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
29. STAMBP ENSGALG00000042555 1362 0.916 - - 0.916 - - - - - - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
30. ATF7IP ENSGALG00000011814 1571 0.903 - - 0.903 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
31. MLLT3 ENSGALG00000015078 502 0.9 - - 0.900 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
32. RALGAPA2 240 0.9 - - 0.900 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
33. ENPP2 ENSGALG00000032746 6086 0.899 - - - - - - - 0.899 - - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
34. TRIT1 ENSGALG00000003851 1518 0.897 - - 0.897 - - - - - - - tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]
35. DAK DAK 13208 0.896 - - 0.896 - - - - - - -
36. ADK ENSGALG00000005057 199 0.895 - - 0.895 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
37. ATP8B4 ENSGALG00000002326 456 0.894 - - 0.894 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
38. TCTN2 ENSGALG00000023683 3596 0.894 - - 0.894 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
39. RECQL ENSGALG00000013174 1323 0.894 - - 0.894 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
40. WDR92 ENSGALG00000008760 3934 0.893 - - 0.893 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
41. LXR LXR 2599 0.893 - - 0.893 - - - - - - -
42. NGF ENSGALG00000002556 122 0.893 - - 0.893 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
43. TTPAL ENSGALG00000004244 2734 0.892 - - 0.892 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
44. TAF1B ENSGALG00000016437 2318 0.892 - - 0.892 - - - - - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
45. RAD54L2 ENSGALG00000003243 187 0.891 - - 0.891 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
46. SLC37A3 ENSGALG00000012849 836 0.89 - - 0.890 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
47. IFT81 ENSGALG00000003854 2534 0.889 - - 0.889 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
48. SLC3A1 ENSGALG00000009973 608 0.889 - - 0.889 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
49. TMEM242 ENSGALG00000013689 377 0.889 - - 0.889 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
50. RQCD1 RQCD1 110 0.888 - - 0.888 - - - - - - -
51. RFK ENSGALG00000033558 1364 0.888 - - 0.888 - - - - - - - riboflavin kinase, transcript variant X3
52. FAR-1 FAR-1 1855 0.888 - - 0.888 - - - - - - -
53. UEVLD ENSGALG00000006342 164 0.887 - - 0.887 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
54. TDRD6 48 0.887 - - 0.887 - - - - - - - tudor domain containing 6
55. ITGB4 ENSGALG00000002389 44 0.887 - - 0.887 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
56. MAPRE3 ENSGALG00000031726 191 0.887 - - 0.887 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
57. NACAD 679 0.887 - - 0.887 - - - - - - - NAC alpha domain containing, transcript variant X1
58. MRC2 ENSGALG00000000461 48 0.887 - - 0.887 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
59. AKAP10 ENSGALG00000004679 103 0.887 - - 0.887 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
60. FBXL5 ENSGALG00000014510 245 0.887 - - 0.887 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
61. ENSGALG00000028964 ENSGALG00000028964 46 0.887 - - 0.887 - - - - - - -
62. WAPAL WAPAL 625 0.886 - - 0.886 - - - - - - -
63. CDC14B ENSGALG00000012627 110 0.886 - - 0.886 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
64. LMNB2 ENSGALG00000000470 4364 0.885 - - 0.885 - - - - - - - lamin B2 [Source:NCBI gene;Acc:396222]
65. SZT2 ENSGALG00000028561 255 0.885 - - 0.885 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
66. TRIM13 ENSGALG00000017011 92 0.885 - - 0.885 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
67. FBXO45 ENSGALG00000037281 3936 0.885 - - 0.885 - - - - - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
68. PCYT1B 190 0.885 - - 0.885 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
69. RPS6KB1 ENSGALG00000005198 169 0.885 - - 0.885 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
70. XRCC6 ENSGALG00000011932 2302 0.884 - - 0.884 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 6 [Source:NCBI gene;Acc:395767]
71. MED12 ENSGALG00000036322 814 0.884 - - 0.884 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
72. ITM2B ENSGALG00000016996 1112 0.884 - - 0.884 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
73. DBN1 ENSGALG00000033405 216 0.884 - - 0.884 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
74. CHAMP1 ENSGALG00000016813 508 0.884 - - 0.884 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
75. OSGIN2 ENSGALG00000042840 83 0.884 - - 0.884 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
76. ABCE1 ENSGALG00000009961 958 0.884 - - 0.884 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
77. PTDSS2 ENSGALG00000004300 682 0.884 - - 0.884 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
78. PRUNE PRUNE 452 0.882 - - 0.882 - - - - - - -
79. SOBP ENSGALG00000043047 147 0.882 - - 0.882 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
80. ENSGALG00000004703 ENSGALG00000004703 112 0.882 - - 0.882 - - - - - - -
81. TUBGCP3 ENSGALG00000016836 332 0.882 - - 0.882 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
82. ENSGALG00000020103 ENSGALG00000020103 64 0.882 - - 0.882 - - - - - - -
83. U4 U4 69 0.882 - - 0.882 - - - - - - -
84. F2R ENSGALG00000014983 106 0.882 - - 0.882 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
85. ARID3A ENSGALG00000026231 867 0.881 - - 0.881 - - - - - - - AT-rich interaction domain 3A [Source:HGNC Symbol;Acc:HGNC:3031]
86. ENSGALG00000002020 ENSGALG00000002020 183 0.881 - - 0.881 - - - - - - -
87. BBX ENSGALG00000015353 1281 0.881 - - 0.881 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
88. GTF2H2 ENSGALG00000002399 2361 0.881 - - 0.881 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
89. GFER ENSGALG00000005579 1367 0.881 - - 0.881 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
90. CLEC16A ENSGALG00000007167 66 0.881 - - 0.881 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
91. NXPE3 ENSGALG00000015344 111 0.881 - - 0.881 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
92. PIGK ENSGALG00000009015 7942 0.881 - - 0.881 - - - - - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
93. L3MBTL3 ENSGALG00000034030 113 0.881 - - 0.881 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
94. ST14 ENSGALG00000001331 1655 0.88 - - 0.880 - - - - - - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
95. ABCC3 ENSGALG00000007522 340 0.88 - - 0.880 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
96. ARRDC4 ENSGALG00000007012 1039 0.88 - - 0.880 - - - - - - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
97. SMOC2 ENSGALG00000011205 340 0.878 - - 0.878 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
98. SELM SELM 6366 0.878 - - 0.878 - - - - - - -
99. GGT7 ENSGALG00000001062 476 0.878 - - 0.878 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
100. ENSGALG00000008689 ENSGALG00000008689 232 0.878 - - 0.878 - - - - - - -

There are 677 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA