Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for BRD3

Gene Name Gene ID Reads Annotation
BRD3 ENSGALG00000002682 5983 bromodomain containing 3 [Source:HGNC Symbol;Acc:HGNC:1104]











Genes with expression patterns similar to BRD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. BRD3 ENSGALG00000002682 5983 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 bromodomain containing 3 [Source:HGNC Symbol;Acc:HGNC:1104]
2. FAM172A ENSGALG00000014661 10565 0.842 - - - - - - - - - 0.842 family with sequence similarity 172 member A [Source:NCBI gene;Acc:427109]
3. ADIPOR2 ENSGALG00000035533 6523 0.808 - - - - - - - - - 0.808 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
4. TMEM115 ENSGALG00000026965 13050 0.8 - - - - - - - - - 0.800 transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
5. ATL1 ENSGALG00000012339 3789 0.795 - - - - - - - - 0.795 - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
6. NR2F2 ENSGALG00000007000 4911 0.79 - - 0.790 - - - - - - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
7. PRDM4 ENSGALG00000012619 876 0.784 - - - - - - - - - 0.784 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
8. MBD4 ENSGALG00000020747 3644 0.778 - - - - - - - 0.778 - - methyl-CpG binding domain 4, DNA glycosylase [Source:NCBI gene;Acc:395428]
9. FAM193A ENSGALG00000015667 3075 0.775 - - - - - - - - - 0.775 family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
10. AFG3L2 ENSGALG00000013853 1138 0.774 - - - - - - - - - 0.774 AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
11. MAN1A2 451 0.773 - - - - - - - - - 0.773 mannosidase alpha class 1A member 2
12. GLRX ENSGALG00000027483 217 0.771 - - - - - - - - 0.771 - glutaredoxin [Source:NCBI gene;Acc:396069]
13. COL13A1 ENSGALG00000004286 957 0.77 - - - - - - 0.770 - - - collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]
14. MRPS10 ENSGALG00000009890 9157 0.768 - - - - - - - - - 0.768 mitochondrial ribosomal protein S10 [Source:NCBI gene;Acc:421385]
15. GPR180 ENSGALG00000016897 1545 0.767 - - - - - - - - 0.767 - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
16. NUDC ENSGALG00000000895 17844 0.765 - - - - - - - - - 0.765 nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
17. N-RAS N-RAS 5787 0.763 - - - - - - - - 0.763 -
18. ALDH7A1 ENSGALG00000008229 5891 0.762 - - - - - - - - - 0.762 aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
19. BSG ENSGALG00000001328 37947 0.76 - - - - - - - - - 0.760 basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
20. WDR4 ENSGALG00000016187 1713 0.759 - - - - - - 0.759 - - - Gallus gallus WD repeat domain 4 (WDR4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321598]
21. QKI ENSGALG00000011555 1275 0.757 - - - - - - - - - 0.757 QKI, KH domain containing RNA binding [Source:NCBI gene;Acc:374204]
22. LACTB2 ENSGALG00000038745 3460 0.755 - - - - - - - - - 0.755 lactamase beta 2 [Source:NCBI gene;Acc:420178]
23. CAMSAP2 ENSGALG00000002145 6109 0.752 - - - - - - - - - 0.752 calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
24. FTD FTD 3041 0.752 - - - - - - - - - 0.752
25. KHDRBS1 ENSGALG00000003272 4249 0.752 - - - - - - 0.752 - - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
26. ARPC5L ENSGALG00000001014 5642 0.751 - - - - - - 0.751 - - - actin related protein 2/3 complex subunit 5 like [Source:HGNC Symbol;Acc:HGNC:23366]
27. N4BP2L2 857 0.748 - - - - - - 0.748 - - - NEDD4 binding protein 2 like 2, transcript variant X7
28. SSRP1 ENSGALG00000007520 18849 0.748 - - - - - - - 0.748 - - structure specific recognition protein 1 [Source:NCBI gene;Acc:396509]
29. VCPKMT ENSGALG00000012269 2107 0.743 - - - - - - - - 0.743 - valosin containing protein lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:20352]
30. CP ENSGALG00000030773 119 0.743 - - - - - - - - - 0.743 ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
31. PCDHGC3 ENSGALG00000028565 18583 0.742 - - - - - - - 0.742 - - Gallus gallus protocadherin gamma subfamily A, 2 (PCDHGA2), mRNA. [Source:RefSeq mRNA;Acc:NM_001245037]
32. ATG10 ENSGALG00000027714 1100 0.742 - - - - - - - - 0.742 - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
33. APP ENSGALG00000015770 9438 0.741 - - - - - - - - 0.741 - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
34. EXOSC1 ENSGALG00000039917 5259 0.741 - - - - - - - - - 0.741 exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
35. ELF1 ENSGALG00000016947 2769 0.74 - - - - - - 0.740 - - - E74 like ETS transcription factor 1 [Source:NCBI gene;Acc:418828]
36. ANAPC2 ENSGALG00000008625 8822 0.738 - - - - - - - - - 0.738 anaphase promoting complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:19989]
37. EPHA5 ENSGALG00000011680 906 0.738 - - - - - - 0.738 - - - EPH receptor A5 [Source:NCBI gene;Acc:395997]
38. MEX3A ENSGALG00000014016 3692 0.737 - - - - - - - 0.737 - - mex-3 RNA binding family member A [Source:HGNC Symbol;Acc:HGNC:33482]
39. PPIB ENSGALG00000002210 46778 0.736 - - - - - - - - - 0.736 peptidylprolyl isomerase B (cyclophilin B) [Source:NCBI gene;Acc:396447]
40. KDELC2 ENSGALG00000017158 479 0.735 - - - - - - - - 0.735 - KDEL motif containing 2 [Source:HGNC Symbol;Acc:HGNC:28496]
41. MIPEP ENSGALG00000017118 8666 0.735 - - - - - - - - - 0.735 mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
42. SQSTM1 ENSGALG00000035804 2238 0.735 - - - - - - - 0.735 - - sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]
43. UBL3 ENSGALG00000017084 7417 0.732 - - - - - - - - - 0.732 ubiquitin like 3 [Source:NCBI gene;Acc:418921]
44. ENSGALG00000012451 ENSGALG00000012451 7912 0.731 - - - - - - - - 0.731 -
45. ALMS1 ENSGALG00000044620 570 0.731 - - - - - - - - - 0.731 ALMS1, centrosome and basal body associated protein, transcript variant X1
46. RAP1A ENSGALG00000001476 5287 0.731 - - - - - - 0.731 - - - RAP1A, member of RAS oncogene family
47. SF3A3 ENSGALG00000001540 9664 0.73 - - - - - - - - - 0.730 splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
48. CPSF2 ENSGALG00000010783 5236 0.73 - - - - - - - - - 0.730 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
49. GSK3B ENSGALG00000014977 7950 0.729 - - - - - - - 0.729 - - glycogen synthase kinase 3 beta [Source:HGNC Symbol;Acc:HGNC:4617]
50. PDPK1 ENSGALG00000006418 13412 0.729 - - - - - - - - 0.729 - 3-phosphoinositide dependent protein kinase 1 [Source:NCBI gene;Acc:416588]
51. SENP6 ENSGALG00000015901 8013 0.728 - - - - - - 0.728 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
52. MTERFD1 MTERFD1 3640 0.728 - - - - - - - - - 0.728
53. PLXNA2 ENSGALG00000001264 2413 0.728 - - - - - - 0.728 - - - plexin A2 [Source:HGNC Symbol;Acc:HGNC:9100]
54. 5 5 4209 0.728 - - - - - - - - - 0.728
55. EHHADH ENSGALG00000006680 798 0.728 - - - - - - - - 0.728 - enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3247]
56. KIAA1109 833 0.727 - - - - - - - - 0.727 - KIAA1109, transcript variant X11
57. SNX7 ENSGALG00000005478 4736 0.726 - - - - - - - - 0.726 - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
58. UNC5B ENSGALG00000004569 1475 0.726 - - - - - - - - - 0.726 unc-5 netrin receptor B [Source:NCBI gene;Acc:423716]
59. ANKRD11 ENSGALG00000006222 12327 0.726 - - - - - - - - - 0.726 ankyrin repeat domain 11, transcript variant X2
60. CELF1 ENSGALG00000008097 4717 0.726 - - - - - - - 0.726 - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]
61. GLI2 ENSGALG00000011630 3347 0.725 - - - - - - 0.725 - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
62. MRPS14 ENSGALG00000030028 1987 0.725 - - - - - - - - 0.725 - mitochondrial ribosomal protein S14 [Source:NCBI gene;Acc:424436]
63. MTRF1L ENSGALG00000013609 1581 0.724 - - - - - - - 0.724 - - mitochondrial translational release factor 1 like [Source:HGNC Symbol;Acc:HGNC:21051]
64. NUPL2 ENSGALG00000010942 2442 0.724 - - - - - - - 0.724 - - nucleoporin like 2 [Source:NCBI gene;Acc:420614]
65. ZDHHC7 ENSGALG00000042522 1774 0.724 - - - - - - 0.724 - - - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
66. IFT46 ENSGALG00000007438 4094 0.723 - - - - - - 0.723 - - - intraflagellar transport 46, transcript variant X1
67. CENPI ENSGALG00000005038 2608 0.722 - - - - - - 0.722 - - - centromere protein I [Source:NCBI gene;Acc:395207]
68. AMFR ENSGALG00000003107 6560 0.721 - - - - - - - 0.721 - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
69. FANCB ENSGALG00000016569 1193 0.721 - - - - - - - - - 0.721 FA complementation group B [Source:NCBI gene;Acc:418628]
70. SMARCC1 ENSGALG00000032642 4842 0.72 - - - - - - - - - 0.720 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
71. UBQLN4 ENSGALG00000042214 15829 0.72 - - - - - - 0.720 - - - ubiquilin 4 [Source:NCBI gene;Acc:426353]
72. HMGXB4 ENSGALG00000044768 6005 0.719 - - - - - - 0.719 - - - HMG-box containing 4 [Source:HGNC Symbol;Acc:HGNC:5003]
73. COX5A ENSGALG00000014121 55281 0.719 - - - - - - - - - 0.719 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
74. QDPR ENSGALG00000030070 6953 0.719 - - - - - - - - - 0.719 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
75. FBXO34 ENSGALG00000032563 656 0.718 - - - - - - - - 0.718 - F-box protein 34 [Source:NCBI gene;Acc:423554]
76. HOTAIRM1 HOTAIRM1 4335 0.718 - - - - - - - - - 0.718
77. YAF2 ENSGALG00000009540 8452 0.718 - - - - - - - - - 0.718 YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
78. HM13 ENSGALG00000006207 8354 0.717 - - - - - - - - - 0.717 histocompatibility minor 13 [Source:HGNC Symbol;Acc:HGNC:16435]
79. DBI ENSGALG00000012112 6910 0.716 - - - - - - 0.716 - - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
80. MED7 ENSGALG00000003870 4244 0.714 - - - - - - - - 0.714 - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
81. IFT88 1241 0.714 - - - - - - 0.714 - - - intraflagellar transport 88, transcript variant X3
82. ENSGALG00000014171 ENSGALG00000014171 10383 0.714 - - - - - - - - - 0.714
83. CAPN15 ENSGALG00000002018 3353 0.713 - - - - - - - 0.713 - - calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
84. MCPH1 ENSGALG00000016332 2097 0.713 - - - - - - - - - 0.713 microcephalin 1 [Source:NCBI gene;Acc:100125976]
85. GPR27 ENSGALG00000027091 8111 0.713 - - - - - - 0.713 - - - G protein-coupled receptor 27
86. TMEM128 ENSGALG00000014992 6567 0.713 - - - - - - - - - 0.713 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
87. TXNDC11 ENSGALG00000003154 2224 0.713 - - - - - - - - - 0.713 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
88. RNH1 ENSGALG00000006904 14542 0.712 - - - - - - 0.712 - - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
89. SMDT1 ENSGALG00000011897 9360 0.71 - - - - - - - - - 0.710 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
90. RBM5 30998 0.71 - - - - - - - - - 0.710 RNA binding motif protein 5, transcript variant X1
91. STRADA ENSGALG00000000550 6912 0.71 - - - - - - - - - 0.710 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
92. WWC1 ENSGALG00000001826 4666 0.71 - - - - - - - 0.710 - - WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
93. GPX8 ENSGALG00000026704 4497 0.709 - - - - - - - - - 0.709 glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
94. BRSK2 ENSGALG00000006681 158 0.708 - - - - - - - - 0.708 - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
95. TCERG1 ENSGALG00000007528 6346 0.708 - - - - - - 0.708 - - - transcription elongation regulator 1 [Source:HGNC Symbol;Acc:HGNC:15630]
96. TOP3A ENSGALG00000005028 535 0.708 - - - - - - 0.708 - - - DNA topoisomerase III alpha [Source:NCBI gene;Acc:416517]
97. CGNL1 ENSGALG00000004294 1177 0.707 - - - - - - - 0.707 - - cingulin like 1 [Source:HGNC Symbol;Acc:HGNC:25931]
98. LYN ENSGALG00000042321 3539 0.707 - - - - - - - - 0.707 - LYN proto-oncogene, Src family tyrosine kinase [Source:NCBI gene;Acc:421127]
99. PDLIM7 ENSGALG00000026159 4700 0.707 - - 0.707 - - - - - - - PDZ and LIM domain 7 [Source:NCBI gene;Acc:416362]
100. CRCP ENSGALG00000002587 8809 0.706 - - - - - - - - - 0.706 CGRP receptor component [Source:NCBI gene;Acc:396022]

There are 20 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA